CX308960

Overview
NameCX308960
Unique NameCX308960
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length228
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX308960 vs. ExPASy Swiss-Prot
Match: DHBK_SOLLC (Putative 3,4-dihydroxy-2-butanone kinase OS=Solanum lycopersicum GN=DHBK PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.569e-27
Identity = 59/75 (78.67%), Postives = 61/75 (81.33%), Query Frame = -2
Query:    3 EVTIXXXXXXXVNLRDRLNEWDSKVGDGDCGSTMYRGATAILEDKKKYYPLNDAAETVNEIGASIRRVMGGTSGI 227
            E  I       VNLRD LNEWD+KVGDGDCGSTM+RGA AILED KKYYPLND AETVNEIGASI RVMGGTSGI
Sbjct:  384 ETAIEAAATEVVNLRDNLNEWDNKVGDGDCGSTMFRGAVAILEDMKKYYPLNDPAETVNEIGASIGRVMGGTSGI 458          
The following BLAST results are available for this feature:
BLAST of CX308960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DHBK_SOLLC7.569e-2778.67Putative 3,4-dihydroxy-2-butanone kinase OS=Solanu... [more]
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Properties
Property NameValue
Genbank descriptionC21006E07Rv AbsLeaSub1 Citrus clementina cDNA clone C21006E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX308960 ID=CX308960; Name=CX308960; organism=Citrus clementina; type=EST; length=228bp
AAGATTCCACTTGTTCCACCCATAACTCTCCTAATAGAAGCTCCAATTTC
ATTCACTGTTTCGGCAGCATCGTTCAAAGGATAATACTTTTTCTTGTCCT
CTAGAATTGCTGTTGCACCTCTATACATTGTTGACCCACAGTCACCATCA
CCAACTTTGCTATCCCATTCATTCAATCTATCCCTAAGATTGACAACCGC
TTCTGCTGCTGCTTCAATAGTCACCTCA
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