DY258057

Overview
NameDY258057
Unique NameDY258057
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1233
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7998 contig Ccv1_Contig7998:483..1715. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258057 vs. ExPASy Swiss-Prot
Match: HMCS_ARATH (Hydroxymethylglutaryl-CoA synthase OS=Arabidopsis thaliana GN=HMGS PE=2 SV=2)

HSP 1 Score: 570.852 bits (1470), Expect = 5.559e-162
Identity = 277/359 (77.16%), Postives = 315/359 (87.74%), Query Frame = 2
Query:    2 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFMFHSPYNKLVQKSFARSLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALGSLIHNKHSELDGQRVVFVSYGSGLTATMFSLKLSEGHHPLSLSNILTGYEWWQGSENQGRDFPPENLVEIMK 1078
            EDVISMS  AVT+L EKYKIDP QIGRLEVGSETVIDKSKSIKTFLMQ+FEK GNTD+EGVDSTNACYGGTAAL NCVNWVES+SWDGRYGLV+CTDSAVYAEGPARPTGGAAA+ ML+GPDAP+ FESKLR SHM+H YDFYKPNLASEYPVVDGKLSQTCYLMALD+CYK LC+K+EK+EGK+FS+++ADY +FHSPYNKLVQKSFAR L+NDF+RNASS+DEAAKEK  P+S+L+ DESYQSRDLEKVSQQ+AKP YDAKVQP+TLIPK+VGNMYTASLYAA  SLIH KH++L G+RVV  SYGSG TATMFSL+L++   P S+SNI +  +   G      ++ PE  VE MK
Sbjct:   51 EDVISMSFNAVTSLFEKYKIDPNQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAVYAEGPARPTGGAAAIAMLIGPDAPIVFESKLRASHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKIEGKEFSINDADYIVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLTLDESYQSRDLEKVSQQIAKPFYDAKVQPTTLIPKEVGNMYTASLYAAFASLIHKKHNDLAGKRVVMFSYGSGSTATMFSLRLNDNKPPFSISNIASVMD-VGGKLKARHEYAPEKFVETMK 408          
BLAST of DY258057 vs. ExPASy Swiss-Prot
Match: HMCSA_DICDI (Hydroxymethylglutaryl-CoA synthase A OS=Dictyostelium discoideum GN=hgsA PE=1 SV=2)

HSP 1 Score: 359.762 bits (922), Expect = 1.947e-98
Identity = 175/322 (54.35%), Postives = 225/322 (69.88%), Query Frame = 2
Query:    2 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFMFHSPYNKLVQKSFARSLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALGSLIHNKHSELDGQRVVFVSYGSGLTATMFSLKLSE 967
            ED+ S+SL AV NL++K+ +DP  IGRLEVG+ETVIDKSKS+KT LM +F K GNT I+G+D+ NACYGGT+AL N + W+ESS WDGR  +VV  D AVY +GPARPTGGA  V ML+GP+AP+ FES LRG HM + YDFYKP++ SEYP VDGKLS +CY  A+D CY      +EK  GK FSL   D+ +FHSPYNKLVQKSF R L+NDF+ N +    A+ E    +  +  +++Y    LEK    + K  Y  KV P+TL+ KQ+GN Y  S Y+ L SL+  K ++L G+RV+  SYGSGL A+ FS K+ +
Sbjct:   53 EDIYSLSLNAVNNLMDKFNVDPNSIGRLEVGTETVIDKSKSVKTVLMDLFAKHGNTSIDGIDTINACYGGTSALHNALQWMESSYWDGRNAIVVAGDIAVYEKGPARPTGGAGVVAMLIGPNAPITFESGLRGVHMENVYDFYKPDMDSEYPRVDGKLSISCYFRAIDNCYNRYAKAFEKKYGKSFSLDQVDFALFHSPYNKLVQKSFGRMLYNDFLNNPNDSRYASLE---AYKNVKPEDTYFDSVLEKALSAITKNDYATKVAPTTLLAKQLGNTYCGSTYSGLLSLLDEKSNDLVGKRVLTFSYGSGLAASAFSFKVEK 371          
BLAST of DY258057 vs. ExPASy Swiss-Prot
Match: HMCS1_PONAB (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Pongo abelii GN=HMGCS1 PE=2 SV=1)

