DY258008
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP1S2_DICDI (AP-1 complex subunit sigma-2 OS=Dictyostelium discoideum GN=ap1s2 PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.713e-59 Identity = 102/141 (72.34%), Postives = 127/141 (90.07%), Query Frame = 3 Query: 120 HFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVE 542 HF+LL+SRQGK RLTKWYSP+T KE+S+ RE+ ++L R PKLCNF+EW+ YK+++KRYASLYF +C D+EDNEL +LEIIHH+VEILDRYFG+VCELDLIFNFHKAYYILDE+++AGELQE+SKKTV RLI+ QD+L+E Sbjct: 4 HFLLLLSRQGKTRLTKWYSPFTNKEKSRFTREIGNMVLNRPPKLCNFLEWKEYKIIFKRYASLYFVVCCDREDNELIVLEIIHHFVEILDRYFGNVCELDLIFNFHKAYYILDELIMAGELQETSKKTVLRLISQQDTLLE 144
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP1S2_MOUSE (AP-1 complex subunit sigma-2 OS=Mus musculus GN=Ap1s2 PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.524e-50 Identity = 92/146 (63.01%), Postives = 113/146 (77.40%), Query Frame = 3 Query: 117 IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVETAKE 554 + F+LL SRQGK+RL KWY P + KE+ K+ REL +L R PK+C+F+EWR K+VYKRYASLYFC I+ +DNEL LEIIH YVE+LD+YFGSVCELD+IFNF KAY+ILDE L+ GE+QE+SKK V + I D L E AKE Sbjct: 1 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQETSKKNVLKAIEQADLLQEDAKE 146
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP1S2_BOVIN (AP-1 complex subunit sigma-2 OS=Bos taurus GN=AP1S2 PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.524e-50 Identity = 92/146 (63.01%), Postives = 113/146 (77.40%), Query Frame = 3 Query: 117 IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVETAKE 554 + F+LL SRQGK+RL KWY P + KE+ K+ REL +L R PK+C+F+EWR K+VYKRYASLYFC I+ +DNEL LEIIH YVE+LD+YFGSVCELD+IFNF KAY+ILDE L+ GE+QE+SKK V + I D L E AKE Sbjct: 1 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQETSKKNVLKAIEQADLLQEDAKE 146
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP1S2_HUMAN (AP-1 complex subunit sigma-2 OS=Homo sapiens GN=AP1S2 PE=1 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.607e-49 Identity = 92/154 (59.74%), Postives = 115/154 (74.68%), Query Frame = 3 Query: 117 IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNI 578 + F+LL SRQGK+RL KWY P + KE+ K+ REL +L R PK+C+F+EWR K+VYKRYASLYFC I+ +DNEL LEIIH YVE+LD+YFGSVCELD+IFNF KAY+ILDE L+ GE+QE+SKK V + I D L E A+ S + I Sbjct: 1 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQETSKKNVLKAIEQADLLQEEAETPRSVLEEI 154
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP1S1_SCHPO (AP-1 complex subunit sigma-1 OS=Schizosaccharomyces pombe GN=SPAP27G11.06c PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.777e-48 Identity = 91/160 (56.88%), Postives = 124/160 (77.50%), Query Frame = 3 Query: 117 IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 596 I F LL+SRQGKVRL KW++ + KER+K+IR++S +++TR PK+CNFVE++G K+VY+RYASL+F I+Q+DNEL ILE+IH +VE LD+YFG+VCELDLIFNF KAYY+++E+L+AGELQESSK V + A D+ E A Q S+ ++ K Sbjct: 3 IKFFLLVSRQGKVRLAKWFNTLSIKERAKIIRDVSSLVITRKPKMCNFVEYKGEKIVYRRYASLFFVCGIEQDDNELIILEVIHKFVECLDKYFGNVCELDLIFNFEKAYYVMEELLLAGELQESSKTNVLSAVLAGDAESE-ADAQQDSLQKLVGSVKK 161
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP1S1_MOUSE (AP-1 complex subunit sigma-1A OS=Mus musculus GN=Ap1s1 PE=1 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.031e-48 Identity = 90/155 (58.06%), Postives = 117/155 (75.48%), Query Frame = 3 Query: 114 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNI 578 M+ F+LL SRQGK+RL KWY + KER K++REL V+L R PK+C+F+EWR KVVYKRYASLYFC I+ +DNEL LE+IH YVE+LD+YFGSVCELD+IFNF KAY+ILDE L+ G++Q++SKK+V + I D L E + S + + Sbjct: 1 MMRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMGGDVQDTSKKSVLKAIEQADLLQEEDESPRSVLEEM 155
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP1S1_HUMAN (AP-1 complex subunit sigma-1A OS=Homo sapiens GN=AP1S1 PE=1 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.031e-48 Identity = 90/155 (58.06%), Postives = 117/155 (75.48%), Query Frame = 3 Query: 114 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNI 578 M+ F+LL SRQGK+RL KWY + KER K++REL V+L R PK+C+F+EWR KVVYKRYASLYFC I+ +DNEL LE+IH YVE+LD+YFGSVCELD+IFNF KAY+ILDE L+ G++Q++SKK+V + I D L E + S + + Sbjct: 1 MMRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMGGDVQDTSKKSVLKAIEQADLLQEEDESPRSVLEEM 155
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP1S3_MOUSE (AP-1 complex subunit sigma-3 OS=Mus musculus GN=Ap1s3 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 5.170e-48 Identity = 86/147 (58.50%), Postives = 113/147 (76.87%), Query Frame = 3 Query: 114 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVETAKE 554 MIHF+LL SRQGK+RL KWY+ KER K+ R++ +L+RG + +F++W+ K+VYKRYASLYFC I+ +DNEL LEI+H YVE+LD+YFG+VCELD+IFNF KAY+ILDE +I GE+QE+SKKT + I D L ET +E Sbjct: 1 MIHFILLFSRQGKLRLQKWYTTLPDKERKKITRDIIQTVLSRGHRTSSFIDWKELKLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIGGEIQETSKKTAVKAIEDSDMLQETMEE 147
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP1S1_BOVIN (AP-1 complex subunit sigma-1A OS=Bos taurus GN=AP1S1 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.152e-47 Identity = 89/154 (57.79%), Postives = 116/154 (75.32%), Query Frame = 3 Query: 117 IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNI 578 + F+LL SRQGK+RL KWY + KER K++REL V+L R PK+C+F+EWR KVVYKRYASLYFC I+ +DNEL LE+IH YVE+LD+YFGSVCELD+IFNF KAY+ILDE L+ G++Q++SKK+V + I D L E + S + + Sbjct: 1 MRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMGGDVQDTSKKSVLKAIEQADLLQEEDESPRSVLEEM 154
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP1S3_HUMAN (AP-1 complex subunit sigma-3 OS=Homo sapiens GN=AP1S3 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.466e-47 Identity = 86/145 (59.31%), Postives = 110/145 (75.86%), Query Frame = 3 Query: 114 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVETA 548 MIHF+LL SRQGK+RL KWY KER K+ RE+ +IL+RG + +FV+W+ K+VYKRYASLYFC I+ +DNEL LEI+H YVE+LD+YFG+VCELD+IFNF KAY+ILDE +I GE+QE+SKK + I D L E + Sbjct: 1 MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIGGEIQETSKKIAVKAIEDSDMLQEVS 145 The following BLAST results are available for this feature:
BLAST of DY258008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258008 ID=DY258008; Name=DY258008; organism=Citrus clementina; type=EST; length=713bpback to top |