DY258182

Overview
NameDY258182
Unique NameDY258182
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: BADH_HORVU (Betaine aldehyde dehydrogenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 2.313e-62
Identity = 78/103 (75.73%), Postives = 90/103 (87.38%), Query Frame = 2
Query:    2 CAAILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPMVKPVSLELGGKSPIIVFEDV-DLDKAVEW 307
            C A+LKPSELAS+TCLEL  +C E+GLP G+LNI+TGLGP+AGAP+ SHPHVDKIAFTGS ATG  IM AAA MVKPVSLELGGKSP++ F+DV D+DKAVEW
Sbjct:  181 CTAVLKPSELASLTCLELGAICEEIGLPSGVLNIITGLGPDAGAPIASHPHVDKIAFTGSTATGKTIMTAAAQMVKPVSLELGGKSPLVTFDDVADIDKAVEW 283          

HSP 2 Score: 59.3066 bits (142), Expect = 2.313e-62
Identity = 30/62 (48.39%), Postives = 41/62 (66.13%), Query Frame = 1
Query:  421 QNIKISDSLEESCKFGPVVSEGQYEKILKFLSNGKNEGAPFLVXXXXXXXFEKGDFLKKPTL 606
            +NIKISD LEE C+ G V+S+GQYE+I KF+S  ++EGA  L          KG F+ +PT+
Sbjct:  321 KNIKISDPLEEGCRLGSVISKGQYEQIKKFISTARSEGATILHGGDRPKHLGKGFFI-EPTI 381          

HSP 3 Score: 53.9138 bits (128), Expect = 2.313e-62
Identity = 24/40 (60.00%), Postives = 29/40 (72.50%), Query Frame = 3
Query:  294 KRLSGPSFGCFWTNGQICSATSRLLVHESIAANFLKRMVE 413
            K +  P  GCF+  GQ+CSATSRLL+HE IA  FL R+VE
Sbjct:  279 KAVEWPMLGCFFNGGQVCSATSRLLLHEKIAEPFLDRLVE 318          
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: BADH_SPIOL (Betaine aldehyde dehydrogenase, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.361e-48
Identity = 106/203 (52.22%), Postives = 132/203 (65.02%), Query Frame = 2
Query:    2 CAAILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPMVKPVSLELGGKSPIIVFEDVDLDKAVEWTIFWLLLDKWSN-L*CN------ISPSCARKHCSKFFKKDG*RESKTLRFPIPWXXXXXXXXXXXXGSMKKF*NFFQMAKTKGHHFWWGGALRDLLKKGIF 589
            C A+LKPSELASVTCLE  EVC EVGLPPG+LNI+TGLGP+AGAPLVSHP VDKIAFTGS+ATG ++MA+AA +VKPV+LELGGKSPI+VFEDVD+DK VEWTIF      W+N   C+      +  S A +   K  K      +K ++   P+            G   K   F   AK++G    +GG+  + LKKG +
Sbjct:  177 CTAVLKPSELASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMASAAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCF---WTNGQICSATSRLLVHESIAAEFVDKLVK-----WTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRPEHLKKGYY 371          
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: BADH_BETVU (Betaine aldehyde dehydrogenase, chloroplastic OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.750e-47
Identity = 102/203 (50.25%), Postives = 130/203 (64.04%), Query Frame = 2
Query:    2 CAAILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPMVKPVSLELGGKSPIIVFEDVDLDKAVEWTIFWLLLDKWSN-L*CN------ISPSCARKHCSKFFKKDG*RESKTLRFPIPWXXXXXXXXXXXXGSMKKF*NFFQMAKTKGHHFWWGGALRDLLKKGIF 589
            C A+LKPSELAS+TCLE  EVC EVGLPPG+LNIVTGLGP+AGAPL +HP VDK+AFTGS+ATG ++MA+AA +VKPV+LELGGKSPIIVFEDVD+D+ VEWT+F      W+N   C+      +  S A +   +  K      +K ++   P+            G   K   F   AK++G     GG+  + LKKG F
Sbjct:  180 CTAVLKPSELASITCLEFGEVCNEVGLPPGVLNIVTGLGPDAGAPLAAHPDVDKVAFTGSSATGSKVMASAAQLVKPVTLELGGKSPIIVFEDVDIDQVVEWTMFGCF---WTNGQICSATSRLLVHESIAAEFIDRLVK-----WTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILCGGSRPEHLKKGYF 374          

