DY258276

Overview
NameDY258276
Unique NameDY258276
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length819
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15531 contig Ccv1_Contig15531:329..1147. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSJ (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. japonica GN=Os09g0529100 PE=2 SV=2)

HSP 1 Score: 350.132 bits (897), Expect = 8.464e-96
Identity = 167/218 (76.61%), Postives = 192/218 (88.07%), Query Frame = 2
Query:    2 GSFTVFLSGGPLIDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQ-NSDLLPVQMASAEE-EFTWFLDKDATSKL 649
            G+FTV LSGG LI ++RKL EPPY+DS++W+KWHVFWVDERVVPKDH+DSNYKLA DGFLSKVPI TG VYAINDALSAEGAA+DYETCLK L K+ ++A S +TGFP+FD+MLLGMGPDGHIASLFPGHPL+ EN+KWVT+IKDSPKPPPERITFTFPVINSSAY+AMVV GAGK+ AVQ AL + Q +SDLLPV+MA  ++ EFTWF DK A S L
Sbjct:  104 GAFTVVLSGGSLIKNIRKLAEPPYLDSVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDSPKPPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSDLLPVEMAVLQDGEFTWFTDKPAVSML 321          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSI (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_031067 PE=3 SV=2)

HSP 1 Score: 350.132 bits (897), Expect = 8.464e-96
Identity = 167/218 (76.61%), Postives = 192/218 (88.07%), Query Frame = 2
Query:    2 GSFTVFLSGGPLIDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQ-NSDLLPVQMASAEE-EFTWFLDKDATSKL 649
            G+FTV LSGG LI ++RKL EPPY+DS++W+KWHVFWVDERVVPKDH+DSNYKLA DGFLSKVPI TG VYAINDALSAEGAA+DYETCLK L K+ ++A S +TGFP+FD+MLLGMGPDGHIASLFPGHPL+ EN+KWVT+IKDSPKPPPERITFTFPVINSSAY+AMVV GAGK+ AVQ AL + Q +SDLLPV+MA  ++ EFTWF DK A S L
Sbjct:  104 GAFTVVLSGGSLIKNIRKLAEPPYLDSVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDSPKPPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSDLLPVEMAVLQDGEFTWFTDKPAVSML 321          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL5_ARATH (Probable 6-phosphogluconolactonase 5, chloroplastic OS=Arabidopsis thaliana GN=EMB2024 PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 7.673e-89
Identity = 156/216 (72.22%), Postives = 180/216 (83.33%), Query Frame = 2
Query:    2 GSFTVFLSGGPLIDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 649
            G+FTV +SGG LI SLRKL+E PYVDSI+WA+WH FWVDERVVPK+HDDSNYKLAYD FLSKVPI  GNVYAIN+ALSAE AA+DYETCLKHL  +NIL  S +TGFPKFDLMLLGMGPDGH+ASLFPGH L  E++KWV  I DSPKPP ERITFTFPVINSSA++A+VVCG+GK+ AV+ AL   +  ++ P    SAE+E  WFLDK A+SKL
Sbjct:  112 GAFTVVVSGGSLIKSLRKLVESPYVDSIDWARWHFFWVDERVVPKNHDDSNYKLAYDSFLSKVPIPPGNVYAINEALSAEAAADDYETCLKHLVNTNILRVSESTGFPKFDLMLLGMGPDGHVASLFPGHGLCNESKKWVVSISDSPKPPSERITFTFPVINSSAHVALVVCGSGKAEAVEAAL--KKTGNVPPAGSVSAEDELVWFLDKPASSKL 325          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSJ (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0547100 PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.769e-85
Identity = 151/218 (69.27%), Postives = 177/218 (81.19%), Query Frame = 2
Query:    2 GSFTVFLSGGPLIDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQ-NSDLLPVQMASAEE-EFTWFLDKDATSKL 649
            G+FTV LSGG LI +LRKL E PY++++EW+KWHVFWVDERVVPKDH DSNYKLA DG LSKVPI    +YAIND LSAEGAA++YETCLK L    ++A S  TGFPK DLMLLGMGPDGH+ASLFPGHP++ EN KWV++IKDSPKPPPERITFTFP++NSSA+IA+VV GAGK+ AV  A  + Q +SDLLPV+M S +E   TWF DK A S L
Sbjct:  107 GAFTVALSGGSLIKALRKLTESPYLEAVEWSKWHVFWVDERVVPKDHADSNYKLAMDGLLSKVPIPASQIYAINDTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPKLDLMLLGMGPDGHVASLFPGHPVVNENLKWVSYIKDSPKPPPERITFTFPLVNSSAHIALVVTGAGKAGAVHKAFSDKQSSSDLLPVEMVSQQEGVLTWFTDKPAVSML 324          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSI (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_30141 PE=3 SV=2)

