DY257965

Overview
NameDY257965
Unique NameDY257965
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length981
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9831 contig Ccv1_Contig9831:4..984. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY257965 vs. ExPASy Swiss-Prot
Match: GH39_ARATH (Putative indole-3-acetic acid-amido synthetase GH3.9 OS=Arabidopsis thaliana GN=GH3.9 PE=2 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 2.196e-97
Identity = 170/251 (67.73%), Postives = 207/251 (82.47%), Query Frame = 1
Query:    1 SWKGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYIAGKLPLVGTMYASSECYFGVNLKPLSNPADFSFTLLPNMCYFEFLPLEGENGTLFSIEFNEEEEVPNDKLVDLGHVRAGHYYELVVTTFAGLNRYRIGDVLQVTGFYNRAPQFLFICRRNVVLSIDYDKTHE*DLHKSVTIAKNLLEPYSALLVQYTTYADTSTVPGHYVLYWEIQIVDSPALPLDHQKVLEECCIAVE*QLDYVYRRCPSHNKSV 753
            SWKGILCQLWP+AK+IEAVVTGSMAQYIP+LE++  GK+PLV  MYASSE YFGVN++PLS P+D  FTLLPNMCYFEF+PL G+NGTL S + +++E+VP DK+VDL +V+ G YYELVVTTFAGL RYRIGDVLQV GFYN APQF FICRRNVVLSID DKT+E DLH+S+T+AK  L   +A L +YT+YADTS+VPGHYVL+WEIQ    P       K++EECC+AVE +LDY+YR+C +  +S+
Sbjct:  281 SWKGILCQLWPKAKFIEAVVTGSMAQYIPALEFFSQGKIPLVCPMYASSETYFGVNVEPLSKPSDVVFTLLPNMCYFEFIPL-GKNGTL-SFDLDDDEQVPCDKVVDLVNVKLGRYYELVVTTFAGLYRYRIGDVLQVAGFYNGAPQFRFICRRNVVLSIDLDKTNEEDLHRSITLAKKKLGS-NAFLAEYTSYADTSSVPGHYVLFWEIQGHLEP-------KLMEECCVAVEEELDYIYRQCRTKERSI 521          

HSP 2 Score: 35.4242 bits (80), Expect = 2.196e-97
Identity = 17/35 (48.57%), Postives = 22/35 (62.86%), Query Frame = 3
Query:  759 LKKRVVKPATFETLKICLVTQGVSLNNKKPQACLK 863
            L+ RVVKP TFE L   +++QG S N  K   C+K
Sbjct:  524 LEIRVVKPGTFEKLMDLIISQGGSFNQYKTPRCVK 558          
BLAST of DY257965 vs. ExPASy Swiss-Prot
Match: GH311_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.11 OS=Oryza sativa subsp. japonica GN=GH3.11 PE=2 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 1.860e-90
Identity = 166/252 (65.87%), Postives = 196/252 (77.78%), Query Frame = 1
Query:    1 SWKGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYIAGKLPLVGTMYASSECYFGVNLKPLSNPADFSFTLLPNMCYFEFLPLEGENGTLFSIEFNEEEEVPNDKLVDLGHVRAGHYYELVVTTFAGLNRYRIGDVLQVTGFYNRAPQFLFICRRNVVLSIDYDKTHE*DLHKSVTIAKNLLEPYSALLVQYTTYADTSTVPGHYVLYWEIQIV-DSPALPLDHQKVLEECCIAVE*QLDYVYRRCPSHNKSV 753
            SWKGIL +LWP  KYIEAV+TG+MAQYIP LE+Y  G +P V TMYASSE YFGVNL PL +PAD S+T+LPNM YFEF+PLE  +G   +   + EE + NDKLV L  V+ G YYELVVTTF+GL RYR+GDVLQVTGFYNRAPQF FICRRNV+LSID DKT+E DLH SVT AK +LE  + LL++YT+Y D STVPGHYVL+WEI+   D    PLD Q +LE CC AVE  LDYVYRRC +H++S+
