CX309021

Overview
NameCX309021
Unique NameCX309021
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length599
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC78_ARATH (NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2)

HSP 1 Score: 260.381 bits (664), Expect = 5.027e-69
Identity = 115/176 (65.34%), Postives = 142/176 (80.68%), Query Frame = -3
Query:   37 TSLPPGFRFHPTDVELIKYYLKRKVMGRKFGFEAIAEVDIYKHAPWDLPDKSSLRSGDLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPVQYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYRIDEPGLSERGVVQDAYVLCIVFQKDGPGPRNGAQYGAPFREEDWEND 564
            TSL PGFRFHPTD EL++YYLKRKV  + F F+AI+  DIYK  PWDLPDKS L+S DL+WYFF   +KKY+NG++ NRATE GYWKTTGKDR ++  + VVGM KTLV+H+G+APRG+RT+WVMHEYR+ +  L + GV Q+AYVLC +FQK G GP+NG QYGAP+ EE+WE D
Sbjct:    7 TSLAPGFRFHPTDEELVRYYLKRKVCNKPFKFDAISVTDIYKSEPWDLPDKSKLKSRDLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKGRAPRGERTNWVMHEYRLSDEDLKKAGVPQEAYVLCRIFQKSGTGPKNGEQYGAPYLEEEWEED 182          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC74_ORYSJ (NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 6.389e-48
Identity = 86/159 (54.09%), Postives = 111/159 (69.81%), Query Frame = -3
Query:   82 LPPGFRFHPTDVELIKYYLKRKVMGRKFGFEAIAEVDIYKHAPWDLPDKSSLRSGDLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPVQYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYRIDEPGLSERGVVQDAYVLCIVFQKDGPGPRNG 558
            LPPGF FHP D ELI +YLK+K+ G+K  +E I EVDIYKH PWDLP K  + + D KW+FF  R++KY NG+R NRAT  GYWK+TGKDR ++   + +G  KTLVFH G+ P G RT+W+MHEY IDE        ++DAYVLC + +++   P NG
Sbjct:    9 LPPGFGFHPKDTELISHYLKKKIHGQKIEYEIIPEVDIYKHEPWDLPAKCDVPTQDNKWHFFAARDRKYPNGSRSNRATVAGYWKSTGKDRAIKMGKQTIGTKKTLVFHEGRPPTGRRTEWIMHEYYIDERECQACPDMKDAYVLCRITKRNDWIPGNG 167          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.167e-41
Identity = 81/178 (45.51%), Postives = 109/178 (61.24%), Query Frame = -3
Query:   40 MGKTSLPPGFRFHPTDVELIKYYLKRKVMGRKFGFEAIAEVDIYKHAPWDLPDKSSLRSGDLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPVQYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYRIDEPGLSERGVVQDAYVLCIVFQKDGPGPRNGAQYGAPFREEDWEN 573
            + + SLPPGFRF+PTD EL+  YL RKV G  F  + I ++D+YK  PWDLP K+    G+ +WYFF PR++KY NG+R NR    GYWK TG D+ +  +   VG+ K LVF+ GKAP+G +T+W+MHEYR+ E   S      D +VLC +++K     R         REE   N
Sbjct:    9 LAQLSLPPGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLYKFDPWDLPSKALF--GEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFYAGKAPKGTKTNWIMHEYRLIEHSRSHGSSKLDDWVLCRIYKKTSGSQRQAVTPVQACREEHSTN 184          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC55_ARATH (NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 9.880e-41
Identity = 76/156 (48.72%), Postives = 102/156 (65.38%), Query Frame = -3
Query:  106 MGKTSLPPGFRFHPTDVELIKYYLKRKVMGRKFGFEAIAEVDIYKHAPWDLPDKSSLRSGDLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPVQYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYRIDEPGLSERGVVQDAYVLCIVFQK 573
            + + SLPPGFRF+PTD EL+  YL RK  G  F  + IAE+D+YK  PW LP K+    G+ +WYFF PR++KY NG+R NR    GYWK TG D+ +      VG+ K LVF+ GKAP+G +T+W+MHEYR+ EP         D +VLC +++K