HSP 1 Score: 315.849 bits (808), Expect = 1.769e-85
Identity = 151/218 (69.27%), Postives = 177/218 (81.19%), Query Frame = 2
Query:    2 GSFTVFLSGGPLIDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQ-NSDLLPVQMASAEE-EFTWFLDKDATSKL 649
            G+FTV LSGG LI +LRKL E PY++++EW+KWHVFWVDERVVPKDH DSNYKLA DG LSKVPI    +YAIND LSAEGAA++YETCLK L    ++A S  TGFPK DLMLLGMGPDGH+ASLFPGHP++ EN KWV++IKDSPKPPPERITFTFP++NSSA+IA+VV GAGK+ AV  A  + Q +SDLLPV+M S +E   TWF DK A S L
Sbjct:  107 GAFTVALSGGSLIKALRKLTESPYLEAVEWSKWHVFWVDERVVPKDHADSNYKLAMDGLLSKVPIPASQIYAINDTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPKLDLMLLGMGPDGHVASLFPGHPVVNENLKWVSYIKDSPKPPPERITFTFPLVNSSAHIALVVTGAGKAGAVHKAFSDKQSSSDLLPVEMVSQQEGVLTWFTDKPAVSML 324          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL2_ARATH (Probable 6-phosphogluconolactonase 2 OS=Arabidopsis thaliana GN=At3g49360 PE=2 SV=2)

HSP 1 Score: 259.61 bits (662), Expect = 1.504e-68
Identity = 130/220 (59.09%), Postives = 155/220 (70.45%), Query Frame = 2
Query:    2 GSFTVFLSGGPLIDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEG----AAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 649
            G FTV LSGG LI  L KLLE PY+DSIEW+KWH+FWVDERV   DH DSNYKLAYDGFLSKVP+   N+YAI++ L AEG    AAE YE CLK     NI+ T  ++GFP+FDL LLGMGPDGH+ASLFPGH  + E  KWVT I DSPKPP +RIT T PVIN ++Y  M VC   ++ +V  AL + ++   LP    +A+ E  WFLD+ A SKL
Sbjct:   35 GVFTVVLSGGDLIAWLWKLLEAPYIDSIEWSKWHIFWVDERVCAWDHADSNYKLAYDGFLSKVPVPAENIYAIDNGLGAEGNAELAAERYEECLKQKVNQNIIRTYKSSGFPQFDLQLLGMGPDGHMASLFPGHAQINEKVKWVTSITDSPKPPSKRITLTLPVINCASYNVMAVCDKEQADSVAAALNHTKD---LPAGRLTADVEVVWFLDQAAASKL 251          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL3_ARATH (Probable 6-phosphogluconolactonase 3 OS=Arabidopsis thaliana GN=At5g24420 PE=2 SV=2)