HSP 2 Score: 67.3958 bits (163), Expect = 8.621e-11
Identity = 30/69 (43.48%), Postives = 45/69 (65.22%), Query Frame = 1
Query:  409 LKGIQNIKISDSLEESCKFGPVVSEGQYEKILKFLSNGKNEGAPFLVXXXXXXXFEKGDFLKKPTLQNV 615
            +K  +NIKISD  EE C+ GPV+S+GQY+KI+KF+S  K+EGA  L         +KG F++   + ++
Sbjct:  315 VKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILCGGSRPEHLKKGYFIEPTIISDI 383          
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: BADH1_ARATH (Betaine aldehyde dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=ALDH10A8 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.273e-46
Identity = 104/199 (52.26%), Postives = 129/199 (64.82%), Query Frame = 2
Query:    2 CAAILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPMVKPVSLELGGKSPIIVFEDVDLDKAVEWTIFWLLLDKWSNL*CNISPSCARKH---CSKFFKKDG*RESKTLRFPIPWXXXXXXXXXXXXGSMKKF*NFFQMAKTKGHHFWWGGALRDLLKKGIF 589
            C AILKPSELASVTCLELA++CREVGLPPG+LN++TG G EAGAPL SHP VDKIAFTGS ATG ++M AAA +VKPVS+ELGGKSP+IVF+DVDLDKA EW +F      W+N     + S    H    S+F +K   + SK ++   P             G  +K   F   AK++G     GG+  + L+KG F
Sbjct:  180 CTAILKPSELASVTCLELADICREVGLPPGVLNVLTGFGSEAGAPLASHPGVDKIAFTGSFATGSKVMTAAAQLVKPVSMELGGKSPLIVFDDVDLDKAAEWALFGCF---WTNGQICSATSRLLVHESIASEFIEKLV-KWSKNIKISDPMEEGCRLGPVVSKGQYEKILKFISTAKSEGATILHGGSRPEHLEKGFF 374          

HSP 2 Score: 70.8626 bits (172), Expect = 7.798e-12
Identity = 35/69 (50.72%), Postives = 46/69 (66.67%), Query Frame = 1
Query:  409 LKGIQNIKISDSLEESCKFGPVVSEGQYEKILKFLSNGKNEGAPFLVXXXXXXXFEKGDFLKKPTLQNV 615
            +K  +NIKISD +EE C+ GPVVS+GQYEKILKF+S  K+EGA  L         EKG F++   + +V
Sbjct:  315 VKWSKNIKISDPMEEGCRLGPVVSKGQYEKILKFISTAKSEGATILHGGSRPEHLEKGFFIEPTIITDV 383          
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: BADH2_ARATH (Betaine aldehyde dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=ALDH10A9 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.663e-46
Identity = 102/198 (51.52%), Postives = 126/198 (63.64%), Query Frame = 2
Query:    2 CAAILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPMVKPVSLELGGKSPIIVFEDVDLDKAVEWTIFWLLLDKWSN--L*CNISPSCARKHCSKFFKKDG*RESKTLRFPIPWXXXXXXXXXXXXGSMKKF*NFFQMAKTKGHHFWWGGALRDLLKKGIF 589
            C AILKPSELAS+TCLELA++CREVGLPPG+LNI+TGLG EAGAPL SHPHVDKI FTGS  TG  IM +AA +VKPVSLELGGKSPIIVF+DVD+DKAVEWT+F      W+N  +    S     +  +  F     + +K ++   P+            G  ++   F   A+ +G     GG   + LKKG F
Sbjct:  180 CTAILKPSELASLTCLELADICREVGLPPGVLNILTGLGTEAGAPLASHPHVDKIVFTGSTTTGSSIMTSAAKLVKPVSLELGGKSPIIVFDDVDIDKAVEWTMFGCF---WTNGQICSATSRLLVHERIADEFLDKLVKWTKNIKISDPFEEGCRLGPVVSKGQYERVLKFVSNARNEGATVLCGGVRPEHLKKGYF 374          