HSP 1 Score: 353.984 bits (907), Expect = 1.068e-96
Identity = 180/340 (52.94%), Postives = 236/340 (69.41%), Query Frame = 2
Query:    2 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE---KLEG--KQFSLSNADYFMFHSPYNKLVQKSFARSLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALGS-LIHNKHSELDGQRVVFVSYGSGLTATMFSLKLSEGHHPLSLSNILT 1003
            ED+ S+ +T V NL+E+  +    IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTDIEG+D+TNACYGGTAA+FN VNW+ESSSWDGRY LVV  D AVYA G ARPTGG  AV +L+GP+AP+ FE  LRG+HM HAYDFYKP++ SEYP+VDGKLS  CYL ALD CY   C K     + EG  K F+L++  + +FHSPY KLVQKS AR L NDF+ + +    +    L  F  +  +++Y  RD+EK   + +  L+  K + S L+  Q GNMYT+S+Y +L S L      +L G+R+   SYGSGL AT++SLK+++   P S  + +T
Sbjct:   63 EDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVALLIGPNAPLIFERGLRGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIRAQWQKEGNDKDFTLNDFGFMIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVEKAFMKASSELFSQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVFSYGSGLAATLYSLKVTQDATPGSALDKIT 402          
BLAST of DY258057 vs. ExPASy Swiss-Prot
Match: HMCS1_HUMAN (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Homo sapiens GN=HMGCS1 PE=1 SV=2)

HSP 1 Score: 353.984 bits (907), Expect = 1.068e-96
Identity = 180/340 (52.94%), Postives = 236/340 (69.41%), Query Frame = 2
Query:    2 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE---KLEG--KQFSLSNADYFMFHSPYNKLVQKSFARSLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALGS-LIHNKHSELDGQRVVFVSYGSGLTATMFSLKLSEGHHPLSLSNILT 1003
            ED+ S+ +T V NL+E+  +    IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTDIEG+D+TNACYGGTAA+FN VNW+ESSSWDGRY LVV  D AVYA G ARPTGG  AV +L+GP+AP+ FE  LRG+HM HAYDFYKP++ SEYP+VDGKLS  CYL ALD CY   C K     + EG  K F+L++  + +FHSPY KLVQKS AR L NDF+ + +    +    L  F  +  +++Y  RD+EK   + +  L+  K + S L+  Q GNMYT+S+Y +L S L      +L G+R+   SYGSGL AT++SLK+++   P S  + +T
Sbjct:   63 EDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVALLIGPNAPLIFERGLRGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKEGNDKDFTLNDFGFMIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVEKAFMKASSELFSQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVFSYGSGLAATLYSLKVTQDATPGSALDKIT 402          
BLAST of DY258057 vs. ExPASy Swiss-Prot
Match: HMCS1_BLAGE (Hydroxymethylglutaryl-CoA synthase 1 OS=Blattella germanica GN=HMGCS-1 PE=2 SV=1)

HSP 1 Score: 353.984 bits (907), Expect = 1.068e-96
Identity = 178/322 (55.28%), Postives = 231/322 (71.74%), Query Frame = 2
Query:    2 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFMFHSPYNKLVQKSFARSLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALGSLIHNKHS-ELDGQRVVFVSYGSGLTATMFSLKLS 964
            ED+ S+ LT V+ L+E++ I   QIGRLEVG+ET++DKSKS+KT LMQ+F+   NTDIEGVD+ NACYGGT+ALFN ++WVESSSWDGRY LVV  D AVYA+G ARPTGGA AV MLVG +AP+ F+  +R SHM HAYDFYKP+L+S YP VDGKLS  CYL ALD CY+  CSK +K  G++F +   D  +FH+PY KLVQKS AR + NDF+R +          L     +  +++Y  R++EK     +K +++ K +PS L+  QVGNMYT SLY  L SL+ +K + EL G+RV   SYGSGL ++MFSL++S
Sbjct:   52 EDINSLCLTVVSRLMERWSIPYSQIGRLEVGTETLLDKSKSVKTVLMQLFKD--NTDIEGVDTVNACYGGTSALFNAISWVESSSWDGRYALVVAGDIAVYAKGSARPTGGAGAVAMLVGANAPLVFDRGVRSSHMQHAYDFYKPDLSSLYPTVDGKLSIQCYLSALDHCYQLYCSKIQKQLGEKFDIERLDAVLFHAPYCKLVQKSLARLVLNDFVRASEEERTTKYSSLEALKGVKLEDTYFDREVEKAVMTYSKNMFEEKTKPSLLLANQVGNMYTPSLYGGLVSLLVSKSAQELAGKRVALFSYGSGLASSMFSLRIS 371          
BLAST of DY258057 vs. ExPASy Swiss-Prot
Match: HMCS2_HUMAN (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Homo sapiens GN=HMGCS2 PE=1 SV=1)

