DY257827
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_BORGA (tRNA-specific 2-thiouridylase mnmA OS=Borrelia garinii GN=mnmA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.855e-24 Identity = 46/128 (35.94%), Postives = 80/128 (62.50%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVILE 384 G+WF+T+GQR+G++L GPW+V+EKD++ N++++S N + +R F V + W++G+ P + + K+RHG Y+C L + N+ + L++ D G++ GQFA FY+ T C+G I + Sbjct: 231 GYWFFTVGQRRGIKLSNGPWFVIEKDLEKNIIYISHNENYLKQAKRKFLVHEIHWINGM-PSDFENFKIKIRHGEKKYSCKLRLI-----TNNLIEIFLNKKDHGISPGQFAIFYKNTECLGGAKIFK 352
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_BORAP (tRNA-specific 2-thiouridylase mnmA OS=Borrelia afzelii (strain PKo) GN=mnmA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.855e-24 Identity = 46/128 (35.94%), Postives = 80/128 (62.50%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVILE 384 G+WF+T+GQR+G++L GPW+V+EKD++ N++++S N + +R F V + W++G P + + K+RHG Y+C L + +N+ + L++ D G++ GQFA FY+ T C+G I + Sbjct: 231 GYWFFTVGQRRGIKLSNGPWFVIEKDLEKNIIYISHNENYSKQAKRKFLVHEIHWING-TPSDFENFKIKIRHGEKKYSCKLKLI-----AKNLIEISLNKKDYGISPGQFAIFYKNTECLGGAKIFK 352
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_BORBZ (tRNA-specific 2-thiouridylase mnmA OS=Borrelia burgdorferi (strain ZS7) GN=mnmA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.605e-23 Identity = 46/128 (35.94%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVILE 384 G+WF+T+GQR+G++L GPW+V+EKD++ N++++S N + +R F V + W++ P + K+RHG Y+C L + N+ + L++ DQG++ GQFA FY+ T C+G I + Sbjct: 231 GYWFFTVGQRRGIKLSNGPWFVIEKDLEKNIIYISHNENYLKQAKRKFLVHEIHWIND-TPTNFENFKIKIRHGEKKYSCKLKLI-----TNNLMEISLNKKDQGISPGQFAIFYKNTECLGGAKIFK 352
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_BORBU (tRNA-specific 2-thiouridylase mnmA OS=Borrelia burgdorferi GN=mnmA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.605e-23 Identity = 46/128 (35.94%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVILE 384 G+WF+T+GQR+G++L GPW+V+EKD++ N++++S N + +R F V + W++ P + K+RHG Y+C L + N+ + L++ DQG++ GQFA FY+ T C+G I + Sbjct: 231 GYWFFTVGQRRGIKLSNGPWFVIEKDLEKNIIYISHNENYLKQAKRKFLVHEIHWIND-TPTNFENFKIKIRHGEKKYSCKLKLI-----TNNLMEISLNKKDQGISPGQFAIFYKNTECLGGAKIFK 352
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_BORRA (tRNA-specific 2-thiouridylase mnmA OS=Borrelia recurrentis (strain A1) GN=mnmA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.520e-20 Identity = 48/129 (37.21%), Postives = 76/129 (58.91%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVILES 387 G+WF+TIGQR+G++L GPW+V EKD++NN++++S + + + F V W++ P + + L K+RHG C IE ++D I V L E D G++ GQF FY+ C+G IL++ Sbjct: 231 GYWFFTIGQRKGIKLSHGPWFVTEKDIQNNIIYISNSTNYLKQGKEQFLVHKTNWIN--KPLKNNNLSAKIRHGEKKIKCK--IETLKD---EIIRVNLEEKDYGISPGQFCIFYKEDECLGGAKILKT 352