HSP 2 Score: 72.0182 bits (175), Expect = 3.500e-12
Identity = 34/69 (49.28%), Postives = 46/69 (66.67%), Query Frame = 1
Query:  409 LKGIQNIKISDSLEESCKFGPVVSEGQYEKILKFLSNGKNEGAPFLVXXXXXXXFEKGDFLKKPTLQNV 615
            +K  +NIKISD  EE C+ GPVVS+GQYE++LKF+SN +NEGA  L         +KG F++   + NV
Sbjct:  315 VKWTKNIKISDPFEEGCRLGPVVSKGQYERVLKFVSNARNEGATVLCGGVRPEHLKKGYFVEPAIVSNV 383          
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: BADH_AMAHP (Betaine aldehyde dehydrogenase, chloroplastic OS=Amaranthus hypochondriacus GN=BADH4 PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.172e-46
Identity = 100/198 (50.51%), Postives = 127/198 (64.14%), Query Frame = 2
Query:    2 CAAILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPMVKPVSLELGGKSPIIVFEDVDLDKAVEWTIFWLLLDKWSN--L*CNISPSCARKHCSKFFKKDG*RESKTLRFPIPWXXXXXXXXXXXXGSMKKF*NFFQMAKTKGHHFWWGGALRDLLKKGIF 589
            C+A+LKPSELASVTCLELAEVCREVGLPPG+LNI+TGLGPEAG PL  HP VDK+AFTGS ATG ++M++AA +VKPV+LELGGKSPI++FEDVDLDKA EWT F      W+N  +    S     +  +  F     +  K ++   P+               +K   F   AK++G     GG+  + LKKG +
Sbjct:  180 CSAVLKPSELASVTCLELAEVCREVGLPPGVLNILTGLGPEAGGPLACHPDVDKVAFTGSTATGSKVMSSAAQLVKPVTLELGGKSPIVIFEDVDLDKAAEWTAFGCF---WTNGQICSATSRLLVHESIAAEFLDRLVKWCKNIKISDPFEEGCRLGPVVSKSQYEKVLKFISTAKSEGATILCGGSRPEHLKKGYY 374          
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: BADH_ATRHO (Betaine aldehyde dehydrogenase, chloroplastic OS=Atriplex hortensis PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.320e-46
Identity = 96/198 (48.48%), Postives = 129/198 (65.15%), Query Frame = 2
Query:    2 CAAILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPMVKPVSLELGGKSPIIVFEDVDLDKAVEWTIFWLLLDKWSN--L*CNISPSCARKHCSKFFKKDG*RESKTLRFPIPWXXXXXXXXXXXXGSMKKF*NFFQMAKTKGHHFWWGGALRDLLKKGIF 589
            C  +LKPSELASVTCLE  EVC EVGLPPG+LNI+TGLGP+AGAP+VSHP +DK+AFTGS+ATG +IMA+AA +VKPV+LELGGKSP+I+FED+D++ AVEWT+F +    W+N  +    S     +  +  F     + +K ++   P+            G   K   F   AK++G     GG+  + LKKG +
Sbjct:  182 CTTVLKPSELASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPIVSHPDIDKVAFTGSSATGSKIMASAAQLVKPVTLELGGKSPVIMFEDIDIETAVEWTLFGVF---WTNGQICSATSRLLVHESIAAEFVDRMVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILCGGSRPEHLKKGYY 376          
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: BADH_ORYSJ (Betaine aldehyde dehydrogenase OS=Oryza sativa subsp. japonica GN=Os04g0464200 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.096e-45
Identity = 98/196 (50.00%), Postives = 122/196 (62.24%), Query Frame = 2
Query:    2 CAAILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPMVKPVSLELGGKSPIIVFEDVDLDKAVEWTIFWLLLDKWSNL*CNISPSCARKHCSKFFKKDG*RESKTLRFPIPWXXXXXXXXXXXXGSMKKF*NFFQMAKTKGHHFWWGGALRDLLKKGIF 589
            C A+LKPSELAS+TCLEL  +C E+GLPPG+LNI+TGLG EAGAPL SHPHVDKIAFTGS  TG RIM  A+ MVKPVSLELGGKSP+IVF+DVD+DKAVEW +F    +    +    S     +  +K F       +K+++   P             G  +K   F   A+ +G    +GGA    LK+G F
Sbjct:  182 CTAVLKPSELASLTCLELGGICAEIGLPPGVLNIITGLGTEAGAPLASHPHVDKIAFTGSTETGKRIMITASQMVKPVSLELGGKSPLIVFDDVDIDKAVEWAMFGCFANA-GQVCSATSRLLLHEKIAKRFLDRLVAWAKSIKISDPLEEGCRLGSVVSEGQYQKIMKFISTARCEGATILYGGARPQHLKRGFF 376          
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: BADH_SCHPO (Probable betaine aldehyde dehydrogenase OS=Schizosaccharomyces pombe GN=meu8 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.102e-35
Identity = 56/108 (51.85%), Postives = 76/108 (70.37%), Query Frame = 2
Query:   11 ILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPMVKPVSLELGGKSPIIVFEDVDLDKAVEWTIFWLLLDK 334
            +LKPSELA  +CLE A +C+E GLP G+LN++ G G E+GA L  HP +  +AFTGS ATG +IM AAA  + P++LELGGKSP+I+ ED DL  A+    F +  ++
Sbjct:  194 VLKPSELAPWSCLEFALICKEAGLPDGVLNVIIGSGKESGAALSCHPKIAYLAFTGSLATGKKIMHAAAENIVPLTLELGGKSPLIICEDADLSLAIPSAAFAIFFNQ 301          

