DY257975
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY257975 vs. ExPASy Swiss-Prot
Match: BRXL1_ORYSJ (Protein Brevis radix-like 1 OS=Oryza sativa subsp. japonica GN=BRXL1 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.614e-16 Identity = 40/83 (48.19%), Postives = 56/83 (67.47%), Query Frame = 1 Query: 253 SQTEASHCEATTKNKNRTMKAEPA--QGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFTEKQAEQWWAANRARVYQQY 495 S +S E +++ ++ A Q EWVE+DE GVYIT+ ALPGG+++L+RVRFSR+KF+E A WW NRAR++ QY Sbjct: 314 SMRSSSSPEEVDRSRELSVSVSNASDQEREWVEEDEPGVYITIRALPGGIRELRRVRFSREKFSEMHARLWWEENRARIHDQY 396 HSP 2 Score: 73.559 bits (179), Expect = 1.755e-12 Identity = 57/181 (31.49%), Postives = 85/181 (46.96%), Query Frame = 1 Query: 13 AAKDVIKSLTAQLKDMAEMLPVGAVRNSN--SFHSSPTPAWDVSSATIEQPSSPLTFQGAIPXXXXXXXXXXXXXFGDNRSPSQT---------EASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFTEKQAEQWWAANRARVYQQYNVSMVDKSS 522 + + IK+LTAQ+KDMA + GA R+ + SS +PA + A P G+ G + +PS + E E + +E + EWV Q E GV IT ++LP G DLKR+RFSR+ F + QA++WWA N +V + YNV ++ + Sbjct: 41 STRQAIKALTAQIKDMA-LKASGAYRHCKPCAGSSSSSPA---AGARRHHPYHAYADSGS----DRFHYAYRRAGSGGDATPSVSARTDFLAGDEEEEEEEEEEEGTTADGSEDDEAKEWVAQVEPGVLITFLSLPEGGNDLKRIRFSREIFNKWQAQRWWAENYEKVMELYNVQRFNQQT 213
BLAST of DY257975 vs. ExPASy Swiss-Prot
Match: BRXL4_ARATH (Protein Brevis radix-like 4 OS=Arabidopsis thaliana GN=BRXL4 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.935e-15 Identity = 41/92 (44.57%), Postives = 59/92 (64.13%), Query Frame = 1 Query: 247 SPSQTEASHCEATTKN-------KNRTMKAEPAQG--DEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFTEKQAEQWWAANRARVYQQY 495 S ++TE S +A+ ++ ++ M A +EWVEQDE GVYIT+ LPGG ++L+RVRFSR++F E A WW NRAR+++QY Sbjct: 292 SVAKTETSSIDASIRSSSSRDADRSEEMSVSNASDVDNEWVEQDEPGVYITIKVLPGGKRELRRVRFSRERFGEMHARLWWEENRARIHEQY 383 HSP 2 Score: 74.7146 bits (182), Expect = 7.880e-13 Identity = 38/88 (43.18%), Postives = 53/88 (60.23%), Query Frame = 1 Query: 277 EATTKNKNRTMKAEPA------QGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFTEKQAEQWWAANRARVYQQYNVSMVDKSS 522 EAT K+ + + +P + EWV Q E GV IT V+LPGG DLKR+RFSR F + QA++WWA N +V + YNV + + + Sbjct: 126 EATPKSASGRNRVDPIVFVEEKEPKEWVAQVEPGVLITFVSLPGGGNDLKRIRFSRDMFNKLQAQRWWADNYDKVMELYNVQKLSRQA 213
BLAST of DY257975 vs. ExPASy Swiss-Prot
Match: BRXL2_ARATH (Protein Brevis radix-like 2 OS=Arabidopsis thaliana GN=BRXL2 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.419e-15 Identity = 36/54 (66.67%), Postives = 42/54 (77.78%), Query Frame = 1 Query: 334 EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFTEKQAEQWWAANRARVYQQY 495 EWVEQDE GVYIT+ ALP G ++L+RVRFSR+KF E A WW NRAR+ QQY Sbjct: 320 EWVEQDEAGVYITIRALPDGTRELRRVRFSREKFGETNARLWWEQNRARIQQQY 373 HSP 2 Score: 75.0998 bits (183), Expect = 6.033e-13 Identity = 56/177 (31.64%), Postives = 82/177 (46.33%), Query Frame = 1 Query: 28 IKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSATIEQPSSPLTFQGAI---------PXXXXXXXXXXXXXFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFTEKQAEQWWAANRARVYQQYNVSMVDKSSVSI 531 IKSLT+Q+KDMA + GA ++ S + S A + S+ F+ A P F ++ + E+T E + EWV Q E GV IT V+LP G D+KR+RFSR+ F + QA++WWA N +V + YNV ++ SV + Sbjct: 40 IKSLTSQIKDMA-VKASGAYKSCKPCSGSSNQNKNRSYADSDVASNSGRFRYAYKRAGSGSSTPKILGKEMESRLKGFLSGEGTPESMSGRTESTV------FMEEEDELKEWVAQVEPGVLITFVSLPEGGNDMKRIRFSREMFDKWQAQKWWAENFDKVMELYNVQQFNQQSVPL 209
BLAST of DY257975 vs. ExPASy Swiss-Prot
Match: BRXL3_ARATH (Protein Brevis radix-like 3 OS=Arabidopsis thaliana GN=BRXL3 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.875e-14 Identity = 40/89 (44.94%), Postives = 55/89 (61.80%), Query Frame = 1 Query: 247 SPSQTEASHCEATTKNKNRTMKAEPAQGD------EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFTEKQAEQWWAANRARVYQQY 495 S ++TE S + + ++ + E + + EWVEQDE G+YIT+ ALP G ++L+RVRFSR KF E A WW NRAR+ QQY Sbjct: 281 SGTKTETSSTDGSARSSSVDRSEEVSVSNASDMESEWVEQDEPGIYITIRALPDGNRELRRVRFSRDKFGETHARLWWEQNRARIQQQY 369
