DY258025
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258025 vs. ExPASy Swiss-Prot
Match: SRP19_ARATH (Signal recognition particle 19 kDa protein OS=Arabidopsis thaliana GN=SRP19 PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.302e-48 Identity = 88/115 (76.52%), Postives = 101/115 (87.83%), Query Frame = 1 Query: 121 MDAQTARIKKWVILYPVYINSKKTIAEGRRISASKACENPTCIEIADCCQYLKIPHAIEIDKAYPRDFMQRGRVRVMLKREDGTFVNPAISSRKQLMLHVAELVPRHPNRTKKQE 465 MD+ T IKKWV++YPVYINSKKT+AEGRRIS SK+CENP CIEI+DCC++LK+P A+EIDKAYPRDFMQ GRVRV LKREDGT +NPAI+SRK LM +AELVPRHP R KKQE Sbjct: 1 MDSGTINIKKWVVIYPVYINSKKTVAEGRRISVSKSCENPNCIEISDCCKHLKLPSAVEIDKAYPRDFMQVGRVRVQLKREDGTLLNPAITSRKHLMQKIAELVPRHPERVKKQE 115
BLAST of DY258025 vs. ExPASy Swiss-Prot
Match: SRP19_ORYSJ (Signal recognition particle 19 kDa protein OS=Oryza sativa subsp. japonica GN=SRP19 PE=1 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 5.829e-45 Identity = 80/112 (71.43%), Postives = 100/112 (89.29%), Query Frame = 1 Query: 142 IKKWVILYPVYINSKKTIAEGRRISASKACENPTCIEIADCCQYLKIPHAIEIDKAYPRDFMQRGRVRVMLKREDGTFVNPAISSRKQLMLHVAELVPRHPNRTKKQEPAST 477 IKKW ++YPVY+NSKKT+AEGRRI++ KAC +PTC+EIADCC +LKIPHAIE+DKAYPRDF Q GRVRV LK++DG+ VNPAI ++KQLM+ +AELVP+H RTKKQEPA++ Sbjct: 10 IKKWNVIYPVYLNSKKTVAEGRRIASGKACPDPTCVEIADCCSHLKIPHAIELDKAYPRDFFQVGRVRVQLKKDDGSPVNPAIKTKKQLMIQIAELVPKHHGRTKKQEPAAS 121
BLAST of DY258025 vs. ExPASy Swiss-Prot
Match: SRP19_MOUSE (Signal recognition particle 19 kDa protein OS=Mus musculus GN=Srp19 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.635e-21 Identity = 53/108 (49.07%), Postives = 71/108 (65.74%), Query Frame = 1 Query: 148 KWVILYPVYINSKKTIAEGRRISASKACENPTCIEIADCCQYLKIPHAIEIDKAYP----RDFMQRGRVRVMLKREDGTFVNPAISSRKQLMLHVAELVPRHPNRTKK 459 +++ +YP Y+N+KKTIAEGRRI SKA ENPT EI D C + + +E +K Y RD RGRVRV LK+EDG+ SRK +ML+VAE++P+ RT+K Sbjct: 14 RFIFIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNAFLEKNKMYSREWNRDVQFRGRVRVQLKQEDGSLCLVQFPSRKSVMLYVAEMIPKLKTRTQK 121
BLAST of DY258025 vs. ExPASy Swiss-Prot
Match: SRP19_PONAB (Signal recognition particle 19 kDa protein OS=Pongo abelii GN=SRP19 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 7.666e-21 Identity = 52/108 (48.15%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 148 KWVILYPVYINSKKTIAEGRRISASKACENPTCIEIADCCQYLKIPHAIEIDKAYP----RDFMQRGRVRVMLKREDGTFVNPAISSRKQLMLHVAELVPRHPNRTKK 459 +++ +YP Y+N+KKTIAEGRRI SKA ENPT EI D C + + +E +K Y RD RGRVRV LK+EDG+ SRK +ML+ AE++P+ RT+K Sbjct: 14 RFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNVFLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQK 121
BLAST of DY258025 vs. ExPASy Swiss-Prot
Match: SRP19_HUMAN (Signal recognition particle 19 kDa protein OS=Homo sapiens GN=SRP19 PE=1 SV=3) HSP 1 Score: 100.908 bits (250), Expect = 7.666e-21 Identity = 52/108 (48.15%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 148 KWVILYPVYINSKKTIAEGRRISASKACENPTCIEIADCCQYLKIPHAIEIDKAYP----RDFMQRGRVRVMLKREDGTFVNPAISSRKQLMLHVAELVPRHPNRTKK 459 +++ +YP Y+N+KKTIAEGRRI SKA ENPT EI D C + + +E +K Y RD RGRVRV LK+EDG+ SRK +ML+ AE++P+ RT+K Sbjct: 14 RFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNVFLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQK 121
BLAST of DY258025 vs. ExPASy Swiss-Prot