Sbjct:    9 LAQLSLPPGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLPSKALF--GEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKK 162          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC29_ARATH (NAC domain-containing protein 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 9.880e-41
Identity = 83/182 (45.60%), Postives = 113/182 (62.09%), Query Frame = -3
Query:   34 KTSLPPGFRFHPTDVELIKYYLKRKVMGRKFGFEAIAEVDIYKHAPWDLPDKSSLRSGDLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPVQYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYRIDE---PGLSERGVVQ-DAYVLCIVFQKDGPGPRNGAQYGAPFREEDWENDE 567
            +++LPPGFRFHPTD ELI YYL+ + M +      I EVDIYK  PW LP+K+    G+ +WYFF PRE+KY NG R NRA   GYWK TG D+ +   +  VG+ K LVF++G+ P+G +TDW+MHEYR+ +         G ++ D +VLC +++K G       Q G  F +E    DE
Sbjct:    6 QSTLPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEF--GENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGVKKALVFYKGRPPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKRGASKLLNEQEG--FMDEVLMEDE 183          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC19_ARATH (NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.290e-40
Identity = 76/152 (50.00%), Postives = 102/152 (67.11%), Query Frame = -3
Query:  106 SLPPGFRFHPTDVELIKYYLKRKVMGRKFGFEAIAEVDIYKHAPWDLPDKSSLRSGDLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPVQYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYRIDEPGLSERGVVQDAYVLCIVFQK 561
            SLPPGFRF+PTD EL+  YL RK  G  F  + IAE+D+YK  PW LP+K+    G+ +WYFF PR++KY NG+R NR    GYWK TG D+ +    + VG+ K LVF+ GKAP+G +T+W+MHEYR+ EP         D +VLC +++K
Sbjct:   13 SLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALF--GEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKK 162          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC67_ORYSJ (NAC domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=NAC67 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.754e-40
Identity = 77/157 (49.04%), Postives = 105/157 (66.88%), Query Frame = -3
Query:  106 SLPPGFRFHPTDVELIKYYLKRKVMGRKFGFEAIAEVDIYKHAPWDLPDKSSLRSGDLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPVQYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYRIDEPG----LSERGVVQ-DAYVLCIVFQK 561
            +LPPGFRFHPTD EL+ +YL  +  GR      IAE+D+Y+H PWDLP ++    G  +WYFF PR++KY NG+R NRA   GYWK TG D+PV +N    G+ K LVF+ GK PRG +T+W+MHEYR+ + G     +  G ++ D +VLC ++ K
Sbjct:   16 NLPPGFRFHPTDEELVAHYLCPRAAGRAAPVPIIAELDLYRHDPWDLPHRALF--GRREWYFFTPRDRKYPNGSRPNRAAASGYWKATGADKPVLHNGRTAGIKKALVFYHGKPPRGVKTEWIMHEYRLAKKGGAAAAAGAGALRLDDWVLCRLYNK 170          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 4.903e-40
Identity = 79/157 (50.32%), Postives = 108/157 (68.79%), Query Frame = -3
Query:  100 LPPGFRFHPTDVELIKYYLKRKVMGRKFGFEAIAEVDIYKHAPWDLPDKSSLRSGDLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPVQYN--NEVVGMIKTLVFHRGKAPRGDRTDWVMHEYRIDEPGLSE--RGVVQDAYVLCIVFQKDG 558
            +PPGFRFHPTD ELI YYL +KV+   F   AI++VD+ K  PW+LP+K+ +  G+ +WYFF  R++KY  G R NRATE GYWK TGKDR ++ +    ++GM KTLVF++G+AP+G+++ WVMHEYR+D            +D +VLC V  K G
Sbjct:   20 MPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKAKM--GEKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEKSCWVMHEYRLDGKFSYHYISSSAKDEWVLCKVCLKSG 174          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 6.404e-40
Identity = 82/158 (51.90%), Postives = 106/158 (67.09%), Query Frame = -3