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_BORT9 (tRNA-specific 2-thiouridylase mnmA OS=Borrelia turicatae (strain 91E135) GN=mnmA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.598e-20 Identity = 47/129 (36.43%), Postives = 73/129 (56.59%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVILES 387 G+WF+TIGQR+G++L GPW+V EKD++NN++++S + + ++ F V W++ P L K+RHG C +E +I V L E D G++ GQF FYQ C+G IL++ Sbjct: 231 GYWFFTIGQRKGIKLSHGPWFVTEKDIQNNIIYISNSINYLKQGKQQFLVHKTNWIN--KPLNNGDLSAKIRHGEKKIKCK-----IEMLKNDIIKVDLEEKDYGISPGQFCIFYQEDECLGGAKILKT 352
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_BORDL (tRNA-specific 2-thiouridylase mnmA OS=Borrelia duttonii (strain Ly) GN=mnmA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.598e-20 Identity = 48/129 (37.21%), Postives = 75/129 (58.14%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVILES 387 G+WF+TIGQR+G++L GPW+V EKD++NN++++S + + + F V W++ P + L K+RHG C IE ++D I V L E D G++ GQF FY+ C+G IL++ Sbjct: 231 GYWFFTIGQRKGIKLSHGPWFVTEKDIQNNIIYISNSTNYLKQGKEQFLVHKTNWIN--KPLKNDNLSAKIRHGEKKIKCK--IETLKD---EIIRVNLEEKDYGISPGQFCIFYKEDECLGGAKILKT 352
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_BORHD (tRNA-specific 2-thiouridylase mnmA OS=Borrelia hermsii (strain DAH) GN=mnmA PE=3 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 7.843e-20 Identity = 47/129 (36.43%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVILES 387 G+WF+TIGQR+G++L GPW+V EKD++NN++++S + + + F V W++ P L K+RHG C +E +I V L E D G++ GQF FYQ C+G IL++ Sbjct: 231 GYWFFTIGQRKGIKLSHGPWFVTEKDIQNNIIYISNSVNYLAQGKHQFLVHKTNWIN--KPVNNIDLSAKIRHGEKKIKCK-----IEMLKNDIIKVDLEEKDYGISPGQFCIFYQEDECLGGAQILQT 352
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA2_BACFR (tRNA-specific 2-thiouridylase mnmA 2 OS=Bacteroides fragilis GN=mnmA2 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.116e-17 Identity = 51/131 (38.93%), Postives = 76/131 (58.02%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEIS---RLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFY--QGTRCIGSGVI 378 G+WF+TIGQR+GL L GGPW+VV+KD+++N+++VS Y + + FR+ +++ P E + + K+RH P F L+ H E+G I+ SE QG+A GQF Y + C GSG I Sbjct: 228 GYWFHTIGQRKGLGLGGGPWFVVKKDIQDNIIYVSHGYDAEQQYGYEFRMKDFNFITDNPWEGSTGEEEVTFKIRHTPEFIKGRLL--HDEEGYRIIS----SEKLQGIAPGQFGVIYDAESRVCFGSGEI 352
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA2_BACFN (tRNA-specific 2-thiouridylase mnmA 2 OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=mnmA2 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.116e-17 Identity = 51/131 (38.93%), Postives = 76/131 (58.02%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEIS---RLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFY--QGTRCIGSGVI 378 G+WF+TIGQR+GL L GGPW+VV+KD+++N+++VS Y + + FR+ +++ P E + + K+RH P F L+ H E+G I+ SE QG+A GQF Y + C GSG I Sbjct: 228 GYWFHTIGQRKGLGLGGGPWFVVKKDIQDNIIYVSHGYDAEQQYGYEFRMKDFNFITDNPWEGSTGEEEVTFKIRHTPEFIKGRLL--HDEEGYRIIS----SEKLQGIAPGQFGVIYDAESRVCFGSGEI 352 The following BLAST results are available for this feature:
BLAST of DY257827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257827 ID=DY257827; Name=DY257827; organism=Citrus clementina; type=EST; length=716bpback to top |