Sbjct:  283 SWKGILGRLWPNVKYIEAVLTGTMAQYIPMLEFYGGGAIPFVCTMYASSESYFGVNLSPLCSPADVSYTILPNMAYFEFIPLE--DGLRLT---DHEEVIENDKLVSLVDVKVGCYYELVVTTFSGLYRYRVGDVLQVTGFYNRAPQFKFICRRNVILSIDSDKTNEEDLHNSVTTAKKILENQNYLLLEYTSYTDISTVPGHYVLFWEIKSTHDERPAPLDAQ-LLESCCAAVEESLDYVYRRCRAHDRSI 528          

HSP 2 Score: 27.7202 bits (60), Expect = 1.860e-90
Identity = 16/55 (29.09%), Postives = 26/55 (47.27%), Query Frame = 3
Query:  759 LKKRVVKPATFETLKICLVTQGVSLNNKKPQACLKPKKVPLICFFPLKGNFFFPQ 923
            L+ R+V+   F+ L   LV+ G S+N  K   C++      +    +   FF PQ
Sbjct:  531 LEIRLVEAGAFDALMDLLVSHGSSINQYKTPRCIESSLALKLLNSKVIACFFSPQ 585          
BLAST of DY257965 vs. ExPASy Swiss-Prot
Match: GH317_ARATH (Indole-3-acetic acid-amido synthetase GH3.17 OS=Arabidopsis thaliana GN=GH3.17 PE=1 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 1.712e-82
Identity = 148/258 (57.36%), Postives = 194/258 (75.19%), Query Frame = 1
Query:    1 SWKGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYIAGKLPLVGTMYASSECYFGVNLKPLSNPADFSFTLLPNMCYFEFLPLEGENG-----TLFSIEFNEEEEVPNDKLVDLGHVRAGHYYELVVTTFAGLNRYRIGDVLQVTGFYNRAPQFLFICRRNVVLSIDYDKTHE*DLHKSVTIAK--NLLEPYSALLVQYTTYADTSTVPGHYVLYWEIQIVDSPALPLDHQKVLEECCIAVE*QLDYVYRRCPSHNKSV 753
            SW+GIL ++WP+AKY+E +VTGSMAQYIP+LE+Y +G LPLV TMYASSECYFG+NL PL +PAD S+TLLPNM YFEFLP++ ++         S   ++++ +  D +V+L +V  G YYE+V+TTF GL RYR+GD+L+VTGF+N+APQF F+ RRNVVLSID DKT E DL  +VT AK  +L  P S LL +YT+YADTS++PGHYVL+WE++   S   P    K +E+CC  VE  LDYVYRRC + +KS+
Sbjct:  285 SWEGILRRIWPKAKYVEVIVTGSMAQYIPTLEFY-SGGLPLVSTMYASSECYFGINLNPLCDPADVSYTLLPNMAYFEFLPVDDKSHEEIHFATHSNTDDDDDALKEDLIVNLVNVEVGQYYEIVITTFTGLYRYRVGDILKVTGFHNKAPQFRFVQRRNVVLSIDTDKTSEEDLLNAVTQAKLNHLQHPSSLLLTEYTSYADTSSIPGHYVLFWELKPRHSNDPPKLDDKTMEDCCSEVEDCLDYVYRRCRNRDKSI 541          

HSP 2 Score: 30.4166 bits (67), Expect = 1.712e-82
Identity = 20/52 (38.46%), Postives = 26/52 (50.00%), Query Frame = 3
Query:  759 LKKRVVKPATFETLKICLVTQGVSLNNKKPQACLKPKKVPLICFFPLKGNFF 914
            L+ RVV   TF++L    V+QG SLN  K   C+K      I    + G FF
Sbjct:  544 LEIRVVSLGTFDSLMDFCVSQGSSLNQYKTPRCVKSGGALEILDSRVIGRFF 595          
BLAST of DY257965 vs. ExPASy Swiss-Prot
Match: GH35_ARATH (Indole-3-acetic acid-amido synthetase GH3.5 OS=Arabidopsis thaliana GN=GH3.5 PE=1 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 6.461e-76
