CX308791
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308791 vs. ExPASy Swiss-Prot
Match: BPS1_ARATH (Protein BPS1, chloroplastic OS=Arabidopsis thaliana GN=BPS1 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 2.111e-38 Identity = 87/158 (55.06%), Postives = 113/158 (71.52%), Query Frame = 3 Query: 9 SLDLPKVKNSAKGKVLMRAMYGVKVLTVFVCSIFAAAFSGSAKNLLELNVSDTLPWAPAFSALQANVNAEVRNILSSGRAAVLNELEAVDGSVKKLYEVI-QNEVDTVEEELLQKSVLDLGKRADNFSQGLDHLTKAVDGFFKIVLSGRDALLCNLRA 479 +L+LPKVKNSAKGKVLMRA+YGVKV T+++ +FAAAFSGS++NL+ L VS+ LPWA +F +Q +NAE++NI S VL ELEAV VKKLY I Q +D + + L+ SV +L S G+D ++K VD FFKI+LSGRD LL NLR+ Sbjct: 177 TLNLPKVKNSAKGKVLMRALYGVKVKTLYISGVFAAAFSGSSQNLMYLTVSNELPWAQSFMEVQNTMNAEIKNIFLSDGLTVLKELEAVASGVKKLYPAIQQGSIDPISLQPLKDSVTEL-------SNGIDLVSKEVDCFFKILLSGRDTLLENLRS 327
BLAST of CX308791 vs. ExPASy Swiss-Prot
Match: U496D_ORYSJ (UPF0496 protein 4 OS=Oryza sativa subsp. japonica GN=Os10g0513300 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.052e-21 Identity = 57/132 (43.18%), Postives = 79/132 (59.85%), Query Frame = 3 Query: 9 SLDLPKVKNSAKGKVLMRAMYGVKVLTVFVCSIFAAAFSGSAKNLLELNVSDTLPWAPAFSALQANVNAEVRNILSSGRAAVLNELEAVDGSVKKLYEV------------IQNEVDTVEEELLQKSVLDLG 368 +L L KVKNSAKGKVLMRA+YG++ +TVFVCSIF A SGS K L+EL+V + W+ AF+ L V+ E+ LS G A + ELE V+ ++L+ + + N V EEE++ S+ G Sbjct: 181 NLSLMKVKNSAKGKVLMRALYGIESVTVFVCSIFVAVLSGSPKPLVELHVPEKFGWSQAFNDLHTAVSEELTRQLSGGSVAAVKELEEVEACARRLHVLASTSQLEEEAANLANAVSHTEEEVMSDSIAQEG 312
BLAST of CX308791 vs. ExPASy Swiss-Prot
Match: U496D_ORYSI (UPF0496 protein 4 OS=Oryza sativa subsp. indica GN=OsI_033149 PE=3 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 1.795e-21 Identity = 56/132 (42.42%), Postives = 79/132 (59.85%), Query Frame = 3 Query: 9 SLDLPKVKNSAKGKVLMRAMYGVKVLTVFVCSIFAAAFSGSAKNLLELNVSDTLPWAPAFSALQANVNAEVRNILSSGRAAVLNELEAVDGSVKKLYEV------------IQNEVDTVEEELLQKSVLDLG 368 +L L KVKNS KGKVLMRA+YG++ +TVFVCSIF A SGS K L+EL+V + W+ AF+ L V+ E+ L+ G A + ELE V+ K+L+ + + N V EEE++ S++ G Sbjct: 181 NLSLMKVKNSVKGKVLMRALYGIESVTVFVCSIFVAVLSGSPKPLVELHVPEKFGWSQAFNDLHTAVSEELTRQLAGGSVAAVKELEEVEACAKRLHVLASTSQLEEEAANLANAVSHTEEEVMSDSIVQEG 312 The following BLAST results are available for this feature:
BLAST of CX308791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX308791 ID=CX308791; Name=CX308791; organism=Citrus clementina; type=EST; length=481bpback to top |