DY257905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY257905 vs. ExPASy Swiss-Prot
Match: RU1C_XENLA (U1 small nuclear ribonucleoprotein C OS=Xenopus laevis GN=snrp1c PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.918e-18 Identity = 43/66 (65.15%), Postives = 51/66 (77.27%), Query Frame = 2 Query: 137 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTAAFQQ 334 MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+ TAAFQQ Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------TTAAFQQ 59
BLAST of DY257905 vs. ExPASy Swiss-Prot
Match: RU1C_MOUSE (U1 small nuclear ribonucleoprotein C OS=Mus musculus GN=Snrpc PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.918e-18 Identity = 43/66 (65.15%), Postives = 51/66 (77.27%), Query Frame = 2 Query: 137 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTAAFQQ 334 MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+ TAAFQQ Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------TTAAFQQ 59
BLAST of DY257905 vs. ExPASy Swiss-Prot
Match: RU1C_HUMAN (U1 small nuclear ribonucleoprotein C OS=Homo sapiens GN=SNRPC PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.918e-18 Identity = 43/66 (65.15%), Postives = 51/66 (77.27%), Query Frame = 2 Query: 137 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTAAFQQ 334 MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+ TAAFQQ Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------TTAAFQQ 59
BLAST of DY257905 vs. ExPASy Swiss-Prot
Match: RU1C_DICDI (U1 small nuclear ribonucleoprotein C OS=Dictyostelium discoideum GN=snrpC PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.727e-18 Identity = 43/88 (48.86%), Postives = 57/88 (64.77%), Query Frame = 2 Query: 137 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTAAFQQVGAAYNQHLLAQRPRLPVLPTP 400 MP+YYCDYCD YLTHDSPSVRK H G +HK V+ +YQQFE + TQSLI+ R+KE+ ++ L +P + ++PTP Sbjct: 1 MPKYYCDYCDKYLTHDSPSVRKSHTVGKQHKLAVQLFYQQFEAEFTQSLIEARLKEY------------EESKGRLIHQPPMGIIPTP 76
BLAST of DY257905 vs. ExPASy Swiss-Prot
Match: RU1C_BOVIN (U1 small nuclear ribonucleoprotein C OS=Bos taurus GN=SNRPC PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.140e-17 Identity = 43/66 (65.15%), Postives = 50/66 (75.76%), Query Frame = 2 Query: 137 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTAAFQQ 334 MP+ YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+ TAAFQQ Sbjct: 1 MPKLYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------TTAAFQQ 59
BLAST of DY257905 vs. ExPASy Swiss-Prot
Match: RU1C_SCHPO (U1 small nuclear ribonucleoprotein C OS=Schizosaccharomyces pombe GN=usp103 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.638e-11 Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 2 Query: 137 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQR 295 MPRY CDYC +LTHDS SVRK HNAG H NV+ YY + +++ Q +++R Sbjct: 1 MPRYLCDYCQVWLTHDSQSVRKAHNAGRAHIQNVQDYYTKVAQEEAQKQLEER 53 The following BLAST results are available for this feature:
BLAST of DY257905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257905 ID=DY257905; Name=DY257905; organism=Citrus clementina; type=EST; length=939bpback to top |