DY257981

Overview
NameDY257981
Unique NameDY257981
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length930
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10403 contig Ccv1_Contig10403:582..1511. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY257981 vs. ExPASy Swiss-Prot
Match: RBOHC_ARATH (Respiratory burst oxidase homolog protein C OS=Arabidopsis thaliana GN=RBOHC PE=2 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 8.836e-55
Identity = 98/116 (84.48%), Postives = 109/116 (93.97%), Query Frame = 1
Query:    1 VMNEVAELDHNNVIELHNYCTGVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 348
            +MNEVAE D N VIE+HNYCT VYEEGDARSALI MLQSLNHAKNGVD+VSGTRV SHFAKPNWRNVYKR+A++HP+++VGVFYCGAPALTKELRHLALDF+HKTST+F FHKENF
Sbjct:  790 IMNEVAERDANRVIEMHNYCTSVYEEGDARSALIHMLQSLNHAKNGVDIVSGTRVMSHFAKPNWRNVYKRIAMDHPNTKVGVFYCGAPALTKELRHLALDFTHKTSTRFSFHKENF 905          
BLAST of DY257981 vs. ExPASy Swiss-Prot
Match: RBOHC_SOLTU (Respiratory burst oxidase homolog protein C OS=Solanum tuberosum GN=RBOHC PE=1 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 1.154e-54
Identity = 97/116 (83.62%), Postives = 109/116 (93.97%), Query Frame = 1
Query:    1 VMNEVAELDHNNVIELHNYCTGVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 348
            +MNE AE+DH  VIE+HNYCT VYEEGDARSALI MLQSL+HAK+GVD+VSGTRVKSHFAKPNWRNVYKR+ALNHP+++VGVFYCGAPALTKEL+  AL+FSHKTSTKFDFHKENF
Sbjct:  823 IMNEAAEMDHKGVIEMHNYCTSVYEEGDARSALITMLQSLHHAKSGVDIVSGTRVKSHFAKPNWRNVYKRIALNHPEAKVGVFYCGAPALTKELKQHALNFSHKTSTKFDFHKENF 938          
BLAST of DY257981 vs. ExPASy Swiss-Prot
Match: RBOHD_SOLTU (Respiratory burst oxidase homolog protein D OS=Solanum tuberosum GN=RBOHD PE=1 SV=2)

HSP 1 Score: 208.764 bits (530), Expect = 3.712e-53
Identity = 96/116 (82.76%), Postives = 108/116 (93.10%), Query Frame = 1
Query:    1 VMNEVAELDHNNVIELHNYCTGVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 348
            +MNE+A +D + +IE+HNYCT VYEEGDARSALIAMLQS+NHAKNGVD+VSGTRVK+HFA+PNWRNVYKR+ALNH D+RVGVFYCGAPALTK L  LALDFSHKTSTKFDFHKENF
Sbjct:  743 LMNELAVMDCDGIIEMHNYCTSVYEEGDARSALIAMLQSINHAKNGVDIVSGTRVKTHFARPNWRNVYKRIALNHTDARVGVFYCGAPALTKVLGQLALDFSHKTSTKFDFHKENF 858          
BLAST of DY257981 vs. ExPASy Swiss-Prot
Match: RBOHA_ARATH (Respiratory burst oxidase homolog protein A OS=Arabidopsis thaliana GN=RBOHA PE=2 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 2.037e-51
Identity = 95/116 (81.90%), Postives = 104/116 (89.66%), Query Frame = 1
Query:    1 VMNEVAELDHNNVIELHNYCTGVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 348
            VM+EV E D  NVIELHNYCT VYEEGDARSALI MLQSLNHAK+GVDVVSGTRV SHFA+PNWR+V+KR+A+NHP +RVGVFYCGA  L KELRHL+LDFSHKTSTKF FHKENF
Sbjct:  787 VMDEVTETDRKNVIELHNYCTSVYEEGDARSALITMLQSLNHAKHGVDVVSGTRVMSHFARPNWRSVFKRIAVNHPKTRVGVFYCGAAGLVKELRHLSLDFSHKTSTKFIFHKENF 902          
BLAST of DY257981 vs. ExPASy Swiss-Prot
Match: RBOHD_ARATH (Respiratory burst oxidase homolog protein D OS=Arabidopsis thaliana GN=RBOHD PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 8.558e-50
