DY257714
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257714 vs. ExPASy Swiss-Prot
Match: UPL3_ARATH (E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana GN=UPL3 PE=1 SV=1) HSP 1 Score: 467.618 bits (1202), Expect = 7.416e-131 Identity = 247/349 (70.77%), Postives = 274/349 (78.51%), Query Frame = 2 Query: 2 RVGLAMWRSNSSSENPPMEIDGDEGKSGKTSNISGDLVHAPLGLFPRPWPPSADASEGGQFSKVIEYFRLLGRVMAKALQDGRLLDLPFSTAFYKLVLGHELDLHDIIPFDAEFGKILQELHVIICRKQHLESMTSDNCEEAVDLRFRGAPIEDLCLDFTLPGYPDYILKPGDENVDINNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLIPKLTIVRKHSSTAPNTPSNGNGAFGISGRMTWPSVMTLG---QLPETFLPYSTK 1039 + L MWRS SS + M+I DE + GK S + D+V APLGLFPRPWP +AD SEGGQF KVIEYFRLLGRVMAKALQDGRLLD+P STAFYKL+LG ELDLHDI+ FDAE GK LQEL V++ RK +LE + DN DL RG IEDL L+FTLPGYP+YIL+ GDE VDI NLEEYISLVVDATVK G+ RQ+EAFR+GFNQVFDITSLQIFTP ELD+LLCGRRELWE LAEHIKFDHGY AKSPAI+NLLEIMGE T DQQRAFCQFVTGAPRLPPGGLAVL PKLTIVRKHSST+ + +NG GA + PSVMT +LP PYSTK Sbjct: 1526 KASLGMWRS-SSGDKVSMQIGRDEIEDGKPSAANRDIVLAPLGLFPRPWPSTADISEGGQFHKVIEYFRLLGRVMAKALQDGRLLDVPLSTAFYKLILGQELDLHDIVLFDAELGKTLQELRVVVARKHYLEGVGGDNSSTISDLCLRGCRIEDLSLEFTLPGYPEYILRSGDEIVDITNLEEYISLVVDATVKRGVTRQIEAFRSGFNQVFDITSLQIFTPSELDYLLCGRRELWEVETLAEHIKFDHGYNAKSPAIINLLEIMGELTADQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTS-SAAANGAGA-SETADDDLPSVMTCANYLKLP----PYSTK 1867
BLAST of DY257714 vs. ExPASy Swiss-Prot
Match: UPL4_ARATH (E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana GN=UPL4 PE=2 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 2.425e-73 Identity = 163/324 (50.31%), Postives = 202/324 (62.35%), Query Frame = 2 Query: 83 GKTSNISGDLVHAPLGLFPRPWPPSADASEGGQFSKVIEYFRLLGRVMAKALQDGRLLDLPFSTAFYKLVLGHELDLHDIIPFDAEFGKILQELHVIICRKQHLESMTSDNCEEAVDLRFRGAPIEDLCLDFTLPGYPDYILKPGDEN--VDINNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLIPKLTIVRKHSSTAPNTPSNGNGAFGISGRMTWPSVMTLG---QLPETFLPYSTK 1039 GK SG L + GLFPRPW ++ S+ V++ F LLG V+AKALQDGR+LDLP S AFYKL+LG EL DI D E K L EL ++ RK+ D+ DL F G IEDLCL+F LPGY DY L P N V+++NLEEYI +V+ATV GI +Q+EAFR+GFNQVF I L+IF EL+ +LCG +L+ + +HIKFDHGYT+ SP + LL+I+ EF +QQRAF QFVTG+PRLP GGLA L PKLTIVRKH S + +T PSVMT +LP PYS+K Sbjct: 1183 GKPVEHSGVLASSS-GLFPRPWSGTSTTSD------VLQKFVLLGTVVAKALQDGRVLDLPLSKAFYKLILGQELSSFDIHFVDPELCKTLVELQALVRRKKLFAEAHGDSGAAKCDLSFHGTKIEDLCLEFALPGYTDYDLAPYSANDMVNLDNLEEYIKGIVNATVCNGIQKQVEAFRSGFNQVFSIEHLRIFNEEELETMLCGECDLFSMNEVLDHIKFDHGYTSSSPPVEYLLQILHEFDREQQRAFLQFVTGSPRLPHGGLASLSPKLTIVRKHGSDSSDT--------------DLPSVMTCANYLKLP----PYSSK 1481
BLAST of DY257714 vs. ExPASy Swiss-Prot
