DY258104
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258104 vs. ExPASy Swiss-Prot
Match: MCCB_HUMAN (Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Homo sapiens GN=MCCC2 PE=1 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.578e-71 Identity = 77/113 (68.14%), Postives = 91/113 (80.53%), Query Frame = 1 Query: 346 PRESIDRLTDPGSSSLELSQLAGHELYE-VTLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIF 681 PRE ID L DPGS LELSQ AG++LY+ + GGIITGIG V G CM +AND TVKGG Y+P+T+KK LRAQEIA Q +LPCIYLVDSGGAYLP+QA+VFPD+++FGR F Sbjct: 83 PRERIDNLIDPGSPFLELSQFAGYQLYDNEEVPGGGIITGIGRVSGVECMIIANDATVKGGAYYPVTVKKQLRAQEIAMQNRLPCIYLVDSGGAYLPRQADVFPDRDHFGRTF 195 HSP 2 Score: 132.88 bits (333), Expect = 2.578e-71 Identity = 65/109 (59.63%), Postives = 83/109 (76.15%), Query Frame = 2 Query: 659 RKILGEFFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQNELHGLSLGKTLSRTCTW 985 R G FYNQAIMS++ I QIA+V+GSCTAGGAY+PAMADE+++V+ GTIFLAGPPLVKAATGEE LGGA +HC+ SGVSD++A ++ H L L + + R + Sbjct: 188 RDHFGRTFYNQAIMSSKNIAQIAVVMGSCTAGGAYVPAMADENIIVRKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCRKSGVSDHWALDDHHALHLTRKVVRNLNY 296
BLAST of DY258104 vs. ExPASy Swiss-Prot
Match: MCCB_ARATH (Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Arabidopsis thaliana GN=MCCB PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 1.129e-57 Identity = 132/265 (49.81%), Postives = 154/265 (58.11%), Query Frame = 1 Query: 346 PRESIDRLTDPGSSSLELSQLAGHELYEVTLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFL*SSHNVS*RHPSNCISTGFLHCWRCLYSCNG**KCYGKRKWYHFSGRTPPCKGCYRRGISAEDFGGCC--CAL*DIRGFRLFCSK*IAWTFSWKDIIKNLHMAGRTGEINGFQNINPEY*NLYMT*RSLILLPPQTSTSPFNFQSLLPPFFD 1134 PRE IDRL DPGSS LELSQLAGHELYE L SGGIITGIGP+HGR+CMF+ANDPTVKGGTY+PITIKKHLRAQEIAA+C+LPCIYLVDSGGAYLPKQAEVFPDKENFGR+F S S P I G K F P K +SAED GG C + + + F + ++I+KNLHMA + G F + N Y L + P F+ +S++ D Sbjct: 102 PRERIDRLLDPGSSFLELSQLAGHELYEEPLPSGGIITGIGPIHGRICMFMANDPTVKGGTYYPITIKKHLRAQEIAARCRLPCIYLVDSGGAYLPKQAEVFPDKENFGRVFYNESVMSSDGIPQIAIVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGATVHCTVSGVSDY--FAQDELHGLAIGRNIVKNLHMAAKQGMEGTFGSKNLVYKEPLYDINELRSIAPVDHKQQFDVRSIIARIVD 364
BLAST of DY258104 vs. ExPASy Swiss-Prot
Match: MCCB_RAT (Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus GN=Mccc2 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 7.606e-38 Identity = 77/113 (68.14%), Postives = 92/113 (81.42%), Query Frame = 1 Query: 346 PRESIDRLTDPGSSSLELSQLAGHELY-EVTLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIF 681 PR+ ID L DPGS LE SQ AG++LY E + +GGIITGIG V G CM VAND TVKGGTY+P+T+KKH+RAQEIA Q +LPCIYLVDSGGA LP+QA+ FPD+++FGRIF Sbjct: 83 PRDRIDNLIDPGSPFLEFSQFAGYKLYGEEEVPAGGIITGIGRVSGVECMIVANDATVKGGTYYPVTVKKHVRAQEIALQNRLPCIYLVDSGGANLPRQADTFPDRDHFGRIF 195 HSP 2 Score: 134.035 bits (336), Expect = 2.006e-30 Identity = 67/120 (55.83%), Postives = 88/120 (73.33%), Query Frame = 2 Query: 626 TFPSRLKYSLTRKILGEFFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQNELHGLSLGKTLSRTCTW 985 TFP R + G FYNQAIMS++ I QIA+V+GSCTAGGAY+PAMADE+++V+ GTIFLAGPPLVKAATGEE LGGA +HC+ SGV+D++A ++ H L L + + R+ + Sbjct: 184 TFPDRDHF-------GRIFYNQAIMSSKNITQIAVVMGSCTAGGAYVPAMADENIIVQRQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCRRSGVTDHYALDDHHALHLTRKVVRSLNY 296
