CX308857

Overview
NameCX308857
Unique NameCX308857
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length258
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX308857 vs. ExPASy Swiss-Prot
Match: SEC_ARATH (Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC OS=Arabidopsis thaliana GN=SEC PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.158e-13
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = -2 
Query:  138 KGSLNEAAQCCRQALALNPLLVDAHSNLGNLMKAQGLVQE 257
            KG L+EA QCC+QAL+LNPLLVDAHSNLGNLMKAQGL+ E
Sbjct:  168 KGRLSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHE 207
The following BLAST results are available for this feature:
BLAST of CX308857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SEC_ARATH8.158e-1382.50Probable UDP-N-acetylglucosamine--peptide N-acetyl... [more]
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Properties
Property NameValue
Genbank descriptionC21004F06Rv AbsLeaSub1 Citrus clementina cDNA clone C21004F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX308857 ID=CX308857; Name=CX308857; organism=Citrus clementina; type=EST; length=258bp
ATCAGCATATAATAGCCAATGGTAGCTGAAGGGCATGAAAACTGTAATGA
ACTGAACTTTGTAGCCCAAGATTCCAAATCAAGGTCTGTATCATGCAAAG
AGAGATAAATGGGAAATCAAAAATGCACAGCACTTACTTCTTGCACTAAT
CCTTGTGCCTTCATTAGATTCCCCAGATTGCTGTGAGCATCAACCAATAG
GGGATTTAGAGCAAGTGCCTGACGACAGCACTGTGCTGCTTCATTAAGAC
TCCCTTTT
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