Match: TRIPC_HUMAN (Probable E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens GN=TRIP12 PE=1 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 1.171e-51 Identity = 128/319 (40.13%), Postives = 175/319 (54.86%), Query Frame = 2 Query: 2 RVGLAMWRSNSSSENPPMEIDGDEGKSGKTSNISGDLVHAPLGLFPRPWPPSADASEGGQFSKVIEYFRLLGRVMAKALQDGRLLDLPFSTAFYKLVLGHELDL--HDIIPFDAEFGKILQELHVIICRKQHLE---SMTSDNCEEAVD-LRFRGAPIEDLCLDFTLPGYPDYILKPGDEN--VDINNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRR-ELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLIPKLTIVRKHSSTAPN 931 R L +WR + + P G + + N+ G L P G +P +KV FR LG++MAKA+ D RL+DLP FYK +L E L HD+ D + + L I+ +K+ LE S T ++ + A++ L G +EDL LDFTLPG+P+ LK G ++ V I+NLEEY+ LV+ + G+ RQ ++FR GF VF ++ LQ F P ELD LLCG + + W+ L E + DHGYT S A+ L EI+ F +QQR F QFVTG+PRLP GG L P LTIVRK + N Sbjct: 1644 RADLGLWRGEEVTLSNPK---GSQEGTKYIQNLQG-LFALPFGRTAKP----------AHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWMLRQETSLTSHDLFDIDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETLTMNGCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQFDSFRDGFESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHGYTHDSRAVKFLFEILSSFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTEN 1948
BLAST of DY257714 vs. ExPASy Swiss-Prot
Match: YDE1_SCHPO (Probable ubiquitin fusion degradation protein C12B10.01c OS=Schizosaccharomyces pombe GN=SPAC12B10.01c PE=2 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 4.043e-36 Identity = 96/268 (35.82%), Postives = 142/268 (52.99%), Query Frame = 2 Query: 113 VHAPLGLFPRPWPPSADASEGGQFSKVIEYFRLLGRVMAKALQDGRLLDLPFSTAFYKLVLGHELDLHDIIPFDAEFGKILQELHVIICRKQHLESMTSDNCEEAVDLRFRGAPIEDLCLDFTLPGYPDYILKPGDENVDIN--NLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLIPKLTIVRK 910 V+ GLFP P P + E + I F LG+ +A+++ D R++ + F+ F+ + L + + D L+ L +I K + T D++ +EDL LDFTLPG+P L P + + N+ +Y++ V+D TV G+ +Q+EAF+ GF+ VF TSLQ+ T HEL L E W A L + I DHGYT +SP I LL +M + +QR F QF+TG+ +LP GG A L P LT+VR+ Sbjct: 1347 VYQASGLFPSPIPLLGSSPEN---ERKISLFFALGQFVARSIYDSRIISIQFNPLFFARNI--PLTISSVAKVDKGLANSLRYLEKLIPGKNPTNAET--------DIK-----LEDLHLDFTLPGFPSIELIPDGASTPVTTFNVSDYLNYVIDYTVGKGVQQQLEAFQNGFSSVFPYTSLQVLTEHELVTLFGTVDEDWSYATLMKSIVADHGYTMESPTIQRLLTLMSQMNFQEQRDFLQFITGSRKLPIGGFAGLNPPLTVVRR 1596
BLAST of DY257714 vs. ExPASy Swiss-Prot
Match: UFD4_YEAST (Ubiquitin fusion degradation protein 4 OS=Saccharomyces cerevisiae GN=UFD4 PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 5.839e-35 Identity = 108/336 (32.14%), Postives = 162/336 (48.21%), Query Frame = 2 Query: 2 RVGLAMWRSNSSSENPPMEIDGDEGKSGKTSNISGDLVHAPLGLFPRPWPPSADASEGGQFSKVIEYFRLLGRVMAKALQDGRLLDLPFSTAFYKLVLGHELDLHDI--IPFDAEFGKILQELHVIICRKQHLESMTSDNCEEAVDLRFRGAPIEDLCLDFTLPGYPDYILKPGDENVDIN--NLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLIPKLTIVRKHSSTAPNTPSNGNGAFGISGRMTWPSVMT 997 R L MWR NS S M++D + + LFP P P ++ KVIE F LG +A++L D R+LD FS F++L+ H + ++ +P D E ++ EL ++ + + + + V + +E L L FT+PG D L PG N +N N+EEYI V+D + GI +Q++AF GF++VF + I P EL + E W A L ++ +HGYT S I + + I+ F ++R F QF+TG+P+LP GG L PK T+V KH+ G++ PSVMT Sbjct: 1156 RKSLNMWRCNSYSYRSEMDVDTTDD-------------YITTLLFPEPLNPFSNNE------KVIELFGYLGTFVARSLLDNRILDFRFSKVFFELL--HRMSTPNVTTVPSDVETCLLMIEL---------VDPLLAKSLKYIVANKDDNMTLESLSLTFTVPGNDDIELIPGGCNKSLNSSNVEEYIHGVIDQILGKGIEKQLKAFIEGFSKVFSYERMLILFPDELVDIFGRVEEDWSMATLYTNLNAEHGYTMDSSIIHDFISIISAFGKHERRLFLQFLTGSPKLPIGGFKSLNPKFTVVLKHAED------------GLTADEYLPSVMT 1449
BLAST of DY257714 vs. ExPASy Swiss-Prot
Match: HECD1_HUMAN (E3 ubiquitin-protein ligase HECTD1 OS=Homo sapiens GN=HECTD1 PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 5.852e-27 Identity = 84/243 (34.57%), Postives = 127/243 (52.26%), Query Frame = 2 Query: 263 PFSTAFYKLVLGHELDLHDIIPFDAEFGKILQELHV----IICRKQHLESMTSDNCEEAVDLRFRGA----PIEDLCLDFT------LPGYPDYILKPG--DENVDINNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRE-LWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLIPKLTIVRKHSSTAPNTPS 940 P A++ +L E D + P A F K +++L + I+ K E + +E V G+ IEDL L+F + G+ LKP DE + ++N EEY+ L+ D + TGI +QMEAFR GFN+VF + L F+ E+ +LCG + W + + + GYT SP + + ++ + D+++AF QF TG LPPGGLA L P+LT+VRK +T + PS Sbjct: 2336 PKPPAWFNGILTWE-DFELVNPHRARFLKEIKDLAIKRRQILSNKGLSEDEKNTKLQELVLKNPSGSGPPLSIEDLGLNFQFCPSSRIYGFTAVDLKPSGEDEMITMDNAEEYVDLMFDFCMHTGIQKQMEAFRDGFNKVFPMEKLSSFSHEEVQMILCGNQSPSWAAEDIINYTEPKLGYTRDSPGFLRFVRVLCGMSSDERKAFLQFTTGCSTLPPGGLANLHPRLTVVRKVDATDASYPS 2577
BLAST of DY257714 vs. ExPASy Swiss-Prot
Match: UPL1_ARATH (E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana GN=UPL1 PE=1 SV=3) HSP 1 Score: 107.842 bits (268), Expect = 1.492e-22 Identity = 86/279 (30.82%), Postives = 130/279 (46.59%), Query Frame = 2 Query: 194 IEYFRLLGRVMAKALQDGRLLDLPFSTAFYKLVLGHELDLHDIIPFDAEFGKILQELHVIICRKQHLESMTSDNCEEAVDLRFRGAPIEDLCLDFTLPGYPDYILKPGDENVDI--NNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLIPKLTIVRKHSSTAPNTPSNGNGAFGISGRMTWPSVMTLGQLPETFL 1024 + YF+ +GR++AKAL DG+LLD+ F+ +FYK +LG ++ HDI D ++ K L+ L LE+ SD +DL F E+ + + DY LKPG N+ + EY+ LV + I Q+ AF GFN++ + IF EL+ L+ G E+ + L + ++ YTA SP I E++ F+ + F QFVTG ++P G L R A P A ++ P + QL E L Sbjct: 3405 LSYFKFVGRMVAKALFDGQLLDVYFTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWL---------LENDVSD----ILDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVAGHILTNAIRPQINAFLEGFNELIPRELVSIFNDKELELLISGLPEI-DFDDLKANTEYT-SYTAGSPVIHWFWEVVKAFSKEDMARFLQFVTGTSKVPLEGFKALQGISGPQRLQIHKAYGAPERLPSAHTCFNQLDLPEYQSKEQLQERLL 3668
BLAST of DY257714 vs. ExPASy Swiss-Prot