BLAST of DY258104 vs. ExPASy Swiss-Prot
Match: MCCB_MOUSE (Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Mus musculus GN=Mccc2 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 1.297e-37 Identity = 76/113 (67.26%), Postives = 92/113 (81.42%), Query Frame = 1 Query: 346 PRESIDRLTDPGSSSLELSQLAGHELY-EVTLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIF 681 PR+ ID L DPGS LE SQ AG++LY + + +GGIITGIG V G CM VAND TVKGGTY+P+T+KKH+RAQEIA Q +LPCIYLVDSGGA LP+QA+ FPD+++FGRIF Sbjct: 83 PRDRIDNLIDPGSPFLEFSQFAGYQLYGDEEVPAGGIITGIGRVSGVECMIVANDATVKGGTYYPVTVKKHVRAQEIALQNRLPCIYLVDSGGANLPRQADTFPDRDHFGRIF 195 HSP 2 Score: 134.035 bits (336), Expect = 2.006e-30 Identity = 67/120 (55.83%), Postives = 88/120 (73.33%), Query Frame = 2 Query: 626 TFPSRLKYSLTRKILGEFFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQNELHGLSLGKTLSRTCTW 985 TFP R + G FYNQAIMS++ I QIA+V+GSCTAGGAY+PAMADE+++V+ GTIFLAGPPLVKAATGEE LGGA +HC+ SGV+D++A ++ H L L + + R+ + Sbjct: 184 TFPDRDHF-------GRIFYNQAIMSSKNITQIAVVMGSCTAGGAYVPAMADENIIVQKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCRKSGVTDHYALDDHHALHLTRKVVRSLNY 296
BLAST of DY258104 vs. ExPASy Swiss-Prot
Match: MCCB_DROME (Probable methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Drosophila melanogaster GN=L(2)04524 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 1.695e-37 Identity = 90/179 (50.28%), Postives = 110/179 (61.45%), Query Frame = 1 Query: 349 RESIDRLTDPGSSSLELSQLAGHELY-EVTLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFL*SSHNVS*RHPSNCISTGFLHCWRCLYSCNG**KCYGKRKWYHFSGRTPPCKGCYRRGISAEDFGG 882 RE I+ L D GS LELS LAGHELY E + SGGI+TG+G V G C+ VAND TVKGG+Y+PIT+KKHLRAQEIA + +LPCIYLVDSGGA LP+QA+VFPDK +FGRIF ++ + P + G K++ F P K +SAED GG Sbjct: 83 RERINLLLDKGSPFLELSALAGHELYGEEVVNSGGIVTGVGRVCGTECLVVANDATVKGGSYYPITVKKHLRAQEIAQENRLPCIYLVDSGGANLPRQADVFPDKLHFGRIFYNQANMSAQGIPQIAVVMGSCTAGGAYVPAMADESIIVKKQGTIFLAGPPLVKAATGEEVSAEDLGG 261 HSP 2 Score: 143.28 bits (360), Expect = 2.759e-35 Identity = 71/113 (62.83%), Postives = 87/113 (76.99%), Query Frame = 2 Query: 629 FPSRLKYSLTRKILGEFFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQNELHGLSLGKTL 967 FP +L + G FYNQA MSA+GIPQIA+V+GSCTAGGAY+PAMADES++VK GTIFLAGPPLVKAATGEE LGGA +HCKTSGV+D++A ++ H L L + + Sbjct: 184 FPDKLHF-------GRIFYNQANMSAQGIPQIAVVMGSCTAGGAYVPAMADESIIVKKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCKTSGVTDHYALDDEHALYLARQI 289 HSP 3 Score: 28.1054 bits (61), Expect = 2.759e-35 Identity = 19/47 (40.43%), Postives = 25/47 (53.19%), Query Frame = 3 Query: 1032 VLKPLYDLKEPYSIAPPDLHQSF*FPIIIASLF*LEVNFDELKKLNG 1172 V +P YD +E Y I P+L +SF +IA + F E KKL G Sbjct: 322 VEEPRYDAEELYGIVGPNLTKSFDVREVIARIV-DGSRFTEFKKLYG 367