Identity = 89/116 (76.72%), Postives = 102/116 (87.93%), Query Frame = 1
Query:    1 VMNEVAELDHNNVIELHNYCTGVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 348
            +M+E++ELD   +IELHNYCT VYEEGDAR ALIAMLQSL HAKNGVDVVSGTRVKSHFAKPNWR VYK++A+ HP  R+GVFYCG P + KEL++LALDFS KT+TKFDFHKENF
Sbjct:  806 IMDEISELDEEGIIELHNYCTSVYEEGDARVALIAMLQSLQHAKNGVDVVSGTRVKSHFAKPNWRQVYKKIAVQHPGKRIGVFYCGMPGMIKELKNLALDFSRKTTTKFDFHKENF 921          
BLAST of DY257981 vs. ExPASy Swiss-Prot
Match: RBOHG_ARATH (Putative respiratory burst oxidase homolog protein G OS=Arabidopsis thaliana GN=RBOHG PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.236e-48
Identity = 86/116 (74.14%), Postives = 104/116 (89.66%), Query Frame = 1
Query:    1 VMNEVAELDHNNVIELHNYCTGVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 348
            +MNE+AE D + VIELHN+CT VYEEGD RSALI MLQSLN+AKNG+D+V+GTRV SHFA+PNW+NVYK++A++HP + VGVFYCGAP LTKELR LAL+F+HKTST+F FHKENF
Sbjct:  748 IMNEIAERDKSKVIELHNHCTSVYEEGDVRSALIRMLQSLNYAKNGLDIVAGTRVMSHFARPNWKNVYKQIAMDHPGANVGVFYCGAPVLTKELRQLALEFTHKTSTRFSFHKENF 863          
BLAST of DY257981 vs. ExPASy Swiss-Prot
Match: RBOHB_SOLTU (Respiratory burst oxidase homolog protein B OS=Solanum tuberosum GN=RBOHB PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.781e-47
Identity = 85/116 (73.28%), Postives = 98/116 (84.48%), Query Frame = 1
Query:    1 VMNEVAELDHNNVIELHNYCTGVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 348
            VM+EV+E D   +IELHNYCT VYEEGDARSALI MLQS+  AK+GVD+VSGTRVK+HFA+PNWR V+KRV +NHPD R+GVFYCG   L  ELRHL+ DFSHKT TKF+FHKENF
Sbjct:  752 VMDEVSENDQEGLIELHNYCTSVYEEGDARSALITMLQSIQQAKSGVDIVSGTRVKTHFARPNWRQVFKRVTINHPDQRIGVFYCGPQGLVGELRHLSQDFSHKTGTKFEFHKENF 867          
BLAST of DY257981 vs. ExPASy Swiss-Prot
Match: RBOHB_ARATH (Respiratory burst oxidase homolog protein B OS=Arabidopsis thaliana GN=RBOHB PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 6.347e-45
Identity = 83/116 (71.55%), Postives = 99/116 (85.34%), Query Frame = 1
Query:    1 VMNEVAELDHNNVIELHNYCTGVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 348
            VMNEVAE D   +IELHNYCT VYEEGDARSALI MLQSL+HAK+G+D+VSGTRV++HFA+PNWR+V+K VA+NH + RVGVFYCG   +  EL+ LA DFS KT+TKF+FHKENF
Sbjct:  728 VMNEVAEYDSEGMIELHNYCTSVYEEGDARSALITMLQSLHHAKSGIDIVSGTRVRTHFARPNWRSVFKHVAVNHVNQRVGVFYCGNTCIIGELKRLAQDFSRKTTTKFEFHKENF 843          
BLAST of DY257981 vs. ExPASy Swiss-Prot
Match: RBOHA_SOLTU (Respiratory burst oxidase homolog protein A OS=Solanum tuberosum GN=RBOHA PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.120e-41
Identity = 77/116 (66.38%), Postives = 94/116 (81.03%), Query Frame = 1
Query:    1 VMNEVAELDHNNVIELHNYCTGVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 348
            VMNEVAELD   VIE+HNY T VYEEGDARSALI M+Q+LNHAKNGVD+VSGT V++HFA+PNWR V+ +    H ++R+GVFYCGAP L KEL  L  +F+ K +TKF+FHKE+F
