DY258075

Overview
NameDY258075
Unique NameDY258075
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: GYAR_PYRFU (Glyoxylate reductase OS=Pyrococcus furiosus GN=gyaR PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.522e-32
Identity = 75/161 (46.58%), Postives = 103/161 (63.98%), Query Frame = 1
Query:   37 GKTVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKY---YPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEELFGL*NVVLMPHVGSGTVETRKTMADLVLGNLEA 510
            GKT+GI+G GRIG A+A+RA+ F   I YYS T K   + +    Y  + E+      +++A P T+ET  +IN E +  + P  +L+N+ RG  V+ + L+ AL EG ++GAGLDVFE EP+  EELF L NVVL PH+GS T E R+ MA+LV  NL A
Sbjct:  150 GKTIGIVGFGRIGQAIARRAKGFNMRILYYSRTRKSQAEKELGAEYRPLEEVLKESDFVILAVPLTKETMYMINEERLKLMKPTAILVNIARGKVVDTKALIKALKEGWIAGAGLDVFEEEPYYNEELFSLDNVVLTPHIGSATFEAREAMAELVARNLIA 310          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: GYAR_THEGJ (Glyoxylate reductase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=gyaR PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.868e-32
Identity = 78/162 (48.15%), Postives = 102/162 (62.96%), Query Frame = 1
Query:   37 GKTVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPS----LKYKYYPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEELFGL*NVVLMPHVGSGTVETRKTMADLVLGNLEA 510
            GKT+GIIG GRIG AVA+RA+ F   I YYS T KP     LK ++ P + EL      +V+A P T+ET  +I    +  + P  +L+N+ RG  V+   L+ AL EG ++GAGLDVFE EP+  EELF L NV+L PH+GS T   R+ MA+LV  NL A
Sbjct:  150 GKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPEAEEELKAEFKP-LEELLKESDFVVLAVPLTKETYHMIGERELKLMKPTAILVNIARGKVVDTEALIKALKEGWIAGAGLDVFEEEPYYNEELFSLKNVILAPHIGSATFGAREGMAELVARNLIA 310          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: GYAR_PYRAB (Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.396e-31
Identity = 76/161 (47.20%), Postives = 100/161 (62.11%), Query Frame = 1
Query:   37 GKTVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKY---YPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEELFGL*NVVLMPHVGSGTVETRKTMADLVLGNLEA 510
            GKT+GIIG GRIG A+AKRA  F   I YYS T KP ++ +    +  + EL      +V+A P  +ET  +IN E +  +    +LINV RG  ++ + L+ AL EG ++GAGLDV+E EP+  EELF L NVVL PH+GS T   R+ MA LV  NL A
Sbjct:  151 GKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIA 311          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: GYAR_PYRKO (Glyoxylate reductase OS=Pyrococcus kodakaraensis GN=gyaR PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.354e-31
Identity = 74/161 (45.96%), Postives = 103/161 (63.98%), Query Frame = 1
Query:   37 GKTVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKY---YPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEELFGL*NVVLMPHVGSGTVETRKTMADLVLGNLEA 510
            GKT+GI+G GRIG AVA+RA  F   I YYS + KP  + +    + S+ +L      +V+A P T+ET+ +IN E +  +    +L+N+ RG  V+ + L+ AL EG ++GAGLDV+E EP+  EELF L NVVL PH+GS T   R+ MA+LV  NL A
Sbjct:  150 GKTIGIVGFGRIGQAVARRARGFGMRILYYSRSRKPEAEKELGAEFRSLEDLLRESDFVVLAVPLTKETQYMINEERLRLMKKTAILVNIARGKVVDTKALMKALKEGWIAGAGLDVYEEEPYYNEELFSLKNVVLAPHIGSATYGAREGMAELVARNLIA 310          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: GYAR_PYRHO (Glyoxylate reductase OS=Pyrococcus horikoshii GN=gyaR PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.425e-30