BLAST of DY258104 vs. ExPASy Swiss-Prot
Match: MCCB_CAEEL (Probable methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Caenorhabditis elegans GN=F02A9.4 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 8.410e-37 Identity = 88/179 (49.16%), Postives = 109/179 (60.89%), Query Frame = 1 Query: 349 RESIDRLTDPGSSSLELSQLAGHELY-EVTLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFL*SSHNVS*RHPSNCISTGFLHCWRCLYSCNG**KCYGKRKWYHFSGRTPPCKGCYRRGISAEDFGG 882 RE ID + D GS +E SQLAG+E+Y + + SGGI+TG+G V GR+C+ VAND TVKGGTY+PIT+KKHLRAQEIA + KLPCIYLVDSGGA LP+QA++F D ++FGRIF + S P + G K F G P K ISAE+ GG Sbjct: 129 RERIDGIVDAGSPFIEFSQLAGYEMYGKEEVPSGGILTGVGIVSGRVCVIVANDATVKGGTYYPITVKKHLRAQEIARENKLPCIYLVDSGGANLPRQADIFADSQHFGRIFYNQATMSSEGIPQLAVVMGSCTAGGAYVPAMSDQAIIVKGTGTVFLGGPPLVKAATGEEISAEELGG 307 HSP 2 Score: 139.813 bits (351), Expect = 3.656e-32 Identity = 63/98 (64.29%), Postives = 80/98 (81.63%), Query Frame = 2 Query: 671 GEFFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQNELHGLSLGKT 964 G FYNQA MS+EGIPQ+A+V+GSCTAGGAY+PAM+D++++VKG GT+FL GPPLVKAATGEE LGGA +HC SGV+DY+A N+ H L L ++ Sbjct: 237 GRIFYNQATMSSEGIPQLAVVMGSCTAGGAYVPAMSDQAIIVKGTGTVFLGGPPLVKAATGEEISAEELGGADLHCGESGVTDYYAHNDKHALYLARS 334
BLAST of DY258104 vs. ExPASy Swiss-Prot
Match: MCCB_DICDI (Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Dictyostelium discoideum GN=mccb PE=3 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 2.447e-36 Identity = 79/131 (60.31%), Postives = 97/131 (74.05%), Query Frame = 1 Query: 349 RESIDRLTDPGSSSLELSQLAGHELY-EVTLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFL*SSHNVS*RHPSNCISTG 738 RE I+ L D GS LE SQLAG +Y + + +GGIITGIG +HG C+ VAND TVKGGTYFPIT+KKHLRAQEIA + LPCIYLVDSGGA LP+QA+VFPD+++FGRIF ++ + R P + G Sbjct: 107 RERIEALIDVGSPFLEFSQLAGWGMYGKEEVAAGGIITGIGKIHGVECVIVANDSTVKGGTYFPITVKKHLRAQEIAQENNLPCIYLVDSGGANLPRQADVFPDRDHFGRIFFNQANMSAKRIPQIAVVMG 237 HSP 2 Score: 133.265 bits (334), Expect = 4.502e-32 Identity = 63/103 (61.17%), Postives = 82/103 (79.61%), Query Frame = 2 Query: 659 RKILGEFFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQNELHGLSLGKTL 967 R G F+NQA MSA+ IPQIA+V+GSCTAGGAY+PAMADESV+VKG GTIFL GPPLVKAATGE LGGA +HC+TSGV+D++A+++ +++ + + Sbjct: 211 RDHFGRIFFNQANMSAKRIPQIAVVMGSCTAGGAYVPAMADESVIVKGTGTIFLGGPPLVKAATGEIVTSEELGGADLHCRTSGVTDHYARDDAEAIAITRRI 313 HSP 3 Score: 27.335 bits (59), Expect = 4.502e-32 Identity = 18/45 (40.00%), Postives = 23/45 (51.11%), Query Frame = 3 Query: 1038 KPLYDLKEPYSIAPPDLHQSF*FPIIIASLF*LEVNFDELKKLNG 1172 +PLY E I P DL ++F +IA L FDE K+L G Sbjct: 332 EPLYPTSELAGIVPSDLKKNFDIRKVIARLV-DGSRFDEFKELYG 375
BLAST of DY258104 vs. ExPASy Swiss-Prot