HSP 2 Score: 37.7354 bits (86), Expect = 2.102e-35
Identity = 26/89 (29.21%), Postives = 43/89 (48.31%), Query Frame = 1
Query:  403 GWLKGIQNIKISDSLEESCKFGPVVSEGQYEKILKFLSNGKNEGAPFLVXXXXXXXFEKGDFLKKPTLQNVELRTTKGKILGKKKDFFG 669
            G +     + I + L+     GPVVS+ Q+EKI+ ++ +  NEG   +V        +KG F+      NV+   T  KI   +++ FG
Sbjct:  324 GLVSEANKLIIGNGLDPQVTLGPVVSKTQFEKIVSYIQSAINEGCKCVVGGLPRSE-QKGYFIPPTVFTNVQ---THNKIW--REEIFG 406          

HSP 3 Score: 35.4242 bits (80), Expect = 2.102e-35
Identity = 15/33 (45.45%), Postives = 22/33 (66.67%), Query Frame = 3
Query:  312 SFGCFWTNGQICSATSRLLVHESIAANFLKRMV 410
            +F  F+  G+ C+A SRL+VHES+A   L  +V
Sbjct:  294 AFAIFFNQGEACTAASRLIVHESVADEVLGGLV 326          
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: AL2C4_ARATH (Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 5.992e-35
Identity = 55/112 (49.11%), Postives = 76/112 (67.86%), Query Frame = 2
Query:    2 CAAILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIM-AAAAPMVKPVSLELGGKSPIIVFEDVDLDKAVEWTIFWLLLDK 334
            C  ++KP+E  S++ L  A + +E G+P G+LNIVTG G  AGA + SH  VDK++FTGS   G +IM AAAA  +K VSLELGGKSP+++F D D+DKA +  +     +K
Sbjct:  187 CTMVVKPAEQTSLSALFYAHLSKEAGIPDGVLNIVTGFGSTAGAAIASHMDVDKVSFTGSTDVGRKIMQAAAASNLKKVSLELGGKSPLLIFNDADIDKAADLALLGCFYNK 298          