Match: SRP19_BOVIN (Signal recognition particle 19 kDa protein OS=Bos taurus GN=SRP19 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.666e-21 Identity = 52/108 (48.15%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 148 KWVILYPVYINSKKTIAEGRRISASKACENPTCIEIADCCQYLKIPHAIEIDKAYP----RDFMQRGRVRVMLKREDGTFVNPAISSRKQLMLHVAELVPRHPNRTKK 459 +++ +YP Y+N+KKTIAEGRRI SKA ENPT EI D C + + +E +K Y RD RGRVRV LK+EDG+ SRK +ML+ AE++P+ RT+K Sbjct: 14 RFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCAAVGLNVFLEKNKMYSREWNRDLQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQK 121
BLAST of DY258025 vs. ExPASy Swiss-Prot
Match: SRP19_CAEEL (Probable signal recognition particle 19 kDa protein OS=Caenorhabditis elegans GN=F37F2.2 PE=2 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 2.821e-15 Identity = 44/106 (41.51%), Postives = 63/106 (59.43%), Query Frame = 1 Query: 145 KKWVILYPVYINSKKTIAEGRRISASKACENPTCIEIADCCQYLKIPHAIEIDKAYP----RDFMQRGRVRVMLKREDGTFVNPAISSRKQLMLHVAELVPRHPNR 450 K+W+++YP YI+ KKT +GR+IS A ENPT +EI D + +E K YP RDF +GRVRV LK +DGT + +R ++ VAE++P+ R Sbjct: 13 KRWIVIYPAYIDKKKTAKQGRKISQILAVENPTSVEIHDVLAAVGFNPLLERTKCYPRDGERDFEVQGRVRVQLKNDDGTAKHEQ-KTRDEIFKMVAEMIPKLKTR 117
BLAST of DY258025 vs. ExPASy Swiss-Prot
Match: SEC65_DEBHA (Signal recognition particle SEC65 subunit OS=Debaryomyces hansenii GN=SEC65 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.685e-15 Identity = 39/117 (33.33%), Postives = 69/117 (58.97%), Query Frame = 1 Query: 130 QTARIKKWVILYPVYINSKKTIAEGRRISASKACENPTCIEIADCCQYLKIPHAIEIDKAYPRDFMQRGRVRVMLK--REDGTFVNPAISSRKQLMLHVAELVPRHPNRTKKQEPAS 474 + A +KK+ I+YP Y + ++ +GRR+S SKA NP I+D C++ +P +E+DK +P+DF GRVRV++K ++G V+ +++ ++ +A+ + HP P S Sbjct: 80 ERAELKKFQIIYPCYFDKSRSHKDGRRVSESKAVSNPLAKTISDACRHYNLPVMLELDKTHPQDFGNPGRVRVLIKDNNKNGMPVDSRFKTKRAVLNIIADYLKTHPTTLASIGPKS 196
BLAST of DY258025 vs. ExPASy Swiss-Prot
Match: SEC65_CANAL (Signal recognition particle SEC65 subunit OS=Candida albicans GN=SEC65 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.685e-15 Identity = 38/119 (31.93%), Postives = 69/119 (57.98%), Query Frame = 1 Query: 124 DAQTARIKKWVILYPVYINSKKTIAEGRRISASKACENPTCIEIADCCQYLKIPHAIEIDKAYPRDFMQRGRVRVMLKR--EDGTFVNPAISSRKQLMLHVAELVPRHPNRTKKQEPAS 474 + + + ++ I+YP Y + ++ +GRR+S +A ENP I+D C+ L +P +E+DK +P+DF GRV+V+ K ++G +NP + +++ L +AE + HP + P S Sbjct: 84 EEEKKQFDQFQIIYPCYFDINRSHKQGRRVSIDRAVENPLATTISDACRRLGLPVFLELDKTHPQDFGNPGRVKVLFKAVFDNGKLINPKLQTKRVLFNVIAEYLSEHPTTLESIGPKS 202
BLAST of DY258025 vs. ExPASy Swiss-Prot
Match: SEC65_YARLI (Signal recognition particle SEC65 subunit OS=Yarrowia lipolytica GN=SEC65 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.813e-15 Identity = 39/110 (35.45%), Postives = 62/110 (56.36%), Query Frame = 1 Query: 124 DAQTARIKKWVILYPVYINSKKTIAEGRRISASKACENPTCIEIADCCQYLKIPHAIEIDKAYPRDFMQRGRVRVMLKREDGTFVNP-AISSRKQLMLHVAELVPRHPNR 450 + Q + K W I+YPVY + KT+ EGRR+ A ENP IA+ C+ L +P E K +P+D+ GRVRV LK + + P ++ +++ L +A+ + HP + Sbjct: 112 EIQESDFKDWQIVYPVYFDKNKTVGEGRRVPLELAVENPLGQTIAEACKMLTLPSIYEAHKTHPKDWANPGRVRVQLKDDPALGLPPHSVKNKRHLFRLIAQYMKEHPTK 221 The following BLAST results are available for this feature:
BLAST of DY258025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258025 ID=DY258025; Name=DY258025; organism=Citrus clementina; type=EST; length=744bpback to top |