DY257974

Overview
NameDY257974
Unique NameDY257974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length585
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9836 contig Ccv1_Contig9836:7..591. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY257974 vs. ExPASy Swiss-Prot
Match: GBA2_HUMAN (Non-lysosomal glucosylceramidase OS=Homo sapiens GN=GBA2 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.015e-18
Identity = 48/87 (55.17%), Postives = 57/87 (65.52%), Query Frame = 1
Query:    1 PNGKVDETCMQSREIWTGVTYGVAATMILAGMEKEAFTTAEGIFTAGWSEEGYGYWFQTPEAWTMDGHFRSLIYMRPLSIWGMQWAL 261
            P+G  D++ +QS E+W GV YG+AATMI  G+  E F TAEG +   W  E  G  FQTPEA+     FRSL YMRPLSIW MQ AL
Sbjct:  806 PHGVPDKSSVQSDEVWVGVVYGLAATMIQEGLTWEGFQTAEGCYRTVW--ERLGLAFQTPEAYCQQRVFRSLAYMRPLSIWAMQLAL 890          
BLAST of DY257974 vs. ExPASy Swiss-Prot
Match: GBA2_RAT (Non-lysosomal glucosylceramidase OS=Rattus norvegicus GN=Gba2 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.325e-18
Identity = 48/87 (55.17%), Postives = 56/87 (64.37%), Query Frame = 1
Query:    1 PNGKVDETCMQSREIWTGVTYGVAATMILAGMEKEAFTTAEGIFTAGWSEEGYGYWFQTPEAWTMDGHFRSLIYMRPLSIWGMQWAL 261
            P+G  D + +QS E+W GV YG+AATMI  G+  E F TAEG +   W  E  G  FQTPEA+     FRSL YMRPLSIW MQ AL
Sbjct:  797 PHGVPDRSSVQSDEVWVGVVYGLAATMIQEGLTWEGFRTAEGCYRTVW--ERLGLAFQTPEAYCQQRVFRSLAYMRPLSIWAMQLAL 881          
BLAST of DY257974 vs. ExPASy Swiss-Prot
Match: GBA2_MOUSE (Non-lysosomal glucosylceramidase OS=Mus musculus GN=Gba2 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.325e-18
Identity = 48/87 (55.17%), Postives = 56/87 (64.37%), Query Frame = 1
Query:    1 PNGKVDETCMQSREIWTGVTYGVAATMILAGMEKEAFTTAEGIFTAGWSEEGYGYWFQTPEAWTMDGHFRSLIYMRPLSIWGMQWAL 261
            P+G  D + +QS E+W GV YG+AATMI  G+  E F TAEG +   W  E  G  FQTPEA+     FRSL YMRPLSIW MQ AL
Sbjct:  797 PHGVPDRSSVQSDEVWVGVVYGLAATMIQEGLTWEGFRTAEGCYRTVW--ERLGLAFQTPEAYCQQQVFRSLAYMRPLSIWAMQLAL 881          
BLAST of DY257974 vs. ExPASy Swiss-Prot
Match: C3390_DROME (Non-lysosomal glucosylceramidase OS=Drosophila melanogaster GN=CG33090 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.980e-14
Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 1
Query:    7 GKVDETCMQSREIWTGVTYGVAATMILAGMEKEAFTTAEGIFTAGWSEEGYGYWFQTPEAWTMDGHFRSLIYMRPLSIWGMQWAL 261
            G VD + +Q+ E+W GV Y +AATMI  GM +EAF TA G++      +  G  F+TPEA   +  +RS+ YMRPLSIW MQ AL
Sbjct:  858 GHVDNSNIQAEEVWPGVVYALAATMIQEGMFEEAFQTAGGMYKT--LSQRIGMNFETPEALYGEKRYRSIGYMRPLSIWSMQVAL 940          
The following BLAST results are available for this feature:
BLAST of DY257974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
GBA2_HUMAN1.015e-1855.17Non-lysosomal glucosylceramidase OS=Homo sapiens G... [more]
GBA2_RAT1.325e-1855.17Non-lysosomal glucosylceramidase OS=Rattus norvegi... [more]
GBA2_MOUSE1.325e-1855.17Non-lysosomal glucosylceramidase OS=Mus musculus G... [more]
C3390_DROME1.980e-1449.41Non-lysosomal glucosylceramidase OS=Drosophila mel... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAB2BG03ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257974 ID=DY257974; Name=DY257974; organism=Citrus clementina; type=EST; length=585bp
CCAAATGGGAAAGTGGATGAGACTTGCATGCAGTCACGTGAAATATGGAC
AGGTGTAACGTATGGTGTGGCAGCTACCATGATCCTTGCTGGAATGGAGA
AAGAGGCATTCACTACTGCCGAAGGCATCTTCACTGCAGGCTGGTCAGAA
GAGGGCTATGGATACTGGTTTCAGACCCCTGAGGCATGGACAATGGACGG
CCACTTCCGGTCCCTTATATATATGAGGCCTCTCTCAATTTGGGGCATGC
AGTGGGCGCTATCTATGCCTAAAACAGTTCTCCAGGCTCCTGAGATCAAT
ATAATGGATAGAATAAGCATATCCCCTTCTGCTGCAGCAATATCGCACGA
ATTTGGAGTTAGAAAGATAGCAAACAAAGCAAAGTGTTTTGGAGCTGCTG
TGTTTCATTGTTCATGCTAATTATCAAATGTAAGTGCCCCCCACCCCATC
TTTGTAAAGATGTTAATTTGTTTGCTTCGTTGAACCCTCTTCCAGCTAAA
AAGATAAAATGCCGGAAGAGGCTTTGAGGAAGTGTTTCTTTCATAGACAA
GCAATAAAAACCAAGTTAATTCTGTAGCTTAAACT
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