HSP 2 Score: 40.4318 bits (93), Expect = 5.992e-35
Identity = 21/58 (36.21%), Postives = 34/58 (58.62%), Query Frame = 1
Query:  433 ISDSLEESCKFGPVVSEGQYEKILKFLSNGKNEGAPFLVXXXXXXXFEKGDFLKKPTL 606
            + D  + + + GP V + Q+EKIL ++ +GKNEGA  L         +KG F+ +PT+
Sbjct:  331 VGDPFDSTARQGPQVDKRQFEKILSYIEHGKNEGATLLTGGKAIG--DKGYFI-QPTI 385          

HSP 3 Score: 35.4242 bits (80), Expect = 5.992e-35
Identity = 14/32 (43.75%), Postives = 22/32 (68.75%), Query Frame = 3
Query:  318 GCFWTNGQICSATSRLLVHESIAANFLKRMVE 413
            GCF+  G+IC A+SR+ V E I    ++++VE
Sbjct:  293 GCFYNKGEICVASSRVFVQEGIYDKVVEKLVE 324          
The following BLAST results are available for this feature:
BLAST of DY258182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 395
Match NameE-valueIdentityDescription
BADH_HORVU2.313e-6275.73Betaine aldehyde dehydrogenase OS=Hordeum vulgare ... [more]
BADH_SPIOL1.361e-4852.22Betaine aldehyde dehydrogenase, chloroplastic OS=S... [more]
BADH_BETVU9.750e-4750.25Betaine aldehyde dehydrogenase, chloroplastic OS=B... [more]
BADH1_ARATH1.273e-4652.26Betaine aldehyde dehydrogenase 1, chloroplastic OS... [more]
BADH2_ARATH1.663e-4651.52Betaine aldehyde dehydrogenase 2, mitochondrial OS... [more]
BADH_AMAHP2.172e-4650.51Betaine aldehyde dehydrogenase, chloroplastic OS=A... [more]
BADH_ATRHO6.320e-4648.48Betaine aldehyde dehydrogenase, chloroplastic OS=A... [more]
BADH_ORYSJ4.096e-4550.00Betaine aldehyde dehydrogenase OS=Oryza sativa sub... [more]
BADH_SCHPO2.102e-3551.85Probable betaine aldehyde dehydrogenase OS=Schizos... [more]
AL2C4_ARATH5.992e-3549.11Aldehyde dehydrogenase family 2 member C4 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3BG07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258182 ID=DY258182; Name=DY258182; organism=Citrus clementina; type=EST; length=713bp
ATGCGCTGCAATATTAAAGCCATCCGAATTGGCATCTGTGACCTGTTTGG
AGCTTGCTGAAGTGTGTAGAGAGGTGGGTCTTCCTCCCGGCATTCTTAAT
ATTGTCACCGGATTGGGTCCTGAAGCTGGGGCTCCTTTGGTATCCCATCC
CCATGTCGACAAGATTGCATTTACTGGAAGCAATGCAACAGGGATCAGGA
TAATGGCTGCTGCAGCTCCGATGGTCAAGCCTGTTTCTTTGGAGCTGGGA
GGAAAAAGTCCAATCATTGTGTTTGAGGATGTTGATCTAGATAAAGCGGT
TGAGTGGACCATCTTTTGGTTGCTTTTGGACAAATGGTCAAATCTGTAGT
GCAACATCTCGCCTTCTTGTGCACGAAAGCATTGCAGCAAATTTTTTAAA
AAGGATGGTTGAAGGGAATCCAAAACATTAAGATTTCCGATTCCCTGGAA
GAAAGTTGCAAATTTGGTCCTGTTGTTAGCGAAGGGCAGTATGAAAAAAT
TTTGAAATTTCTTTCAAATGGCAAAAACGAAGGGGCACCATTTTTGGTGG
GGGGGGGCCCTCCGGGACCTTTTGAAAAAGGGGATTTTTTGAAAAAACCA
ACCCTCCAAAACGTGGAATTACGCACAACTAAAGGGAAAATTTTGGGAAA
AAAAAAAGATTTTTTTGGGGAACCTGTTTTTTTGGGTGGTGTTAGGAGGG
GGTTTTTTTCCCC
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