DY258072
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258072 vs. ExPASy Swiss-Prot
Match: VRN1_ARATH (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana GN=VRN1 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.483e-21 Identity = 83/285 (29.12%), Postives = 127/285 (44.56%), Query Frame = 1 Query: 175 PFRFFRVILPSILEQKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVKDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDY---------PYHRGQPNKEEQNSIHDDEMQCENSTKKLGFRASCKNQMHHSQGSLHYKRLLNG---TAGNFSRPSSAVQDDHQTEFVDGQALSALLEEMGISISRSCLSLEAEERHRVIT---------AARLFEPRNPSFMVIVRGNE-RRKAYLFIPIKFVNNYLCEVPKFIKVQA*RKR 963 PF F ++I S +++K+L++P FV +F +ELS L P+G VW+VG+ K KIW DGW FV +SI + Y L+F+Y NS F V IF+++ EI+Y H + E D E+ +S S + S + L G P + + + D + +++ +RS A R R +T AA+ FEP NP F V++R + R +++P F YL + FIKVQ K+ Sbjct: 4 PF-FHKLIFSSTIQEKRLRVPDKFVSKFK-DELSVAVALTVPDGHVWRVGLRKADNKIWFQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRARLFEDLEDEDAEVIFPSSVYPSPLPESTV-PANKGYASSAIQTLFTGPVKAEEPTPTPKIPKKRGRKKKNADPEEINSSAPRDDDPENRSKFYESASARKRTVTAEERERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAEKQ 285
BLAST of DY258072 vs. ExPASy Swiss-Prot
Match: Y3896_ARATH (B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana GN=At3g18960 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.876e-16 Identity = 50/154 (32.47%), Postives = 85/154 (55.19%), Query Frame = 1 Query: 181 RFFRVILPSILEQKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVKDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYPYHRGQPNKEEQNSIH----DDEMQCENSTKKLGFRASCKNQMHHSQGSLHYK 630 +FF+++LPS ++ K +KIP FV G +LS TL+TP G + + + +IW +GW F + HSI +FL+F+Y +NS+F V+IF+++ACE YP +++H DD++ + +G + + KN + G +K Sbjct: 29 KFFKLVLPSTMKDKMMKIPPRFVKLQG-SKLSEVVTLETPAGFKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYPL----------DAVHIIDSDDDIIDITGKEFVGTQGTRKNNQSVNGGDTEHK 171
BLAST of DY258072 vs. ExPASy Swiss-Prot
Match: Y4158_ARATH (B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana GN=At4g01580 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 4.179e-16 Identity = 42/102 (41.18%), Postives = 65/102 (63.73%), Query Frame = 1 Query: 181 RFFRVILPSILEQKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVKDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYP 486 +FF+++LPS ++ K ++IP FV G +LS TL TP G + + + +IW +GW F + HSI +FL+F+Y KNS+F V+IF+ +ACE +YP Sbjct: 29 KFFKLVLPSTMKDKMMRIPPRFVKLQG-SKLSEVVTLVTPAGYKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYP 129
BLAST of DY258072 vs. ExPASy Swiss-Prot
Match: Y1475_ARATH (B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana GN=At1g49475 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 2.074e-15 Identity = 45/122 (36.89%), Postives = 73/122 (59.84%), Query Frame = 1 Query: 181 RFFRVILPSILEQKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVKDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYPYHRGQPNKEEQNSIHDDEMQ 546 +F ++IL S + +K +K+P FV RFG +L+ + TL+TP G + + + ++W + GW F + HS+ +FL F Y +S F V+IFD++A EI+YP N+EE + DD+ Q Sbjct: 33 KFIKIILLSRIIEKMMKVPARFV-RFG-PKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKGWSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPLDDTDDNREE---VMDDDEQ 149
BLAST of DY258072 vs. ExPASy Swiss-Prot
Match: Y3123_ORYSJ (B3 domain-containing protein Os03g0212300 OS=Oryza sativa subsp. japonica GN=Os03g0212300 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 9.017e-11 Identity = 44/118 (37.29%), Postives = 57/118 (48.31%), Query Frame = 1 Query: 148 KMAGNRATEPFRFFRVILPSILEQKKLKIPKAFVGRFGYEELSSDATLKTPNGC-VWQVGVTKD--KGKIWLDDGWHHFVKDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYPYH 492 +MA R T+ F FFR+ILP + KLK+P F G EL G W V V D G ++L GW F + H + +FLVF+Y + F V +FD T C DY H Sbjct: 4 QMANLRLTD-FEFFRIILPGS-SKTKLKLPYKFARELGDRELREARLRVAGEGRRPWDVKVFDDDVSGDVYLGRGWQEFARAHDLRDGHFLVFRYDGAAAFTVTVFDETMCRRDYRRH 119 The following BLAST results are available for this feature:
BLAST of DY258072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258072 ID=DY258072; Name=DY258072; organism=Citrus clementina; type=EST; length=1243bpback to top |