HSP 1 Score: 346.665 bits (888), Expect = 1.705e-94
Identity = 177/368 (48.10%), Postives = 240/368 (65.22%), Query Frame = 2
Query:    2 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL-----EGKQFSLSNADYFMFHSPYNKLVQKSFARSLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALGSLI-HNKHSELDGQRVVFVSYGSGLTATMFSLKLSEGHHPLS-LSNILTGYEWWQGSENQGRDFPPENLVEIMKPK 1084
            ED+ S+ LT V  L+E+ ++    +GRLEVG+ET+IDKSK++KT LM++F+  GNTDIEG+D+TNACYGGTA+LFN  NW+ESSSWDGRY +VVC D AVY  G ARPTGGA AV ML+GP AP+A E  LRG+HM + YDFYKPNLASEYP+VDGKLS  CYL ALD CY     K +         + F+L +  Y +FH+P+ K+VQKS AR +FNDF+  +S    +  + L  F  L  +++Y ++DL+K   + ++ ++D K + S  +    GNMYT+SLY  L SL+ H+   EL G R+   SYGSGL A+ FS ++S+   P S L  +++            +   PE   EIM  +
Sbjct:  100 EDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIAVYPSGNARPTGGAGAVAMLIGPKAPLALERGLRGTHMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYRKKIQNQWKQAGSDRPFTLDDLQYMIFHTPFCKMVQKSLARLMFNDFLSASSDTQTSLYKGLEAFGGLKLEDTYTNKDLDKALLKASQDMFDKKTKASLYLSTHNGNMYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASFFSFRVSQDAAPGSPLDKLVSSTSDLPKRLASRKCVSPEEFTEIMNQR 467          
BLAST of DY258057 vs. ExPASy Swiss-Prot
Match: HMCS1_MOUSE (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Mus musculus GN=Hmgcs1 PE=1 SV=1)

HSP 1 Score: 346.665 bits (888), Expect = 1.705e-94
Identity = 179/341 (52.49%), Postives = 240/341 (70.38%), Query Frame = 2
Query:    2 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCY----KCLCSKYEKLEG--KQFSLSNADYFMFHSPYNKLVQKSFARSLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALGS-LIHNKHSELDGQRVVFVSYGSGLTATMFSLKLSEGHHPLSLSNILT 1003
            ED+ S+ LT V  L+E++ +    IGRLEVG+ET+IDKSKS+K+ LMQ+FE+ GNTDIEG+D+TNACYGGTAA+FN VNWVESSSWDGRY LVV  D A+YA G ARPTGG  AV +L+GP+AP+ F+  LRG+HM HAYDFYKP++ SEYPVVDGKLS  CYL ALD CY    K + ++++K EG  K F+L++  + +FHSPY KLVQKS AR   NDF+ + +    +    L  F  +  +++Y  RD+EK   + +  L++ K + S L+  Q GNMYT+S+Y +L S L      +L G+RV   SYGSGL AT++SLK+++   P S  + +T
Sbjct:   63 EDINSLCLTVVQKLMERHSLSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAVNWVESSSWDGRYALVVAGDIAIYATGNARPTGGVGAVALLIGPNAPLIFDRGLRGTHMQHAYDFYKPDMLSEYPVVDGKLSIQCYLSALDRCYSVYRKKIRAQWQK-EGKDKDFTLNDFGFMIFHSPYCKLVQKSLARMFLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVEKAFMKASSELFNQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRVGVFSYGSGLAATLYSLKVTQDATPGSALDKIT 402          
BLAST of DY258057 vs. ExPASy Swiss-Prot
Match: HMCS2_MOUSE (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Mus musculus GN=Hmgcs2 PE=1 SV=2)

