CX308927

Overview
NameCX308927
Unique NameCX308927
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length267
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig556 contig Ccv1_Contig556:17..283. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX308927 vs. ExPASy Swiss-Prot
Match: PR4_PHAVU (Wound-induced basic protein OS=Phaseolus vulgaris GN=PR4 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.572e-16
Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = -2 
Query:   48 MIYDVNSPLSRSFLSQKGGASDKRKMEEQRPKEQRPKTNENKPVMTE 188
            MIYDVNSPL RSFLSQKGG+SDKRK EEQ+PKE RPK +ENKP+MTE
Sbjct:    1 MIYDVNSPLFRSFLSQKGGSSDKRKTEEQKPKEHRPKASENKPIMTE 47
The following BLAST results are available for this feature:
BLAST of CX308927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PR4_PHAVU1.572e-1682.98Wound-induced basic protein OS=Phaseolus vulgaris ... [more]
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Properties
Property NameValue
Genbank descriptionC21006A03Rv AbsLeaSub1 Citrus clementina cDNA clone C21006A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX308927 ID=CX308927; Name=CX308927; organism=Citrus clementina; type=EST; length=267bp
TACTTCTATCTCATCACTGAAGCATTACAAGCAAAACGCAACTCTCACTC
TGTCATGACAGGCTTGTTCTCATTTGTTTTGGGTCTTTGTTCTTTTGGCC
TTTGCTCTTCCATTTTCCTCTTGTCAGAAGCGCCGCCCTTCTGGCTGAGG
AAGGAACGGGAGAGAGGAGAGTTCACGTCGTAGATCATTGTTGATTATGA
ATTATCACCGTAGGATTCCTGTATCGGAAAAAGAAACCCTAGTTCCGTTT
TCGTTTTAATTTCCCCG
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