Identity = 76/161 (47.20%), Postives = 101/161 (62.73%), Query Frame = 1
Query:   37 GKTVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKY---YPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEELFGL*NVVLMPHVGSGTVETRKTMADLVLGNLEA 510
            GKT+GIIGLGRIG A+AKRA+ F   I YYS T K  ++ +    +  + +L      +V+A P T ET  +IN E +  +    +LIN+ RG  V+   L+ AL EG ++GAGLDVFE EP+  EELF L NVVL PH+GS +   R+ MA+LV  NL A
Sbjct:  150 GKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEPYYNEELFKLDNVVLTPHIGSASFGAREGMAELVAKNLIA 310          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: GYAR_THEON (Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.431e-30
Identity = 73/161 (45.34%), Postives = 101/161 (62.73%), Query Frame = 1
Query:   37 GKTVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKY---YPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEELFGL*NVVLMPHVGSGTVETRKTMADLVLGNLEA 510
            G+T+GI+G GRIG A+A+RA+ F   I Y S T KP ++ +    +  + EL      +V+  P T+ET  +IN E +  + P  +L+N+ RG  V+   L+ AL EG ++GAGLDVFE EP+  EELF L NVVL PH+GS T   R+ MA+LV  NL A
Sbjct:  150 GRTIGIVGFGRIGQAIARRAKGFGMRILYNSRTRKPEVEKELGAEFMPLDELLKESDFVVLVVPLTKETYHMINEERLKLMKPTAILVNIARGKVVDTEALVKALREGWIAGAGLDVFEEEPYYHEELFSLDNVVLAPHIGSATYGAREGMAELVARNLIA 310          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: GYAR_THELI (Glyoxylate reductase OS=Thermococcus litoralis GN=gyaR PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.146e-30
Identity = 79/178 (44.38%), Postives = 104/178 (58.43%), Query Frame = 1
Query:   37 GKTVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKY---YPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEELFGL*NVVLMPHVGSGTVETRKTMADLVLGNLEA--------HFLNKPLLT 537
            GKT+GI+G GRIG A+AKRA+ F   I YYS T KP  + +    Y     L      + +  P T+ET  +I  + +  + P  +LIN  RG  V+   L+ AL EG ++GAGLDVFE EP+  EELF L NVVL PH+GS T E R+ MA+LV  NL A        + +NK +LT
Sbjct:  150 GKTLGIVGFGRIGQALAKRAKGFGMKIIYYSRTRKPEAEEEIGAEYVDFETLLKESDFISLHVPLTKETYHMIGEKELKLMKPNAILINTSRGAVVDTNALIKALKEGWIAGAGLDVFEEEPYYNEELFKLKNVVLAPHIGSATHEAREGMAELVAKNLIAFAKGEIPPNLVNKDVLT 327          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: GHRB_YERPY (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=ghrB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.016e-25
Identity = 68/160 (42.50%), Postives = 96/160 (60.00%), Query Frame = 1
Query:   40 KTVGIIGLGRIGMAVAKRAE-AFICPINYYSIT*KPSLKYKY---YPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEP-HVPEELFGL*NVVLMPHVGSGTVETRKTMADLVLGNL 504
            KT+GI+G+GRIGMA+A+RA   F  P+ Y S     + + ++   + S+  L +    L +  P TE+T  +I RE +  +    +LIN GRGP V+E+ L++AL +G +  AGLDVFE EP  V   L  L NVV +PH+GS T ETR  MA   + NL
Sbjct:  146 KTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKIKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSATHETRYNMAACAVDNL 305          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: GHRB_YERPS (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis GN=ghrB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.016e-25