HSP 1 Score: 345.895 bits (886), Expect = 2.909e-94
Identity = 178/368 (48.37%), Postives = 239/368 (64.95%), Query Frame = 2
Query:    2 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL-----EGKQFSLSNADYFMFHSPYNKLVQKSFARSLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALGSLI-HNKHSELDGQRVVFVSYGSGLTATMFSLKLSEGHHPLS-LSNILTGYEWWQGSENQGRDFPPENLVEIMKPK 1084
            ED+ S+ LT V  L+E+ K+    +GRLEVG+ET+IDKSK++KT LM++F+  GNTDIEG+D+TNACYGGTA+LFN  NW+ESS WDGRY LVVC D AVY  G ARPTGGA AV ML+GP AP+  E  LRG+HM +AYDFYKPNLASEYP+VDGKLS  CYL ALD CY     K +         + F+L +  Y +FH+P+ K+VQKS AR +FNDF+ ++S       + L  F  L  +E+Y ++D++K   + +  +++ K + S  +    GNMYT+SLY  L SL+ H+   EL G R+   SYGSGL A+ FS ++S+   P S L  +++         +  R   PE   EIM  +
Sbjct:  100 EDINSLCLTVVQRLMERTKLPWDAVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSYWDGRYALVVCGDIAVYPSGNARPTGGAGAVAMLIGPKAPLVLEQGLRGTHMENAYDFYKPNLASEYPLVDGKLSIQCYLRALDRCYAAYRKKIQNQWKQAGNNQPFTLDDVQYMIFHTPFCKMVQKSLARLMFNDFLSSSSDKQNNLYKGLEAFRGLKLEETYTNKDVDKALLKASLDMFNQKTKASLYLSTNNGNMYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASFFSFRVSKDASPGSPLEKLVSSVSDLPKRLDSRRRMSPEEFTEIMNQR 467          
BLAST of DY258057 vs. ExPASy Swiss-Prot
Match: HMCS1_RAT (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Rattus norvegicus GN=Hmgcs1 PE=1 SV=1)

HSP 1 Score: 345.51 bits (885), Expect = 3.799e-94
Identity = 178/341 (52.20%), Postives = 239/341 (70.09%), Query Frame = 2
Query:    2 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCY----KCLCSKYEKLEG--KQFSLSNADYFMFHSPYNKLVQKSFARSLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALGS-LIHNKHSELDGQRVVFVSYGSGLTATMFSLKLSEGHHPLSLSNILT 1003
            ED+ S+ LT V  L+E+  +    IGRLEVG+ET+IDKSKS+K+ LMQ+FE+ GNTDIEG+D+TNACYGGTAA+FN VNW+ESSSWDGRY LVV  D A+YA G ARPTGG  AV +L+GP+APV F+  LRG+HM HAYDFYKP++ SEYPVVDGKLS  CYL ALD CY    K + ++++K EG  K F+L++  + +FHSPY KLVQKS AR   NDF+ + +    +    L  F  +  +++Y  RD+EK   + +  L++ K + S L+  Q GNMYT+S+Y +L S L      +L G+R+   SYGSGL AT++SLK+++   P S  + +T
Sbjct:   63 EDINSLCLTVVQKLMERNSLSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIAIYASGNARPTGGVGAVALLIGPNAPVIFDRGLRGTHMQHAYDFYKPDMLSEYPVVDGKLSIQCYLSALDRCYSVYRKKIRAQWQK-EGKDKDFTLNDFGFMIFHSPYCKLVQKSLARMFLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVEKAFMKASAELFNQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVFSYGSGLAATLYSLKVTQDATPGSALDKIT 402          
BLAST of DY258057 vs. ExPASy Swiss-Prot
Match: HMCS2_RAT (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus GN=Hmgcs2 PE=2 SV=1)

