CX308908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308908 vs. ExPASy Swiss-Prot
Match: COB22_ARATH (Coatomer subunit beta'-2 OS=Arabidopsis thaliana GN=At1g52360 PE=2 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 2.160e-70 Identity = 125/132 (94.70%), Postives = 130/132 (98.48%), Query Frame = 3 Query: 147 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSSEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGW 542 MPLRLEIKRKLAQRSERVKSVDLHP+EPWILASLYSGT+CIWNYQ+Q MAKS EVTELPVRSAKFVARKQWVVAGADDM+IRVYNYNTMDKVKVFEAH+DYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGW Sbjct: 1 MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPVRSAKFVARKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGW 132
BLAST of CX308908 vs. ExPASy Swiss-Prot
Match: COB21_ARATH (Coatomer subunit beta'-1 OS=Arabidopsis thaliana GN=At1g79990 PE=2 SV=2) HSP 1 Score: 263.077 bits (671), Expect = 6.283e-70 Identity = 122/133 (91.73%), Postives = 129/133 (96.99%), Query Frame = 3 Query: 147 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSSEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWM 545 MPLRLEIKRK AQRSERVKSVDLHP+EPWILASLYSGT+CIWNYQ+QTM KS +VTELPVRSAKF+ARKQWVVAGADDMFIRVYNYNTMDK+KVFEAH DYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGW+ Sbjct: 1 MPLRLEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWL 133
BLAST of CX308908 vs. ExPASy Swiss-Prot
Match: COB21_ORYSJ (Coatomer subunit beta'-1 OS=Oryza sativa subsp. japonica GN=Os06g0143900 PE=2 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 1.828e-69 Identity = 122/133 (91.73%), Postives = 130/133 (97.74%), Query Frame = 3 Query: 147 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSSEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWM 545 MPLRLEIKRK AQRSERVKSVDLHP+EPWIL+SLYSG+VCIW+YQSQTM KS EV+ELPVRSAKF++RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW+KGWM Sbjct: 1 MPLRLEIKRKFAQRSERVKSVDLHPTEPWILSSLYSGSVCIWDYQSQTMVKSFEVSELPVRSAKFISRKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWDKGWM 133
BLAST of CX308908 vs. ExPASy Swiss-Prot
Match: COB22_ORYSJ (Coatomer subunit beta'-2 OS=Oryza sativa subsp. japonica GN=Os02g0209100 PE=2 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 5.319e-69 Identity = 120/133 (90.23%), Postives = 130/133 (97.74%), Query Frame = 3 Query: 147 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSSEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWM 545 MPLRL+IKRKLAQRSERVKSVDLHP+EPWIL+SLYSG+VCIWNYQ+QTM KS EVTELPVRS+KF+ARKQW+VAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPT P+VLSSSDDMLIKLWDW+KGWM Sbjct: 1 MPLRLDIKRKLAQRSERVKSVDLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSSKFIARKQWIVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPFVLSSSDDMLIKLWDWDKGWM 133
BLAST of CX308908 vs. ExPASy Swiss-Prot
Match: COB23_ARATH (Coatomer subunit beta'-3 OS=Arabidopsis thaliana GN=At3g15980 PE=2 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 2.640e-68 Identity = 120/132 (90.91%), Postives = 127/132 (96.21%), Query Frame = 3 Query: 147 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSSEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGW 542 MPLRL+IKRK AQRSERVKSVDLHP+EPWILASLYSGTVCIWNYQ+QT+ KS EVTELPVRSAKF+ RKQWVVAGADDM+IRVYNYNTMDKVKVFEAH+DYIRCVAVHPTLPYVLSSSDDMLIKLWDWE GW Sbjct: 1 MPLRLDIKRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGW 132
BLAST of CX308908 vs. ExPASy Swiss-Prot
Match: COB23_ORYSJ (Putative coatomer subunit beta'-3 OS=Oryza sativa subsp. japonica GN=Os02g0209000 PE=3 SV=2) HSP 1 Score: 257.299 bits (656), Expect = 3.448e-68 Identity = 119/133 (89.47%), Postives = 128/133 (96.24%), Query Frame = 3 Query: 147 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSSEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWM 545 MPLRL+IKRKLAQRSER KSVDLHP+EPWIL+SLYSG+VCIWNYQ+QTM KS EVTELPVRS+KF+ RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPT P+VLSSSDDMLIKLWDW+KGWM Sbjct: 1 MPLRLDIKRKLAQRSERAKSVDLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSSKFITRKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPFVLSSSDDMLIKLWDWDKGWM 133
BLAST of CX308908 vs. ExPASy Swiss-Prot
Match: COPB2_PONAB (Coatomer subunit beta' OS=Pongo abelii GN=COPB2 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 2.738e-57 Identity = 96/132 (72.73%), Postives = 121/132 (91.67%), Query Frame = 3 Query: 147 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSSEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGW 542 MPLRL+IKRKL RS+RVKSVDLHP+EPW+LASLY+G+VC+WN+++QT+ K+ EV +LPVR+AKFVARK WVV GADDM IRV+NYNT+++V +FEAH+DYIRC+AVHPT P++L+SSDDMLIKLWDW+K W Sbjct: 1 MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKW 132
BLAST of CX308908 vs. ExPASy Swiss-Prot
Match: COPB2_MOUSE (Coatomer subunit beta' OS=Mus musculus GN=Copb2 PE=2 SV=2) HSP 1 Score: 221.09 bits (562), Expect = 2.738e-57 Identity = 96/132 (72.73%), Postives = 121/132 (91.67%), Query Frame = 3 Query: 147 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSSEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGW 542 MPLRL+IKRKL RS+RVKSVDLHP+EPW+LASLY+G+VC+WN+++QT+ K+ EV +LPVR+AKFVARK WVV GADDM IRV+NYNT+++V +FEAH+DYIRC+AVHPT P++L+SSDDMLIKLWDW+K W Sbjct: 1 MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKW 132
BLAST of CX308908 vs. ExPASy Swiss-Prot
Match: COPB2_MACFA (Coatomer subunit beta' OS=Macaca fascicularis GN=COPB2 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 2.738e-57 Identity = 96/132 (72.73%), Postives = 121/132 (91.67%), Query Frame = 3 Query: 147 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSSEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGW 542 MPLRL+IKRKL RS+RVKSVDLHP+EPW+LASLY+G+VC+WN+++QT+ K+ EV +LPVR+AKFVARK WVV GADDM IRV+NYNT+++V +FEAH+DYIRC+AVHPT P++L+SSDDMLIKLWDW+K W Sbjct: 1 MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKW 132
BLAST of CX308908 vs. ExPASy Swiss-Prot
Match: COPB2_HUMAN (Coatomer subunit beta' OS=Homo sapiens GN=COPB2 PE=1 SV=2) HSP 1 Score: 221.09 bits (562), Expect = 2.738e-57 Identity = 96/132 (72.73%), Postives = 121/132 (91.67%), Query Frame = 3 Query: 147 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSSEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGW 542 MPLRL+IKRKL RS+RVKSVDLHP+EPW+LASLY+G+VC+WN+++QT+ K+ EV +LPVR+AKFVARK WVV GADDM IRV+NYNT+++V +FEAH+DYIRC+AVHPT P++L+SSDDMLIKLWDW+K W Sbjct: 1 MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKW 132 The following BLAST results are available for this feature:
BLAST of CX308908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308908 ID=CX308908; Name=CX308908; organism=Citrus clementina; type=EST; length=545bpback to top |