DY257864
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY257864 vs. ExPASy Swiss-Prot
Match: SK2L2_MOUSE (Superkiller viralicidic activity 2-like 2 OS=Mus musculus GN=Skiv2l2 PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 3.827e-51 Identity = 101/195 (51.79%), Postives = 138/195 (70.77%), Query Frame = 1 Query: 262 DELKNRSRVLKKLGHINADGVVQLKGQAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLRQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 846 DELK R RVL++LG + V+++KG+ AC I + DELL+TE+MFNG FNDL Q AL SCF+ + SSE L +LA PLRQ+QE A++IA++ E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+FEGSIIR RRL+E L Q+ AA+A+G LE KFA ++R I+F+ SLYL Sbjct: 847 DELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSSEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1040
BLAST of DY257864 vs. ExPASy Swiss-Prot
Match: SK2L2_HUMAN (Superkiller viralicidic activity 2-like 2 OS=Homo sapiens GN=SKIV2L2 PE=1 SV=3) HSP 1 Score: 202.216 bits (513), Expect = 4.998e-51 Identity = 101/195 (51.79%), Postives = 138/195 (70.77%), Query Frame = 1 Query: 262 DELKNRSRVLKKLGHINADGVVQLKGQAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLRQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 846 DELK R RVL++LG + V+++KG+ AC I + DELL+TE+MFNG FNDL Q AL SCF+ + SSE L +LA PLRQ+QE A++IA++ E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+FEGSIIR RRL+E L Q+ AA+A+G LE KFA ++R I+F+ SLYL Sbjct: 849 DELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1042
BLAST of DY257864 vs. ExPASy Swiss-Prot
Match: YDVG_SCHPO (Uncharacterized helicase C6F12.16c OS=Schizosaccharomyces pombe GN=SPAC6F12.16c PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 3.706e-46 Identity = 95/196 (48.47%), Postives = 137/196 (69.90%), Query Frame = 1 Query: 262 DELKNRSRVLKKLGHINADGVVQLKGQAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSS-EQINLRMELAKPLRQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 846 DEL +R RVL++LG +D V+++KG+ AC I +GD LL+TEL+FNG FNDL Q AAL SC + +KS E ++ ELA PL+ LQE AR+IA++ E K E+N +EYV S +P LM+V+Y W+ GA+FA++ +MTD++EGS+IR RRL+E + Q+ AA+ +G +L++K + R I+FS SLYL Sbjct: 923 DELNSRKRVLRRLGFTTSDDVIEVKGRVACEISSGDGLLLTELIFNGMFNDLTPEQCAALLSCLVFQEKSEVENQRMKEELAGPLKILQEMARRIAKVSKESKQELNEEEYVNS-FKPSLMEVVYAWAHGASFAQICKMTDVYEGSLIRMFRRLEELIRQMVDAAKVIGNTSLQQKMEDTIACIHRDIVFSASLYL 1117
BLAST of DY257864 vs. ExPASy Swiss-Prot
Match: MTR4_CAEEL (mRNA transport homolog 4 OS=Caenorhabditis elegans GN=mtr-4 PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 3.138e-45 Identity = 95/195 (48.72%), Postives = 133/195 (68.21%), Query Frame = 1 Query: 262 DELKNRSRVLKKLGHINADGVVQLKGQAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLRQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 846 +EL NR RVL++LG++ D + LKG AC + DEL++TE++ G FN LD Q AAL SCF+ DK + L EL L +L E AR +A++ NECK+EV D+YV S+ P LMDV+Y W GATF+E+++ TD+FEGSIIR+ RRL+E L ++ AA+A+ LE+KF A ++L+R I+F+ SLYL Sbjct: 834 EELNNRKRVLRRLGYLGNDDALVLKGSVACELSASDELILTEMLLKGIFNTLDVAQTAALLSCFVFQDKCAAP-KLATELQTCLSELHEQARNVAKVSNECKMEVMEDKYV-SSFNPGLMDVVYQWVNGATFSEIVKTTDVFEGSIIRTLRRLEEVLREMINAAKALANKELEQKFEDARKNLKRDIVFAASLYL 1026
BLAST of DY257864 vs. ExPASy Swiss-Prot
Match: MTR4_YEAST (ATP-dependent RNA helicase DOB1 OS=Saccharomyces cerevisiae GN=MTR4 PE=1 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 1.116e-42 Identity = 88/195 (45.13%), Postives = 133/195 (68.21%), Query Frame = 1 Query: 262 DELKNRSRVLKKLGHINADGVVQLKGQAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLRQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 846 D+L+ R RVL++LG + +++LKG+ AC I +GDELL+TEL+FNG FN+L Q AAL SCF ++ E L+ ELA+PL+ ++E A KIA+I + K+EV +YVES R LM+V+Y W +GATF ++ +MTD++EGS+IR +RL+E + +L A +G +L++K A + + R I+ + SLYL Sbjct: 880 DDLRRRKRVLRRLGFCTPNDIIELKGRVACEISSGDELLLTELIFNGNFNELKPEQAAALLSCFAFQERCKEAPRLKPELAEPLKAMREIAAKIAKIMKDSKIEVVEKDYVES-FRHELMEVVYEWCRGATFTQICKMTDVYEGSLIRMFKRLEELVKELVDVANTIGNSSLKEKMEAVLKLIHRDIVSAGSLYL 1073