Identity = 139/252 (55.16%), Postives = 183/252 (72.62%), Query Frame = 1
Query:    1 SWKGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYIAGKLPLVGTMYASSECYFGVNLKPLSNPADFSFTLLPNMCYFEFLPLEGENGTLFSIEFNEE-EEVPNDKLVDLGHVRAGHYYELVVTTFAGLNRYRIGDVLQVTGFYNRAPQFLFICRRNVVLSIDYDKTHE*DLHKSVTIAKNLLEPYSALLVQYTTYADTSTVPGHYVLYWEIQIVDSPALPLDHQKVLEECCIAVE*QLDYVYRRCPSHNKSV 753
            SW+GI+ +LWP  KY++ +VTG+M+QYIP+L+YY  G LPLV TMYASSECYFGVNL+PL  P++ S+TL+P+M YFEFLP+   NG   SI   +   E    +LVDL  V+ G  YELVVTT+AGL RYR+GD+L+VTGF N+APQF FICR+NVVLSID DKT E +L  +V  A   L P+ A L +YT+YADTS++PGHYVL+WE+ +  +  +P     V E+CC+AVE   + VYR+    +KS+
Sbjct:  294 SWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNG-LPLVCTMYASSECYFGVNLRPLCKPSEVSYTLIPSMAYFEFLPVHRNNGVTNSINLPKALTEKEQQELVDLVDVKLGQEYELVVTTYAGLCRYRVGDLLRVTGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVTHLVPFDASLSEYTSYADTSSIPGHYVLFWELCLDGNTPIP---PSVFEDCCLAVEESFNTVYRQGRVSDKSI 541          

HSP 2 Score: 28.8758 bits (63), Expect = 6.461e-76
Identity = 12/35 (34.29%), Postives = 21/35 (60.00%), Query Frame = 3
Query:  759 LKKRVVKPATFETLKICLVTQGVSLNNKKPQACLK 863
            L+ ++V+P TF+ L    ++ G S+N  K   C+K
Sbjct:  544 LEIKIVEPGTFDKLMDYAISLGASINQYKTPRCVK 578          
BLAST of DY257965 vs. ExPASy Swiss-Prot
Match: GH31_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.1 OS=Oryza sativa subsp. japonica GN=GH3.1 PE=2 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 4.147e-75
Identity = 134/251 (53.39%), Postives = 181/251 (72.11%), Query Frame = 1
Query:    1 SWKGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYIAGKLPLVGTMYASSECYFGVNLKPLSNPADFSFTLLPNMCYFEFLPLEGENGTLFSIEFNEEEEVPNDKLVDLGHVRAGHYYELVVTTFAGLNRYRIGDVLQVTGFYNRAPQFLFICRRNVVLSIDYDKTHE*DLHKSVTIAKNLLEPYSALLVQYTTYADTSTVPGHYVLYWEIQIVDSPALPLDHQKVLEECCIAVE*QLDYVYRRCPSHNKSV 753
            SW+GI+ +LWPR KYI+ +VTG+M+QYIP+LE+Y  G LPL  TMYASSECYFG+NL P+  P+D ++TL+P MCY+EFLP+   N T          E  +  LVDL  V+ GH YELVVTT++GL RYR+GDVL+V GF N+AP F F+ R+NV LS+D DKT E +LH +V+ A   L P+ A LV+YT+YAD +T+PGHYVL+WE++   S A+P     V EECC++VE  L+ VYR+  + ++S+
Sbjct:  294 SWEGIIRRLWPRTKYIDVIVTGTMSQYIPTLEFY-GGGLPLTCTMYASSECYFGLNLNPMCKPSDVAYTLIPTMCYYEFLPVNCNNATA---------EASHRDLVDLVDVKLGHEYELVVTTYSGLYRYRVGDVLRVAGFKNKAPMFSFVRRQNVALSVDSDKTDETELHAAVSGAVQHLAPFGASLVEYTSYADAATIPGHYVLFWELR-AGSTAVP---ASVFEECCLSVEEALNSVYRQGRACDRSI 530          

HSP 2 Score: 34.2686 bits (77), Expect = 4.147e-75
