DY257895

Overview
NameDY257895
Unique NameDY257895
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length540
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY257895_ssr430 microsatellite DY257895_ssr430:430..445. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10083 contig Ccv1_Contig10083:6..545. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY257895 vs. ExPASy Swiss-Prot
Match: CP51_SORBI (Obtusifoliol 14-alpha demethylase OS=Sorghum bicolor GN=CYP51 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 2.144e-46
Identity = 85/104 (81.73%), Postives = 89/104 (85.58%), Query Frame = 1
Query:    1 PAFANRLPHIYKNPDSYDPDRFAPGREEDKAAGAFSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEFELISPFPEIDWNAXXXXXXXXXXXRYKRRELSVD 312
            P+FANRLPHIYKNPDSYDPDRF PGREEDKAAGAFSYISFGGGRHGCLGEPFAYLQIKAIW+HLLRNFEFEL+SPFPE DWNA            YKRR+L VD
Sbjct:  388 PSFANRLPHIYKNPDSYDPDRFGPGREEDKAAGAFSYISFGGGRHGCLGEPFAYLQIKAIWTHLLRNFEFELVSPFPENDWNAMVVGIKGEVMVNYKRRKLVVD 491          
BLAST of DY257895 vs. ExPASy Swiss-Prot
Match: CP51_WHEAT (Obtusifoliol 14-alpha demethylase (Fragment) OS=Triticum aestivum GN=CYP51 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.371e-45
Identity = 84/104 (80.77%), Postives = 88/104 (84.62%), Query Frame = 1
Query:    1 PAFANRLPHIYKNPDSYDPDRFAPGREEDKAAGAFSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEFELISPFPEIDWNAXXXXXXXXXXXRYKRRELSVD 312
            PAFANRLPHI+KNPDSYDPDRFA GREEDK AGAFSYISFGGGRHGCLGEPFAYLQIKAIW+HLLRNFEFEL+SPFPE DWNA            YKRR+L VD
Sbjct:  349 PAFANRLPHIFKNPDSYDPDRFAAGREEDKVAGAFSYISFGGGRHGCLGEPFAYLQIKAIWTHLLRNFEFELVSPFPENDWNAMVVGIKGEVMVNYKRRKLIVD 452          
BLAST of DY257895 vs. ExPASy Swiss-Prot
Match: CP51_MYCVP (Lanosterol 14-alpha demethylase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=cyp51 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.499e-15
Identity = 44/102 (43.14%), Postives = 61/102 (59.80%), Query Frame = 1
Query:    1 PAFANRLPHIYKNPDSYDPDRFAPGREEDKAAGAFSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEFELISPFPEI---DWNAXXXXXXXXXXXRYKRR 297
            PA +NR+P  + NPD +DPDR+   R+ED     +++I FG G+H C+G  FA +QIKAI+S LLR +EFE+  P PE    D +            RY+RR
Sbjct:  350 PAISNRIPEDFPNPDDFDPDRYEKPRQED-LINRWTWIPFGAGKHRCVGAAFAQMQIKAIFSVLLREYEFEMAQP-PESYQNDHSKMVVQLARPAKVRYRRR 449          
BLAST of DY257895 vs. ExPASy Swiss-Prot
Match: CP51_DICDI (Probable lanosterol 14-alpha demethylase OS=Dictyostelium discoideum GN=cyp51 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.657e-14
Identity = 41/100 (41.00%), Postives = 56/100 (56.00%), Query Frame = 1
Query:    1 PAFANRLPHIYKNPDSYDPDRFAPGREEDKAAGAFSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEFELISPFPEIDWNAXXXXXXXXXXXRYKRRE 300
            P    RLP +YKNPDS++P RF     EDK    FS+I+FGGG+HGC GE F  LQIK IW+ L   +  E + P P  D+ +           +Y +++
Sbjct:  372 PQVGMRLPTVYKNPDSFEPKRFDV---EDKTP--FSFIAFGGGKHGCPGENFGILQIKTIWTVLSTKYNLE-VGPVPPTDFTSLVAGPKGPCMVKYSKKQ 465          
BLAST of DY257895 vs. ExPASy Swiss-Prot
Match: CP51_MYCTU (Lanosterol 14-alpha demethylase OS=Mycobacterium tuberculosis GN=cyp51 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.551e-12
Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = 1
Query:    1 PAFANRLPHIYKNPDSYDPDRFAPGREEDKAAGAFSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEFELISPFPEI---DWNAXXXXXXXXXXXRYKRR 297
            PA +NR+P  + +P  + P R+   R+ED     +++I FG GRH C+G  FA +QIKAI+S LLR +EFE+  P PE    D +            RY+RR
Sbjct:  349 PAISNRIPEDFPDPHDFVPARYEQPRQED-LLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQP-PESYRNDHSKMVVQLAQPACVRYRRR 448          
BLAST of DY257895 vs. ExPASy Swiss-Prot
Match: CP51_MYCBO (Lanosterol 14-alpha demethylase OS=Mycobacterium bovis GN=cyp51 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.551e-12
Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = 1
Query:    1 PAFANRLPHIYKNPDSYDPDRFAPGREEDKAAGAFSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEFELISPFPEI---DWNAXXXXXXXXXXXRYKRR 297
            PA +NR+P  + +P  + P R+   R+ED     +++I FG GRH C+G  FA +QIKAI+S LLR +EFE+  P PE    D +            RY+RR
Sbjct:  349 PAISNRIPEDFPDPHDFVPARYEQPRQED-LLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQP-PESYRNDHSKMVVQLAQPACVRYRRR 448          