Identity = 68/160 (42.50%), Postives = 96/160 (60.00%), Query Frame = 1
Query:   40 KTVGIIGLGRIGMAVAKRAE-AFICPINYYSIT*KPSLKYKY---YPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEP-HVPEELFGL*NVVLMPHVGSGTVETRKTMADLVLGNL 504
            KT+GI+G+GRIGMA+A+RA   F  P+ Y S     + + ++   + S+  L +    L +  P TE+T  +I RE +  +    +LIN GRGP V+E+ L++AL +G +  AGLDVFE EP  V   L  L NVV +PH+GS T ETR  MA   + NL
Sbjct:  146 KTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSATHETRYNMAACAVDNL 305          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: GHRB_YERPP (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis (strain Pestoides F) GN=ghrB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.016e-25
Identity = 68/160 (42.50%), Postives = 96/160 (60.00%), Query Frame = 1
Query:   40 KTVGIIGLGRIGMAVAKRAE-AFICPINYYSIT*KPSLKYKY---YPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEP-HVPEELFGL*NVVLMPHVGSGTVETRKTMADLVLGNL 504
            KT+GI+G+GRIGMA+A+RA   F  P+ Y S     + + ++   + S+  L +    L +  P TE+T  +I RE +  +    +LIN GRGP V+E+ L++AL +G +  AGLDVFE EP  V   L  L NVV +PH+GS T ETR  MA   + NL
Sbjct:  146 KTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSATHETRYNMAACAVDNL 305          
The following BLAST results are available for this feature:
BLAST of DY258075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
GYAR_PYRFU1.522e-3246.58Glyoxylate reductase OS=Pyrococcus furiosus GN=gya... [more]
GYAR_THEGJ9.868e-3248.15Glyoxylate reductase OS=Thermococcus gammatolerans... [more]
GYAR_PYRAB6.396e-3147.20Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR ... [more]
GYAR_PYRKO8.354e-3145.96Glyoxylate reductase OS=Pyrococcus kodakaraensis G... [more]
GYAR_PYRHO1.425e-3047.20Glyoxylate reductase OS=Pyrococcus horikoshii GN=g... [more]
GYAR_THEON2.431e-3045.34Glyoxylate reductase OS=Thermococcus onnurineus (s... [more]
GYAR_THELI4.146e-3044.38Glyoxylate reductase OS=Thermococcus litoralis GN=... [more]
GHRB_YERPY4.016e-2542.50Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]
GHRB_YERPS4.016e-2542.50Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]
GHRB_YERPP4.016e-2542.50Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2DF03ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258075 ID=DY258075; Name=DY258075; organism=Citrus clementina; type=EST; length=754bp
AGGAAGGGGGATTATAAGCTGACCGCTAGGTTCACTGGAAAAACAGTTGG
CATTATTGGGCTAGGAAGAATTGGCATGGCAGTTGCTAAGAGAGCTGAAG
CATTTATCTGCCCAATCAACTACTACTCTATAACATAGAAACCAAGTTTG
AAATACAAATACTACCCGAGTGTATTTGAGTTGGCCTCGAACTGTCACAT
TCTGGTCGTTGCATGCCCACAAACGGAAGAGACCCGCCGTATCATTAATC
GGGAAGTCATTGATGCTTTGGGACCAAAAGGGGTTCTCATCAACGTTGGG
AGGGGTCCTCGCGTGGAGGAACGTGAACTGTTGTCGGCACTGGTTGAAGG
CCGTTTAAGCGGAGCTGGGCTCGATGTGTTTGAAAATGAGCCTCATGTAC
CTGAGGAGCTCTTTGGTCTATAAAATGTGGTCCTTATGCCCCATGTAGGA
AGTGGCACAGTGGAAACCCGCAAAACCATGGCTGACCTTGTACTTGGGAA
TTTGGAAGCTCATTTTCTGAACAAACCGCTGCTTACTCCAGTAGTTTGAT
TGTTTCATGAAAGATGCAAGTTTAAGACCGATTGACGGCTCCATCCTGCT
GCTGCTACTTAAGTATGTTTTATCTAAAGAACATTGTTTTAAGGCCCTGG
TACAATTTGTCCCGAAGCCTTAGCCAATTACTTTAAGATCTTCAGCAACA
TGTTTTAATTAAATTCTTAAATTGCAGCAGTTGCATATGATGTTGATTTG
ACAT
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