Match: PCCB_SACEN (Propionyl-CoA carboxylase beta chain OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=pccB PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.447e-19 Identity = 35/85 (41.18%), Postives = 49/85 (57.65%), Query Frame = 2 Query: 713 IPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQNELHGLSLGKTL 967 IPQI+L++G C G Y PA+ D +VMV +F+ GP ++K TGE+ LGGA H + SG + Y A +E +S K L Sbjct: 177 IPQISLIMGPCAGGAVYSPAITDFTVMVDQTSHMFITGPDVIKTVTGEDVSFEDLGGARTHNERSGNAHYLATDEDDAISYVKEL 261 HSP 2 Score: 46.2098 bits (108), Expect = 8.447e-19 Identity = 32/97 (32.99%), Postives = 49/97 (50.52%), Query Frame = 1 Query: 349 RESIDRLTDPGSSSLELSQLAGHELYEVTLQSG-----GIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGA 624 RE ID L D GS +EL + A H + + G++TG G V GR + D TV GG+ + +K ++ ++A + P + + DSGGA Sbjct: 56 RERIDMLLDEGSF-VELDEHARHRSTNFGMDADRPYGDGVVTGWGTVDGRRVCVFSQDFTVFGGSLGEVFGEKIVKVMDLAMKTGCPLVGINDSGGA 151
BLAST of DY258104 vs. ExPASy Swiss-Prot
Match: PCCB_MYCLE (Probable propionyl-CoA carboxylase beta chain 5 OS=Mycobacterium leprae GN=accD5 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 1.516e-17 Identity = 32/85 (37.65%), Postives = 47/85 (55.29%), Query Frame = 2 Query: 683 YNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQNE 937 + I+++ IPQI+L++G+ G Y PA+ D VMV +F+ GP ++K TGE+ LGGA H SG + Y A E Sbjct: 171 FRNNILASGVIPQISLIMGAAAGGHVYSPALTDFVVMVDQTSQMFITGPDVIKTVTGEDVTMEELGGAHTHMAKSGTAHYVASGE 255 HSP 2 Score: 44.669 bits (104), Expect = 1.516e-17 Identity = 34/100 (34.00%), Postives = 48/100 (48.00%), Query Frame = 1 Query: 340 FSPRESIDRLTDPGSSSLELSQLAGHE-----LYEVTLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGA 624 F+ RE I L D S +EL LA H L E G++TG G + GR + D TV GG+ + +K ++ QE+A + P I + D GA Sbjct: 57 FTARERIYALLDD-DSFVELDALARHRSTNFGLGENRPVGDGVVTGYGTIDGRDVCIFSQDVTVFGGSLGEVYGEKIVKVQELAIKTGRPLIGINDGAGA 155
BLAST of DY258104 vs. ExPASy Swiss-Prot
Match: PCCB_PIG (Propionyl-CoA carboxylase beta chain, mitochondrial OS=Sus scrofa GN=PCCB PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.972e-17 Identity = 35/85 (41.18%), Postives = 50/85 (58.82%), Query Frame = 2 Query: 698 MSAEG-IPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQNELHGL 949 +SA G IPQI+L++G C G Y PA+ D + MVK +F+ GP +VK+ T E+ + LGGA H SGV+ N++ L Sbjct: 184 VSASGVIPQISLIMGPCAGGAVYSPALTDFTFMVKDTSYLFITGPDVVKSVTNEDVTQEELGGARTHTTMSGVAHRAFDNDVDAL 268 HSP 2 Score: 41.5874 bits (96), Expect = 1.972e-17 Identity = 32/106 (30.19%), Postives = 47/106 (44.34%), Query Frame = 1 Query: 349 RESIDRLTDPGSSSLELSQLAGHELYEVTLQSG-------GIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAE 645 RE I L DPGS +E H + + + ++TG G ++GRL + D TV GG+ +K + + A P I L DSGGA + + E Sbjct: 67 RERISLLLDPGSF-IESDMFVEHRCADFGMAADKNKFPGDSVVTGRGRINGRLVYVFSQDFTVFGGSLSGAHAQKICKIMDQAMTVGAPVIGLNDSGGARIQEGVE 171 The following BLAST results are available for this feature:
BLAST of DY258104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258104 ID=DY258104; Name=DY258104; organism=Citrus clementina; type=EST; length=1382bpback to top |