HSP 1 Score: 343.969 bits (881), Expect = 1.105e-93
Identity = 177/368 (48.10%), Postives = 238/368 (64.67%), Query Frame = 2
Query:    2 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL-----EGKQFSLSNADYFMFHSPYNKLVQKSFARSLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALGSLI-HNKHSELDGQRVVFVSYGSGLTATMFSLKLSEGHHPLS-LSNILTGYEWWQGSENQGRDFPPENLVEIMKPK 1084
            ED+ S+ LT V  L+E+ K+    +GRLEVG+ET+IDKSK++KT LM++F+  GNTDIEG+D+TNACYGGTA+LFN  NW+ESS WDGRY LVVC D AVY  G  RPTGGA AV ML+GP AP+  E  LRG+HM +AYDFYKPNLASEYP+VDGKLS  CYL ALD CY     K +         + F+L +  Y +FH+P+ K+VQKS AR +FNDF+ ++S       + L  F  L  +E+Y ++D++K   + +  +++ K + S  +    GNMYT+SLY  L SL+ H+   EL G R+   SYGSGL A+ FS ++S+   P S L  +++         +  R   PE   EIM  +
Sbjct:  100 EDINSLCLTVVQRLMERTKLPWDAVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSYWDGRYALVVCGDIAVYPSGNPRPTGGAGAVAMLIGPKAPLVLEQGLRGTHMENAYDFYKPNLASEYPLVDGKLSIQCYLRALDRCYAAYRRKIQNQWKQAGNNQPFTLDDVQYMIFHTPFCKMVQKSLARLMFNDFLSSSSDKQNNLYKGLEAFKGLKLEETYTNKDVDKALLKASLDMFNKKTKASLYLSTNNGNMYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASFFSFRVSKDASPGSPLEKLVSSVSDLPKRLDSRRRMSPEEFTEIMNQR 467          
The following BLAST results are available for this feature:
BLAST of DY258057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
HMCS_ARATH5.559e-16277.16Hydroxymethylglutaryl-CoA synthase OS=Arabidopsis ... [more]
HMCSA_DICDI1.947e-9854.35Hydroxymethylglutaryl-CoA synthase A OS=Dictyostel... [more]
HMCS1_PONAB1.068e-9652.94Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS... [more]
HMCS1_HUMAN1.068e-9652.94Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS... [more]
HMCS1_BLAGE1.068e-9655.28Hydroxymethylglutaryl-CoA synthase 1 OS=Blattella ... [more]
HMCS2_HUMAN1.705e-9448.10Hydroxymethylglutaryl-CoA synthase, mitochondrial ... [more]
HMCS1_MOUSE1.705e-9452.49Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS... [more]
HMCS2_MOUSE2.909e-9448.37Hydroxymethylglutaryl-CoA synthase, mitochondrial ... [more]
HMCS1_RAT3.799e-9452.20Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS... [more]
HMCS2_RAT1.105e-9348.10Hydroxymethylglutaryl-CoA synthase, mitochondrial ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2DD01ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258057 ID=DY258057; Name=DY258057; organism=Citrus clementina; type=EST; length=1233bp
GGAAGATGTCATCTCAATGAGCTTGACAGCTGTTACTAACCTCCTAGAGA
AGTATAAGATTGATCCAAAACAAATTGGTCGTCTCGAAGTAGGAAGCGAA
ACTGTGATAGACAAGAGCAAATCCATTAAGACTTTTTTGATGCAAATTTT
TGAGAAATTTGGAAATACTGACATTGAAGGTGTTGACTCGACCAATGCCT
GCTACGGAGGAACTGCTGCATTATTTAACTGTGTGAACTGGGTGGAGAGT
AGTTCATGGGACGGGCGCTATGGGCTCGTTGTGTGTACCGACAGTGCGGT
TTATGCAGAAGGACCAGCAAGACCCACTGGAGGAGCAGCTGCTGTTGTCA
TGTTAGTAGGGCCTGATGCCCCTGTTGCTTTTGAAAGCAAATTAAGGGGG
AGTCATATGTCTCATGCCTATGATTTCTACAAGCCAAACCTTGCTAGTGA
ATATCCGGTTGTTGATGGGAAACTTTCTCAGACATGCTACCTCATGGCTC
TTGATACTTGTTACAAATGTTTATGCAGCAAGTACGAGAAACTGGAGGGA
AAACAATTTTCTCTTTCTAATGCTGATTATTTCATGTTCCATTCTCCATA
TAACAAGCTTGTACAGAAAAGCTTTGCTCGTTCGTTATTCAATGACTTTA
TGAGGAATGCCAGTTCTGTCGACGAGGCTGCCAAAGAAAAGCTGGGACCA
TTTTCAACCTTGTCTGGTGATGAAAGCTACCAAAGCCGGGATCTTGAGAA
GGTTTCCCAACAACTTGCAAAGCCCCTTTATGACGCAAAGGTCCAACCAT
CCACTTTAATACCGAAGCAAGTTGGTAACATGTACACAGCATCTCTGTAT
GCAGCATTGGGCTCCCTTATTCACAACAAACACAGTGAATTGGATGGGCA
GCGAGTGGTTTTTGTCTCGTATGGGAGTGGTTTGACTGCAACGATGTTCT
CATTGAAACTCAGTGAAGGTCATCATCCCCTCAGCTTGTCAAACATCCTA
ACCGGTTATGAATGGTGGCAGGGAAGTGAAAATCAGGGCAGGGATTTCCC
CCCAGAGAATTTGGTGGAAATCATGAAGCCTAAGGGAACCTAAATTTGGG
AGCCCAAAAACTTTTGAAAACAAGCAAAAAAAAAGAAACCCTTTTTGGGC
CCCCGGAAAACATAACTTATCCCCCCCTGAAAATTTTGTAACTCCCCGGT
GTGCCCGGGGAAAAAATCTTCTTTTCCCCCAAA
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