Identity = 17/55 (30.91%), Postives = 30/55 (54.55%), Query Frame = 3
Query:  759 LKKRVVKPATFETLKICLVTQGVSLNNKKPQACLKPKKVPLICFFPLKGNFFFPQ 923
            L+ RVV   TF+ L    +++G S+N  K   C++P  V  +    ++G +F P+
Sbjct:  533 LEIRVVAEGTFDKLMDYAISRGASINQYKAPRCVRPGPVVELLDARVQGKYFSPK 587          
BLAST of DY257965 vs. ExPASy Swiss-Prot
Match: GH36_ARATH (Indole-3-acetic acid-amido synthetase GH3.6 OS=Arabidopsis thaliana GN=GH3.6 PE=1 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 2.662e-74
Identity = 138/252 (54.76%), Postives = 180/252 (71.43%), Query Frame = 1
Query:    1 SWKGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYIAGKLPLVGTMYASSECYFGVNLKPLSNPADFSFTLLPNMCYFEFLPLEGENGTLFSIEFNEE-EEVPNDKLVDLGHVRAGHYYELVVTTFAGLNRYRIGDVLQVTGFYNRAPQFLFICRRNVVLSIDYDKTHE*DLHKSVTIAKNLLEPYSALLVQYTTYADTSTVPGHYVLYWEIQIVDSPALPLDHQKVLEECCIAVE*QLDYVYRRCPSHNKSV 753
            SW+GI+ +LWP  KY++ +VTG+M+QYIP+L+YY  G LPLV TMYASSECYFGVNL+PL  P++ S+TL+PNM YFEFLP+   +G   SI   +   E    +LVDL  V+ G  YELVVTT+AGL RYR+GDVL V GF N APQF FICR+NVVLSID DKT E +L  +V  A   L P+ A L +YT+YADTS++PGHYVL+WE+ +  +  +P     V E+CC+ +E  L+ VYR+    +KS+
Sbjct:  294 SWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNG-LPLVCTMYASSECYFGVNLRPLCKPSEVSYTLIPNMAYFEFLPVHRNSGVTSSISLPKALTEKEQQELVDLVDVKLGQEYELVVTTYAGLYRYRVGDVLSVAGFKNNAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVTHLVPFDASLSEYTSYADTSSIPGHYVLFWELCLNGNTPIP---PSVFEDCCLTIEESLNSVYRQGRVSDKSI 541          

HSP 2 Score: 25.0238 bits (53), Expect = 2.662e-74
Identity = 11/35 (31.43%), Postives = 20/35 (57.14%), Query Frame = 3
Query:  759 LKKRVVKPATFETLKICLVTQGVSLNNKKPQACLK 863
            L+ ++V+  TF+ L    ++ G S+N  K   C+K
Sbjct:  544 LEIKMVESGTFDKLMDYAISLGASINQYKTPRCVK 578          
BLAST of DY257965 vs. ExPASy Swiss-Prot
Match: GH34_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.4 OS=Oryza sativa subsp. japonica GN=GH3.4 PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 1.096e-72
Identity = 137/255 (53.73%), Postives = 184/255 (72.16%), Query Frame = 1
Query:    1 SWKGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYIAGKLPLVGTMYASSECYFGVNLKPLSNPADFSFTLLPNMCYFEFLPLEGENGTLFSIEFNEEEEVPNDK-LVDLGHVRAGHYYELVVTTFAGLNRYRIGDVLQVTGFYNRAPQFLFICRRNVVLSIDYDKTHE*DLHKSVTIAKNLLEPYSALLVQYTTYADT-STVPGHYVLYWEIQIVDSPA--LPLDHQKVLEECCIAVE*QLDYVYRRCPSHNKSV 753