BLAST of DY257975 vs. ExPASy Swiss-Prot
Match: BRXL1_ARATH (Protein Brevis radix-like 1 OS=Arabidopsis thaliana GN=BRXL1 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 5.457e-14 Identity = 52/174 (29.89%), Postives = 85/174 (48.85%), Query Frame = 1 Query: 19 KDVIKSLTAQLKDMAEMLPVGAVRN-----SNSFHSSPTPAWDVSSATIEQPSSPLTFQGAIPXXXXXXXXXXXXXFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFTEKQAEQWWAANRARVYQQYNVSMVDKSSV 525 K+ +KSLT Q+KDMA ++ S+S + P +D +S ++ P P + P D+R S + ++ + + E + EW+ Q E GV+IT V+LP G DLKR+RFSR+ F + QA++WW N R+ + YNV ++ ++ Sbjct: 31 KEAVKSLTTQIKDMASKFSGSHKQSKPTPGSSSSNLRKFPDFDTASESVPYPY-PGGSTSSTPAWDLPRSSYHQSGRPDSRFTSMYGGERESISAQSCDVVL--EDDEPKEWMAQVEPGVHITFVSLPSGGNDLKRIRFSREVFDKWQAQRWWGENYDRIVELYNVQRFNRQAL 201 HSP 2 Score: 74.3294 bits (181), Expect = 1.029e-12 Identity = 33/78 (42.31%), Postives = 50/78 (64.10%), Query Frame = 1 Query: 262 EASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFTEKQAEQWWAANRARVYQQY 495 +A+ +++++ +M EWVE+DE GVYIT+ LP G ++L+RVRFSR++F E A+ WW NR R+ QY Sbjct: 253 DAARITTSSRDEPPSMSNASEMQGEWVEEDEPGVYITIRQLPDGTRELRRVRFSRERFGEVHAKTWWEQNRDRIQTQY 330
BLAST of DY257975 vs. ExPASy Swiss-Prot
Match: BRXL3_ORYSJ (Putative protein Brevis radix-like 3 OS=Oryza sativa subsp. japonica GN=BRXL3 PE=3 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 5.107e-12 Identity = 61/187 (32.62%), Postives = 75/187 (40.11%), Query Frame = 1 Query: 19 KDVIKSLTAQLKDMAEMLP--------VGAVRNSNSFHSS----PTPAWDVSSA---TIEQPSSPLTFQGAIPXXXXXXXXXXXXXFGDNRSPS----QTEASHCEATTK---------NKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFTEKQAEQWWAANRARVYQQY 495 +D +KSLT+QLKDM A S SF S P P + SA T + A P + RS S Q +A T + E A EW Q E GV IT V LPGG DLKR+RFSR++F E +A+ WW NR R+ QY Sbjct: 26 RDAVKSLTSQLKDMVLKFSGSNKHQHYKAATAGSPSFRSRSYRRPYPGFIDDSAFMTTTRPGGEAYMYTRAAPPPPVRAASTSMATWDMTRSKSNRGWQQDAGRSPGGTTWIQSIEEEAGADDVTVVEDAVPREWTAQVEPGVQITFVTLPGGGNDLKRIRFSRERFGEDRAKVWWEHNRDRIQAQY 212
BLAST of DY257975 vs. ExPASy Swiss-Prot
Match: BRX_ARATH (Protein BREVIS RADIX OS=Arabidopsis thaliana GN=BRX PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.941e-11 Identity = 31/78 (39.74%), Postives = 48/78 (61.54%), Query Frame = 1 Query: 262 EASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFTEKQAEQWWAANRARVYQQY 495 +A+ ++++ +M EW+E+DE GVYIT+ L G ++L+RVRFSR++F E A+ WW NR R+ QY Sbjct: 266 DAARTTTSSRDDPPSMSNASEMQAEWIEEDEPGVYITIRQLSDGTRELRRVRFSRERFGEVHAKTWWEQNRERIQTQY 343
BLAST of DY257975 vs. ExPASy Swiss-Prot
Match: BRXL2_ORYSJ (Protein Brevis radix-like 2 OS=Oryza sativa subsp. japonica GN=BRXL2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.941e-11 Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = 1 Query: 259 TEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFTEKQAEQWWAANRARVYQQY 495 T +S EA+ N A + EWVEQDE GV IT+ G ++L+RVRFSR++F E++A+ WW NR R++ QY Sbjct: 336 TTSSRDEASVSISN----ASDLEATEWVEQDEPGVSITIREFGDGTRELRRVRFSRERFGEERAKVWWEQNRDRIHAQY 410
BLAST of DY257975 vs. ExPASy Swiss-Prot
Match: BRXL4_ORYSJ (Protein Brevis radix-like 4 OS=Oryza sativa subsp. japonica GN=BRXL4 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.632e-11 Identity = 34/66 (51.52%), Postives = 45/66 (68.18%), Query Frame = 1 Query: 313 AEPAQGD--EWVEQDETGVYITLVALPGGL-KDLKRVRFSRKKFTEKQAEQWWAANRARVYQQYNV 501 A PA+G+ EWV Q E GV IT V+L GG DLKR+RFSR+ + + QA++WW N R+ + YNV Sbjct: 78 ARPAEGEAREWVAQVEPGVQITFVSLAGGGGNDLKRIRFSREMYDKWQAQKWWGENNERIMELYNV 143 The following BLAST results are available for this feature:
BLAST of DY257975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257975 ID=DY257975; Name=DY257975; organism=Citrus clementina; type=EST; length=891bpback to top |