DY258074

Overview
NameDY258074
Unique NameDY258074
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1304
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9924 contig Ccv1_Contig9924:5..1308. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DY258074 vs. ExPASy Swiss-Prot
Match: ULP1_YEAST (Ubiquitin-like-specific protease 1 OS=Saccharomyces cerevisiae GN=ULP1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 4.323e-11
Identity = 47/172 (27.33%), Postives = 84/172 (48.84%), Query Frame = 1 
Query:   85 ITRSSMRSLLPRAWIDGDIITMYAEYKTIEEAQKDITSPRCWFLPSYYSQVVLGDSGDLNPYRRASRFQERYMPQLETCEKIYVPIHC-EAHWYMLVIDILRQTADIWDSLESLSQREKMINQSLTILASLDFLLLGEARLRFGSNFNFLHFQLGRQTGLPQQPNDFDCGYY 597
            IT    ++L PR W++  II  + +Y  IE++  +  +   +F  +      L + G    Y+   R+ +R   Q++  +KI+ PI+  ++HW + +ID+ ++T    DSL +          S  IL  L   ++ E++   G +F+ +H         PQQPN +DCG Y
Sbjct:  435 ITVRDFKTLAPRRWLNDTIIEFFMKY--IEKSTPNTVAFNSFFYTN------LSERG----YQGVRRWMKRKKTQIDKLDKIFTPINLNQSHWALGIIDLKKKTIGYVDSLSNGPNA-----MSFAILTDLQKYVMEESKHTIGEDFDLIHLDC------PQQPNGYDCGIY 583
The following BLAST results are available for this feature:
BLAST of DY258074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ULP1_YEAST4.323e-1127.33Ubiquitin-like-specific protease 1 OS=Saccharomyce... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAB2DF02ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258074 ID=DY258074; Name=DY258074; organism=Citrus clementina; type=EST; length=1304bp
GAGGATGAAAAAAAGCTTATTCTTTACCTTTTTGACGACAAGTTGGCTGA
AATGGATGTTGTCGTCCGTACAGAATACAGCAGCATAACACGGAGCAGTA
TGCGTTCCCTCCTGCCGAGAGCATGGATTGATGGTGATATTATTACTATG
TACGCAGAGTACAAGACTATCGAAGAGGCCCAAAAGGATATCACCTCTCC
TCGATGTTGGTTCTTGCCGTCATATTATTCCCAAGTTGTATTGGGTGACT
CGGGTGATCTAAACCCCTATCGTCGAGCTTCTAGGTTCCAAGAGCGCTAC
ATGCCCCAGCTGGAAACCTGTGAAAAGATTTATGTGCCCATACATTGTGA
AGCTCATTGGTACATGCTTGTTATTGACATTCTTCGTCAAACTGCTGATA
TTTGGGATTCATTGGAATCTCTCAGTCAAAGGGAAAAAATGATTAATCAG
TCATTGACAATTCTCGCCTCACTGGATTTTTTGCTACTTGGAGAGGCTCG
ACTTCGTTTTGGTTCAAATTTCAATTTTCTGCATTTTCAACTTGGTCGTC
AAACTGGTCTGCCACAACAGCCAAATGATTTTGATTGTGGATACTATACC
TTGAAATATATGGACAATCCCTCTATTGTTGCTGACCAGTCTTATCAGCA
CGATTCGGATTATGCTCGCATCCTGTTGGCACTCTATCTAGCACAATCTC
CACTTAATCATATTANGCATAAACTCATGCAAGATGCTTCCAATGGATAT
GGAAAGTGTAGTGCTGCTGACTCGCAAGGGCCCCTTGTAAACACCCTCAG
AATTAAGAAAGCTGCCCGAAATATTATCTTAACAGACCCCGTCCGAGGCT
TTATAAAAAACTTACTATGATCGCTAAGGTGTCCCTACCTTTGGAATGGA
ACTTTAATTTTTGGGTATCGAAAACCTTTTGTTTTTTAATATTTTTGGAA
CCCTTTTTTTGGAAACATAAAAAAATCATTTTTTGGGTTAGGAAACCCAA
TAACGGTTTTTTAAAACCTTTTGCCGTTTATTTTCCCCAAAAAAACCTCA
AAACAAAAGGACCCCTGGGTGGGTTTTAAAAAAAGGGGTTTTAAAAGGGG
TTTTTGGCGTAAGGAGGGCCCCCCTTTTTTTTTTTTTTTTGGAGAGGGGG
AGGTTTTTTATTTGGGTTGTGATATTTTTCCACACCTTTTTTTTTTTTTA
TGGCACCATCCCTCCCCCCAAAAAAAAAGGAGGGAATAAATTTTAAAAAA
AAAAAATATAGATAGAAAAATTATTTTTTTGGGGGGGGGGGGGATTACAT
TCTT
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