            SW+GI+ ++WP  KYI+ +VTG+MAQYIP+LE+Y  G LPL  TMYASSECYFG+NL P+  P++ ++TL+P MCYFEFLP+      + + E       P+ + LVDL  V+ GH YELVVTT++GL RYR+GDVL+V GF N AP F F+ R+NV LSID DKT E +LH +VT A   L P+ A LV+YT+YADT +T+PGHYVL+WE++   SPA   P+    V E+CC+AVE  L+ VYR+C + ++S+
Sbjct:  299 SWQGIIRRVWPSTKYIDVIVTGAMAQYIPTLEFY-GGGLPLACTMYASSECYFGLNLNPMCKPSEVAYTLIPTMCYFEFLPVNSGANDVAAPE-------PDHRGLVDLVDVKLGHEYELVVTTYSGLYRYRVGDVLRVAGFKNAAPMFAFVRRKNVALSIDSDKTDEAELHAAVTEAVQHLAPFGASLVEYTSYADTATTIPGHYVLFWELR---SPAGGTPVP-ASVFEDCCLAVEEGLNSVYRQCRAADRSI 541          

HSP 2 Score: 32.3426 bits (72), Expect = 1.096e-72
Identity = 17/61 (27.87%), Postives = 32/61 (52.46%), Query Frame = 3
Query:  759 LKKRVVKPATFETLKICLVTQGVSLNNKKPQACLKPKKVPLICFFPLKGNFFFPQGSQKCS 941
            L+ RVV   TF+ L    +++G S+N  K   C++P  V  +    ++  +F P+  + C+
Sbjct:  544 LEIRVVADGTFDKLMDYALSRGASINQYKAPRCVRPGPVVELLDGRVQATYFSPKCPKWCA 604          
BLAST of DY257965 vs. ExPASy Swiss-Prot
Match: GH33_ARATH (Indole-3-acetic acid-amido synthetase GH3.3 OS=Arabidopsis thaliana GN=GH3.3 PE=1 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 4.515e-71
Identity = 129/253 (50.99%), Postives = 175/253 (69.17%), Query Frame = 1
Query:    1 SWKGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYIAGKLPLVGTMYASSECYFGVNLKPLSNPADFSFTLLPNMCYFEFLPLEGENGTLFSIEFNEEEEVPNDK--LVDLGHVRAGHYYELVVTTFAGLNRYRIGDVLQVTGFYNRAPQFLFICRRNVVLSIDYDKTHE*DLHKSVTIAKNLLEPYSALLVQYTTYADTSTVPGHYVLYWEIQIVDSPALPLDHQKVLEECCIAVE*QLDYVYRRCPSHNKSV 753
            SW+GI+ ++WP  KY++ +VTG+MAQYIP LEYY +G LP+  TMYASSE YFG+NLKP+  P++ S+T++PNM YFEFLP                 EVP +K  LV+L  V  G  YELV+TT+AGLNRYR+GD+LQVTGFYN APQF F+ R+NV+LSI+ DKT E +L  +V  A  LL      +++YT+YA+T T+PGHYV+YWE+ + D    P D  +V+  CC+ +E  L+ VYR+    +KS+
Sbjct:  294 SWEGIITKIWPNTKYLDVIVTGAMAQYIPMLEYY-SGGLPMACTMYASSESYFGINLKPMCKPSEVSYTIMPNMAYFEFLP---------------HHEVPTEKSELVELADVEVGKEYELVITTYAGLNRYRVGDILQVTGFYNSAPQFKFVRRKNVLLSIESDKTDEAELQSAVENASLLLGEQGTRVIEYTSYAETKTIPGHYVIYWELLVKDQTNPPND--EVMARCCLEMEESLNSVYRQSRVADKSI 528          

HSP 2 Score: 28.4906 bits (62), Expect = 4.515e-71
Identity = 14/34 (41.18%), Postives = 20/34 (58.82%), Query Frame = 3
Query:  759 LKKRVVKPATFETLKICLVTQGVSLNNKKPQACL 860
            L+ RVVK  TFE L    +++G S+N  K   C+
Sbjct:  531 LEIRVVKNGTFEELMDYAISRGASINQYKVPRCV 564          
BLAST of DY257965 vs. ExPASy Swiss-Prot
Match: GH32_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.2 OS=Oryza sativa subsp. japonica GN=GH3.2 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 7.006e-69