BLAST of DY257864 vs. ExPASy Swiss-Prot
Match: YE02_SCHPO (Uncharacterized helicase C17H9.02 OS=Schizosaccharomyces pombe GN=SPAC17H9.02 PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 2.944e-35 Identity = 80/195 (41.03%), Postives = 120/195 (61.54%), Query Frame = 1 Query: 265 ELKNRSRVLKKLGHINADGVVQLKGQAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSS-EQINLRMELAKPLRQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 846 ELK R RVL++LG + V+ +KG+ AC I +GDELL+ EL+F G FN + ++AA SCF+ DKS +NL+ K + E+A++IA + E KL+ N +Y+ +P +M+ + W GA+F E+ ++ ++EGSI+R+ RRLDE L QL AA +G L++K + L R I+FS SLYL Sbjct: 837 ELKIRQRVLRRLGFCTLENVIDIKGRVACEITSGDELLLVELIFQGFFNQMPPEEIAAALSCFVYEDKSEVSTLNLKEPFKKMYLTIIEAAKRIATVSLESKLQFNESDYLHQ-FKPDIMEPVSLWINGASFQEICIVSKLYEGSIVRTFRRLDELLKQLEHAAIVLGNNELKEKSVLTEQKLHRDIIFSASLYL 1030
BLAST of DY257864 vs. ExPASy Swiss-Prot
Match: YJV3_SCHPO (Uncharacterized helicase C550.03c OS=Schizosaccharomyces pombe GN=SPCC550.03c PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 3.262e-26 Identity = 68/195 (34.87%), Postives = 110/195 (56.41%), Query Frame = 1 Query: 265 ELKNRSRVLKKLGHINADGVVQLKGQAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLRQLQESARKIAEIQNECK-LEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 846 + + R +VL++LG+I+A+ V LKG+ AC I++ EL++TEL+ + D + AL S F+ +K+ + + L K + A K+ +IQ + L N ES R LM+V Y W++G +F + +TD+ EGSI+R+ RLDE L + R AA+ VG+ ++ K +RR I+F SLY+ Sbjct: 1019 DYEQRIKVLQELGYIDAERTVLLKGRVACEINSTSELVLTELILENSLADFSCEETIALLSAFVFDEKTEVEPTISPHLQKGKEMILSVAEKVNQIQEHYQVLYFNEGNDFESQPRFGLMEVCYEWARGMSFNRITDLTDVLEGSIVRTIIRLDEVLRECRGAARVVGDSSMYTKMEECQNLIRRNIVFCPSLYM 1213
BLAST of DY257864 vs. ExPASy Swiss-Prot
Match: SKIV2_HUMAN (Helicase SKI2W OS=Homo sapiens GN=SKIV2L PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 2.585e-23 Identity = 67/193 (34.72%), Postives = 108/193 (55.96%), Query Frame = 1 Query: 265 ELKNRSRVLKKLGHINADGVVQLKGQAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLRQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 843 E R VL+ LG+++ G V+L G+ AC + + ELL+TELMF+ + L ++AAL S + L L + + +++ A++I E+Q C L V+E+V + L++V+Y W++G F+E+ ++ EG ++R +RL E LR AA+ VGE L K A+ LRR I+F+ SLY Sbjct: 1054 EYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244
BLAST of DY257864 vs. ExPASy Swiss-Prot
Match: SKI2_YEAST (Antiviral helicase SKI2 OS=Saccharomyces cerevisiae GN=SKI2 PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 3.493e-20 Identity = 60/197 (30.46%), Postives = 112/197 (56.85%), Query Frame = 1 Query: 265 ELKNRSRVLKKLGHINADGVVQLKGQAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIN--LRMELAKPLRQLQESARKIAEIQNECKLEVNVDEYVESTVRPF-LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 846 + + R VLK I+ + V LKG+ AC I++G EL++TEL+ + + ++ AL S F+ K+ E+ + LAK ++++E +K+ + N ++ + DE + F +M+V+Y W++G +F E+++M+ EG+++R LDE +++ A+ +G L K + A E ++R I+F+ SLYL Sbjct: 1091 DYEKRLAVLKDTEFIDQNHNVLLKGRVACEINSGYELVLTELILDNFLGSFEPEEIVALLSVFVYEGKTREEEPPIVTPRLAKGKQRIEEIYKKMLCVFNTHQIPLTQDEAEFLDRKRFAMMNVVYEWARGLSFKEIMEMSPEAEGTVVRVITWLDEICREVKTASIIIGNSTLHMKMSRAQELIKRDIVFAASLYL 1287 The following BLAST results are available for this feature:
BLAST of DY257864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257864 ID=DY257864; Name=DY257864; organism=Citrus clementina; type=EST; length=1198bpback to top |