Match: UPL2_ARATH (E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana GN=UPL2 PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 3.323e-22 Identity = 76/232 (32.76%), Postives = 118/232 (50.86%), Query Frame = 2 Query: 194 IEYFRLLGRVMAKALQDGRLLDLPFSTAFYKLVLGHELDLHDIIPFDAEFGKILQELHVIICRKQHLESMTSDNCEEAVDLRFRGAPIEDLCLDFTLPGYPDYILKPGDENVDI--NNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVL 883 + YF+ +GR++AKAL DG+LLD+ F+ +FYK +LG ++ HDI D ++ K L+ L LE+ SD +DL F E+ + + DY LKPG N+ + EY+ LV D + + I Q+ AF G N++ + IF EL+ L+ G E+ + L + ++ YT SP I E++ F+ + F QFVTG ++P G L Sbjct: 3382 LSYFKFVGRMVAKALFDGQLLDVYFTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWL---------LENDVSD----ILDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVADHILTSAIRPQINAFLEGLNELIPRELVSIFNDKELELLISGLPEI-DFDDLKANTEYT-SYTVGSPVIRWFWEVVKAFSKEDMARFLQFVTGTSKVPLEGFKAL 3598
BLAST of DY257714 vs. ExPASy Swiss-Prot
Match: WWP2_MOUSE (NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Mus musculus GN=Wwp2 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.396e-20 Identity = 77/237 (32.49%), Postives = 116/237 (48.95%), Query Frame = 2 Query: 194 IEYFRLLGRVMAKALQDGRLLDLPFSTAFYKLVLGHELDLHDIIPFDAEFGKILQELHVIICRKQHLESMTSDNCEEAVDLRFRGAPIEDLCLDFTLPGYPDYILKPGDENVDIN--NLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRREL----WEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLI 886 + YFR +GR +A AL G+ +D F+ FYK +L L D+ D EF ++ ++ +LE E ++L F I+D+ + L + LK G EN+ + N EEYI L+ D G+ Q +AF GFN+V + L+ F EL+ +LCG +E+ W+ A+ H YT S I +++ E +++ QFVTG RLP GG A LI Sbjct: 602 LTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRMLNKRPTLKDLESIDPEFYN-----SIVWIKENNLE-------ECGLELFF----IQDMEI---LGKVTTHELKEGGENIRVTEENKEEYIMLLTDWRFTRGVEEQTKAFLDGFNEVAPLEWLRYFDEKELELMLCGMQEIDMSDWQKNAIYRH------YTKSSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELI 813
BLAST of DY257714 vs. ExPASy Swiss-Prot
Match: WWP2_HUMAN (NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Homo sapiens GN=WWP2 PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 5.305e-20 Identity = 75/237 (31.65%), Postives = 116/237 (48.95%), Query Frame = 2 Query: 194 IEYFRLLGRVMAKALQDGRLLDLPFSTAFYKLVLGHELDLHDIIPFDAEFGKILQELHVIICRKQHLESMTSDNCEEAVDLRFRGAPIEDLCLDFTLPGYPDYILKPGDENVDIN--NLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRREL----WEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLI 886 + YFR +GR +A AL G+ +D F+ FYK +L L D+ D EF ++ ++ +LE E ++L F I+D+ + L + LK G E++ + N EEYI L+ D G+ Q +AF GFN+V + L+ F EL+ +LCG +E+ W+ + + H YT S I +++ E +++ QFVTG RLP GG A LI Sbjct: 602 LTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRMLNKRPTLKDLESIDPEFYN-----SIVWIKENNLE-------ECGLELYF----IQDMEI---LGKVTTHELKEGGESIRVTEENKEEYIMLLTDWRFTRGVEEQTKAFLDGFNEVAPLEWLRYFDEKELELMLCGMQEIDMSDWQKSTIYRH------YTKNSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELI 813 The following BLAST results are available for this feature:
BLAST of DY257714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257714 ID=DY257714; Name=DY257714; organism=Citrus clementina; type=EST; length=1343bpback to top |