Identity = 122/246 (49.59%), Postives = 174/246 (70.73%), Query Frame = 1
Query:    4 WKGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYIAGKLPLVGTMYASSECYFGVNLKPLSNPADFSFTLLPNMCYFEFLPLEGENGTLFSIEFNEEEEVPNDKLVDLGHVRAGHYYELVVTTFAGLNRYRIGDVLQVTGFYNRAPQFLFICRRNVVLSIDYDKTHE*DLHKSVTIAKNLLEPYSALLVQYTTYADTSTVPGHYVLYWEIQIVDSPALPLDHQK----VLEECCIAVE*QLDYVYRR 729
            W+GI+ ++WP  KY++ +VTG+MAQYIP+L++Y +G LP+  TMYASSECYFG+NL+P+ +P++ S+T++PNM YFE +P + +   L         + P  +LVDL     G  YELV+TT+AGL RYR+GD+LQVTGF+N APQF F+ R+NV+LSID DKT E +L  +V  A  LL PY A +V+YT+ AD +T+PGHYV+YWE+ + +  A P   ++    V E CC+ +E  L+ VYR+
Sbjct:  304 WEGIITRMWPNTKYLDVIVTGAMAQYIPTLKFY-SGGLPMACTMYASSECYFGLNLRPMCDPSEVSYTIMPNMGYFELMPHDPDAPPL-------PRDAPPPRLVDLADAEVGREYELVITTYAGLCRYRVGDILQVTGFHNAAPQFRFVRRKNVLLSIDSDKTDEAELQAAVERASALLSPYGASIVEYTSQADATTIPGHYVVYWELMVREGGAWPPPAEEEGRGVFERCCLEMEEALNAVYRQ 541          

HSP 2 Score: 26.9498 bits (58), Expect = 7.006e-69
Identity = 12/34 (35.29%), Postives = 20/34 (58.82%), Query Frame = 3
Query:  759 LKKRVVKPATFETLKICLVTQGVSLNNKKPQACL 860
            L+ RVV+  TFE +    +++G S+N  K   C+
Sbjct:  551 LEIRVVRAGTFEEVMDYAISRGASINQYKAPRCV 584          
BLAST of DY257965 vs. ExPASy Swiss-Prot
Match: GH38_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.8 OS=Oryza sativa subsp. japonica GN=GH3.8 PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 7.642e-68
Identity = 123/242 (50.83%), Postives = 171/242 (70.66%), Query Frame = 1
Query:    4 WKGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYIAGKLPLVGTMYASSECYFGVNLKPLSNPADFSFTLLPNMCYFEFLPLEGENGTLFSIEFNEEEEVPNDKLVDLGHVRAGHYYELVVTTFAGLNRYRIGDVLQVTGFYNRAPQFLFICRRNVVLSIDYDKTHE*DLHKSVTIAKNLLEPYSALLVQYTTYADTSTVPGHYVLYWEIQIVDSPALPLDHQKVLEECCIAVE*QLDYVYRR 729
            W GI+ ++WP  KY++ +VTG+MAQYIP+LE+Y +G LP+  TMYASSECYFG+NL+P+ +P++ S+T++PNM YFEFLP++ E G                +LVDL  V  G  YELV+TT+AGLNRYR+GDVL+VTGF+N APQF F+ R+NV+LSI+ DKT E +L ++V  A  LL P+ A +V+YT+ A T  +PGHYV+YWE+    + A  +D    L  CC+ +E  L+ VYR+
Sbjct:  300 WAGIITRVWPNTKYLDVIVTGAMAQYIPTLEFY-SGGLPMACTMYASSECYFGLNLRPMCDPSEVSYTIMPNMGYFEFLPVD-ETGAASG---------DATQLVDLARVEVGREYELVITTYAGLNRYRVGDVLRVTGFHNAAPQFRFVRRKNVLLSIESDKTDEAELQRAVERASALLRPHGASVVEYTSQACTKRIPGHYVIYWELLTKGAGATVVD-ADTLGRCCLEMEEALNTVYRQ 529          

HSP 2 Score: 30.8018 bits (68), Expect = 7.642e-68