Sbjct:  848 VMNEVAELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDIVSGTSVRTHFARPNWRKVFSKTLTKHANARIGVFYCGAPILAKELSKLCKEFNQKGTTKFEFHKEHF 963          
BLAST of DY257981 vs. ExPASy Swiss-Prot
Match: RBOHF_ARATH (Respiratory burst oxidase homolog protein F OS=Arabidopsis thaliana GN=RBOHF PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 9.484e-41
Identity = 77/116 (66.38%), Postives = 94/116 (81.03%), Query Frame = 1
Query:    1 VMNEVAELDHNNVIELHNYCTGVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 348
            VMNEVAELD   VIE+HNY T VYEEGDARSALI M+Q+LNHAKNGVD+VSGTRV++HFA+PNW+ V  +++  H ++R+GVFYCG P L KEL  L   F+ K STKF+FHKE+F
Sbjct:  829 VMNEVAELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDIVSGTRVRTHFARPNWKKVLTKLSSKHCNARIGVFYCGVPVLGKELSKLCNTFNQKGSTKFEFHKEHF 944          
The following BLAST results are available for this feature:
BLAST of DY257981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
RBOHC_ARATH8.836e-5584.48Respiratory burst oxidase homolog protein C OS=Ara... [more]
RBOHC_SOLTU1.154e-5483.62Respiratory burst oxidase homolog protein C OS=Sol... [more]
RBOHD_SOLTU3.712e-5382.76Respiratory burst oxidase homolog protein D OS=Sol... [more]
RBOHA_ARATH2.037e-5181.90Respiratory burst oxidase homolog protein A OS=Ara... [more]
RBOHD_ARATH8.558e-5076.72Respiratory burst oxidase homolog protein D OS=Ara... [more]
RBOHG_ARATH1.236e-4874.14Putative respiratory burst oxidase homolog protein... [more]
RBOHB_SOLTU6.781e-4773.28Respiratory burst oxidase homolog protein B OS=Sol... [more]
RBOHB_ARATH6.347e-4571.55Respiratory burst oxidase homolog protein B OS=Ara... [more]
RBOHA_SOLTU1.120e-4166.38Respiratory burst oxidase homolog protein A OS=Sol... [more]
RBOHF_ARATH9.484e-4166.38Respiratory burst oxidase homolog protein F OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2BH04ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257981 ID=DY257981; Name=DY257981; organism=Citrus clementina; type=EST; length=930bp
GTGATGAATGAGGTGGCTGAATTGGACCACAACAATGTCATAGAGCTTCA
CAATTACTGCACCGGCGTTTATGAAGAAGGTGATGCTCGCTCAGCTCTCA
TTGCCATGCTTCAGTCCCTCAATCACGCCAAGAATGGCGTTGACGTTGTC
TCTGGAACACGCGTTAAGTCACATTTCGCCAAGCCTAATTGGCGCAATGT
GTACAAACGCGTTGCTCTCAATCACCCTGATTCTAGAGTTGGTGTTTTCT
ATTGCGGGGCACCGGCACTGACAAAAGAGCTACGACACCTAGCTTTGGAT
TTCTCTCACAAGACAAGCACCAAGTTTGATTTCCATAAAGAAAACTTCTA
GATCAAGTCCCTCCTGATTTCCACCATTATATATCATCTCTTCCACTCCG
TTTTCTCGTACAAAGCCTGTGGCATGGCCCACTGGCCCTTATGTTTATAG
AAAAATCATATCAATATTTGTTTGGTACCCAGTTGATTTTGCTGCAAAAT
CACTAATAGAGAGCATTAGAAATATCAAGCGGACAAAGGTTGGTGGGTAG
TTGATATCAAGGCCACACCACACTGGACACACAACACATGGCAAGGGAGA
TATAGGCCGAAAAAGGGGTTTAGCAAAAAAGTCATGCTCAGCCATTTCCT
TTTGTTAAATGTTGTGGTCCAAGCCAATAATTTTGTGAGAAATAGTAATA
ATGGCAGCCTGGCAGCCACCACTAATAATGGCAGCCTGGCAGCCACCACC
AACTCAGTCCTTAACAGCCAAATGTAAAAGGGTTTTTGTTTTGTTTTCTT
TTCTTTTTGGTTGGAGTAATTTGTTGTTTTATTTGATTAATTAAAGTTGC
GATGTNCATTGAATGGGGTCGTAAGCCCTTTNAAATGTAAGTATGTATTG
AATAATTAGTTTCGGAGTACACTTTTACCC
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