BLAST of DY257895 vs. ExPASy Swiss-Prot
Match: CP51A_RAT (Lanosterol 14-alpha demethylase OS=Rattus norvegicus GN=Cyp51a1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.512e-12
Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 1
Query:    1 PAFANRLPHIYKNPDSYDPDRFAPGREEDKAAGA-FSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEFELISP-FPEIDWNAXXXXXXXXXXXRYKRR 297
            P    RL   +     ++PDR+    +++ A+G  F+Y+ FG GRH C+GE FAY+QIK IWS +LR +EF+LI+  FP +++             RYKRR
Sbjct:  405 PTVNQRLKDSWVERLDFNPDRYL---QDNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLINGYFPSVNYTT-MIHTPENPVIRYKRR 501          
BLAST of DY257895 vs. ExPASy Swiss-Prot
Match: CP51A_BOVIN (Lanosterol 14-alpha demethylase OS=Bos taurus GN=CYP51A1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.512e-12
Identity = 41/101 (40.59%), Postives = 57/101 (56.44%), Query Frame = 1
Query:    1 PAFANRLPHIYKNPDSYDPDRFAPGREEDKAAGA-FSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEFELISP-FPEIDWNAXXXXXXXXXXXRYKRR 297
            P    RL   +     ++PDR+    E+  A+G  F+Y+ FG GRH C+GE FAY+QIK IWS +LR +EF+LI   FP +++             RYKRR
Sbjct:  404 PTVNQRLKDSWVERLDFNPDRYL---EDSPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTT-MIHTPEKPIIRYKRR 500          
BLAST of DY257895 vs. ExPASy Swiss-Prot
Match: CP51A_MOUSE (Lanosterol 14-alpha demethylase OS=Mus musculus GN=Cyp51a1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.893e-12
Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 1
Query:    1 PAFANRLPHIYKNPDSYDPDRFAPGREEDKAAGA-FSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEFELISP-FPEIDWNAXXXXXXXXXXXRYKRR 297
            P    RL   +     ++PDR+    +++ A+G  F+Y+ FG GRH C+GE FAY+QIK IWS +LR +EF+LI+  FP +++             RYKRR
Sbjct:  405 PTVNQRLKDSWAERLDFNPDRYL---QDNPASGEKFAYVPFGAGRHRCVGENFAYVQIKTIWSTMLRLYEFDLINGYFPTVNYTT-MIHTPENPVIRYKRR 501          
BLAST of DY257895 vs. ExPASy Swiss-Prot
Match: CP51A_PONAB (Lanosterol 14-alpha demethylase OS=Pongo abelii GN=CYP51A1 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 7.697e-12
Identity = 40/101 (39.60%), Postives = 58/101 (57.43%), Query Frame = 1
Query:    1 PAFANRLPHIYKNPDSYDPDRFAPGREEDKAAGA-FSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEFELISP-FPEIDWNAXXXXXXXXXXXRYKRR 297
            P    RL   +     ++PDR+    +++ A+G  F+Y+ FG GRH C+GE FAY+QIK IWS +LR +EF+LI   FP +++             RYKRR
Sbjct:  405 PTVNQRLKDSWVERLDFNPDRYL---QDNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTT-MIHTPENPVIRYKRR 501          
The following BLAST results are available for this feature:
BLAST of DY257895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CP51_SORBI2.144e-4681.73Obtusifoliol 14-alpha demethylase OS=Sorghum bicol... [more]
CP51_WHEAT2.371e-4580.77Obtusifoliol 14-alpha demethylase (Fragment) OS=Tr... [more]
CP51_MYCVP1.499e-1543.14Lanosterol 14-alpha demethylase OS=Mycobacterium v... [more]
CP51_DICDI1.657e-1441.00Probable lanosterol 14-alpha demethylase OS=Dictyo... [more]
CP51_MYCTU1.551e-1240.20Lanosterol 14-alpha demethylase OS=Mycobacterium t... [more]
CP51_MYCBO1.551e-1240.20Lanosterol 14-alpha demethylase OS=Mycobacterium b... [more]
CP51A_RAT4.512e-1239.60Lanosterol 14-alpha demethylase OS=Rattus norvegic... [more]
CP51A_BOVIN4.512e-1240.59Lanosterol 14-alpha demethylase OS=Bos taurus GN=C... [more]
CP51A_MOUSE5.893e-1239.60Lanosterol 14-alpha demethylase OS=Mus musculus GN... [more]
CP51A_PONAB7.697e-1239.60Lanosterol 14-alpha demethylase OS=Pongo abelii GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2AC02ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257895 ID=DY257895; Name=DY257895; organism=Citrus clementina; type=EST; length=540bp
CCAGCATTTGCAAACCGGCTTCCTCATATTTACAAGAATCCAGACAGTTA
CGATCCTGATAGGTTTGCTCCTGGAAGAGAAGAAGATAAGGCTGCTGGGG
CATTCTCATATATTTCGTTTGGTGGGGGTAGGCATGGATGTCTTGGTGAG
CCTTTTGCATATCTGCAGATAAAGGCAATATGGAGCCATTTGTTAAGAAA
TTTTGAATTTGAGCTGATATCTCCTTTCCCTGAGATTGATTGGAATGCAA
TGGTTGTTGGTGTCAAAGGAAAGGTGATGGTGCGTTACAAGCGCAGGGAA
CTTTCTGTTGACTAGATGGAACTACTTAGAGCAAGTATGTTGTCTGGGAT
GTTATAGACTAAGTTTTGTTTGAACTGCTGCTGCCATAGTCTTATTATGT
GTTATCGGAGAGGTTCTTGGCTTTTTTCTTCTCTCTCTCTCTCTCTTTTT
TTTTTTAAATTTATTTAACGGCGTTGTAACCTTTGCTTTCCTGATTCCCG
TACTTGTGACAAATTATGTAGATTAGCTTTTGCGTCAAGC
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