Identity = 14/34 (41.18%), Postives = 21/34 (61.76%), Query Frame = 3
Query:  759 LKKRVVKPATFETLKICLVTQGVSLNNKKPQACL 860
            L+ RVV+P TFE L    +++G S+N  K   C+
Sbjct:  540 LEIRVVRPGTFEELMDYAISRGASINQYKVPRCV 573          
The following BLAST results are available for this feature:
BLAST of DY257965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
GH39_ARATH2.196e-9767.73Putative indole-3-acetic acid-amido synthetase GH3... [more]
GH311_ORYSJ1.860e-9065.87Probable indole-3-acetic acid-amido synthetase GH3... [more]
GH317_ARATH1.712e-8257.36Indole-3-acetic acid-amido synthetase GH3.17 OS=Ar... [more]
GH35_ARATH6.461e-7655.16Indole-3-acetic acid-amido synthetase GH3.5 OS=Ara... [more]
GH31_ORYSJ4.147e-7553.39Probable indole-3-acetic acid-amido synthetase GH3... [more]
GH36_ARATH2.662e-7454.76Indole-3-acetic acid-amido synthetase GH3.6 OS=Ara... [more]
GH34_ORYSJ1.096e-7253.73Probable indole-3-acetic acid-amido synthetase GH3... [more]
GH33_ARATH4.515e-7150.99Indole-3-acetic acid-amido synthetase GH3.3 OS=Ara... [more]
GH32_ORYSJ7.006e-6949.59Probable indole-3-acetic acid-amido synthetase GH3... [more]
GH38_ORYSJ7.642e-6850.83Probable indole-3-acetic acid-amido synthetase GH3... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAB2BF02ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257965 ID=DY257965; Name=DY257965; organism=Citrus clementina; type=EST; length=981bp
TCATGGAAAGGAATCTTGTGTCAACTTTGGCCTAGGGCTAAGTACATTGA
GGCTGTAGTCACTGGCTCTATGGCACAATATATACCATCCCTGGAGTATT
ATATTGCAGGGAAGTTGCCCTTGGTGGGCACCATGTATGCTTCATCTGAG
TGTTACTTCGGTGTAAATTTGAAACCCTTGAGTAATCCTGCTGACTTCTC
GTTTACCCTCTTGCCTAACATGTGTTATTTTGAATTTTTGCCATTGGAAG
GTGAGAATGGCACGCTGTTTTCAATAGAATTTAATGAAGAAGAGGAGGTG
CCAAACGATAAGCTTGTTGATTTGGGGCATGTTAGAGCCGGCCATTACTA
TGAATTGGTTGTCACCACTTTTGCCGGGCTGAATCGATATCGAATTGGCG
ATGTACTCCAAGTGACTGGATTCTACAATCGGGCGCCACAATTTCTATTC
ATATGCAGGAGAAATGTTGTTTTGAGCATAGACTATGACAAAACCCACGA
ATAAGATTTGCACAAAAGCGTGACTATTGCTAAAAACTTATTAGAACCTT
ACAGTGCGCTACTTGTACAATACACAACCTATGCTGATACATCCACTGTG
CCCGGCCACTATGTATTATACTGGGAGATTCAAATAGTGGACTCGCCAGC
ACTCCCACTTGATCATCAGAAGGTACTTGAAGAATGTTGCATTGCTGTCG
AATAACAACTTGATTATGTGTACAGGCGCTGCCCTTCTCATAATAAATCA
GTTGAACGCTCAAGAAACGAGTTGTCAAACCTGCCACCTTTGAAACCCTG
AAGATTTGCCTTGTTACCCAAGGCGTATCCTTAAACAATAAAAAACCCCA
AGCTTGCCTCAAACCAAAAAAGGTTCCCCTTATTTGCTTTTTTCCCTTGA
AAGGGAATTTTTTTTTTCCCCAAGGATCCCAAAAGTGTTCCCTTAATTTT
ATTTTAAAAAGGGAATTCGATTTTTCTTTTC
back to top