Query:  106 SLPPGFRFHPTDVELIKYYLKRKVMGRKFGFEAIAEVDIYKHAPWDLPDKSSLRSGDLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPV--QYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYRIDE----PGLSERGVVQDAYVLCIVFQK 561
            +LPPGFRFHPTD EL+ +YL RKV  +      IAEVD+YK  PWDLP+K+    G  +WYFF PR++KY NG+R NRA   GYWK TG D+PV  + +   VG+ K LVF+ GKAPRG +TDW+MHEYR+ +    PG  +     D +VLC ++ K
Sbjct:   20 NLPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALF--GRKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRGVKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRLYNK 175          
BLAST of CX309021 vs. ExPASy Swiss-Prot
Match: NAC76_ORYSJ (NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 1.427e-39
Identity = 79/163 (48.47%), Postives = 107/163 (65.64%), Query Frame = -3
Query:  106 HPIFSMGKTSLPPGFRFHPTDVELIKYYLKRKVMGRKFGFEAIAEVDIYKHAPWDLPDKSSLRSG-DLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPVQYNNEV-VGMIKTLVFHRGKAPRGDRTDWVMHEYRIDEPGLSERGVVQDAYVLCIVFQK 588
            HP  S G  S+PPGFRFHPTD EL+ YYL++KV       + I E+D+ K  PWDL D+  + +G   +WYFF  ++KKY  G R NRAT  G+WK TG+D+ +   N   +GM KTLVF+ G+AP G +TDW+MHEYR+D+  +    V +D +V+C VF K
Sbjct:    2 HP--SGGALSVPPGFRFHPTDEELLYYYLRKKVAYEAIDLDVIREIDLNKLEPWDLKDRCRIGTGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLANACRIGMRKTLVFYVGRAPHGKKTDWIMHEYRLDQDNVD---VQEDGWVVCRVFMK 159          
The following BLAST results are available for this feature:
BLAST of CX309021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC78_ARATH5.027e-6965.34NAC domain-containing protein 78 OS=Arabidopsis th... [more]
NAC74_ORYSJ6.389e-4854.09NAC domain-containing protein 74 OS=Oryza sativa s... [more]
NAC72_ARATH1.167e-4145.51NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NAC55_ARATH9.880e-4148.72NAC domain-containing protein 55 OS=Arabidopsis th... [more]
NAC29_ARATH9.880e-4145.60NAC domain-containing protein 29 OS=Arabidopsis th... [more]
NAC19_ARATH1.290e-4050.00NAC domain-containing protein 19 OS=Arabidopsis th... [more]
NAC67_ORYSJ3.754e-4049.04NAC domain-containing protein 67 OS=Oryza sativa s... [more]
NAC54_ARATH4.903e-4050.32Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thal... [more]
NAC68_ORYSJ6.404e-4051.90NAC domain-containing protein 68 OS=Oryza sativa s... [more]
NAC76_ORYSJ1.427e-3948.47NAC domain-containing protein 76 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionC21007D11Rv AbsLeaSub1 Citrus clementina cDNA clone C21007D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX309021 ID=CX309021; Name=CX309021; organism=Citrus clementina; type=EST; length=599bp
AGCAGAGGAGATAACATCCACACAATCAACATCCTCATCATTTTCCCAGT
CTTCCTCTCTAAATGGTGCTCCATATTGGGCGCCATTCCTAGGGCCTGGA
CCATCCTTCTGAAAAACAATACAGAGCACGTATGCATCCTGAACAACTCC
TCTTTCAGAAAGACCAGGTTCATCAATTCTATACTCATGCATCACCCAGT
CCGTTCGATCACCACGTGGGGCTTTACCCCTGTGAAAAACCAAAGTCTTA
ATCATCCCCACTACTTCATTATTGTATTGAACAGGTCTATCCTTTCCAGT
AGTTTTCCAATAACCAAACTCAGTGGCACGATTCATCCTAGCTCCGTTTG
CATATTTCTTCTCTCGTGGGCAAAAGAAATACCACTTCAGATCCCCACTC
CTCAAACTAGATTTGTCTGGTAAATCCCAAGGAGCGTGCTTGTAAATGTC
AACTTCAGCAATGGCCTCAAATCCAAATTTCCTACCCATTACTTTCCTCT
TCAAATAATACTTGATCAGTTCAACATCGGTTGGATGAAATCGAAACCCC
GGAGGTAGAGACGTTTTTCCCATAGAGAAAATTGGATGGAATATCTCAA
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