HSP 1 Score: 256.914 bits (655), Expect = 9.752e-68
Identity = 128/220 (58.18%), Postives = 156/220 (70.91%), Query Frame = 2
Query:    2 GSFTVFLSGGPLIDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAED----YETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 649
            G FTV LSGG LID L KL++PPY+DSIEW KWHVFWVDERV   +  DSNYKLA +GFLSKVPI   N+YAI+  L+A+G AE     YE CLK+L K  I+  S  TG+P+FDL LLGMGPDGH+ASLFP HP + E +KWVT+I DSPKPPP+RITFT PVINS+ Y  M +C    + +V   + +N  S  LP    SA+ E  W+LD+ A S+L
Sbjct:   35 GLFTVVLSGGDLIDWLCKLVQPPYIDSIEWPKWHVFWVDERVCAWEDPDSNYKLAMEGFLSKVPIPDKNIYAIDKHLAADGNAEHCATLYEECLKNLVKEKIIPISKKTGYPEFDLQLLGMGPDGHMASLFPNHPQINEKQKWVTYITDSPKPPPKRITFTLPVINSTLYNLMAICDKAPAKSVAEIMKHNNLS--LPSAHLSAQVENVWYLDQAAASEL 252          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL4_ARATH (Probable 6-phosphogluconolactonase 4 OS=Arabidopsis thaliana GN=At5g24410 PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.839e-66
Identity = 126/220 (57.27%), Postives = 154/220 (70.00%), Query Frame = 2
Query:    2 GSFTVFLSGGPLIDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAED----YETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 649
            G FTV LSGG LI  L +LLEP Y +SIEW+KWH+FWVDERVVP DH+DSNYKLA+DGFLSKVPI   N+Y I+   +A G A+     YE CLK L   NI+ T  ++GFP+FDL LLGMGPDGH+ASLFPGH  +KE    VT+I DSPKPPP+RITFT PVIN ++Y  M VC   ++ AV     +N +   LP    +A+ E  WFLD+ A SK+
Sbjct:   41 GYFTVVLSGGDLISWLSELLEPKYQESIEWSKWHIFWVDERVVPLDHEDSNYKLAFDGFLSKVPIPIANIYPIDKDCAALGDAKSAALLYEECLKRLVNRNIIRTYKSSGFPQFDLQLLGMGPDGHMASLFPGHYQIKEKANLVTYITDSPKPPPKRITFTLPVINCASYNLMAVCDEAQADAVAKVFNHNFD---LPAAWLTADVEAIWFLDQAAASKI 257          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL2_ORYSJ (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. japonica GN=Os07g0604000 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.969e-60
Identity = 112/221 (50.68%), Postives = 148/221 (66.97%), Query Frame = 2
Query:    2 GSFTVFLSGGPLIDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNS----DLLPVQMAS-AEEEFTWFLDKDATSKL 649
            G F + LSGGPL+  L KL E PY  +++W+KW++FW DER V K+H +SNY++  +GFLSKVPI  G+VY+IND  + E AA DYE  ++ L K   +  S +   PKFDL+LL MG DGH+ASLFP HP L+  + W+T+I DSP+PPPERITFT PVINS++ IA+V  G  KS AV  A+ +N +       LP +M    + +  WFLDK A S L
Sbjct:   46 GYFAIALSGGPLVSFLGKLCEAPYNKTLDWSKWYIFWSDERAVAKNHAESNYRITKEGFLSKVPILNGHVYSINDNATVEDAATDYEFVIRQLVKVRTIGVSESNDCPKFDLILLSMGSDGHVASLFPNHPSLELKDDWITYITDSPQPPPERITFTLPVINSASNIAIVTTGDDKSEAVHLAISDNADGPEAPSSLPARMVQPTDGKLVWFLDKSAASSL 266          
BLAST of DY258276 vs. ExPASy Swiss-Prot
Match: 6PGL2_ORYSI (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. indica GN=OsI_025867 PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.969e-60
Identity = 112/221 (50.68%), Postives = 148/221 (66.97%), Query Frame = 2
Query:    2 GSFTVFLSGGPLIDSLRKLLEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNS----DLLPVQMAS-AEEEFTWFLDKDATSKL 649
            G F + LSGGPL+  L KL E PY  +++W+KW++FW DER V K+H +SNY++  +GFLSKVPI  G+VY+IND  + E AA DYE  ++ L K   +  S +   PKFDL+LL MG DGH+ASLFP HP L+  + W+T+I DSP+PPPERITFT PVINS++ IA+V  G  KS AV  A+ +N +       LP +M    + +  WFLDK A S L
Sbjct:   46 GYFAIALSGGPLVSFLGKLCEAPYNKTLDWSKWYIFWSDERAVAKNHAESNYRITKEGFLSKVPILNGHVYSINDNATVEDAATDYEFVIRQLVKVRTIGVSESNDCPKFDLILLSMGSDGHVASLFPNHPSLELKDDWITYITDSPQPPPERITFTLPVINSASNIAIVTTGDDKSEAVHLAISDNADGPEAPSSLPARMVQPTDGKLVWFLDKSAASSL 266          
The following BLAST results are available for this feature:
BLAST of DY258276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
6PGL4_ORYSJ8.464e-9676.61Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL4_ORYSI8.464e-9676.61Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL5_ARATH7.673e-8972.22Probable 6-phosphogluconolactonase 5, chloroplasti... [more]
6PGL3_ORYSJ1.769e-8569.27Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
6PGL3_ORYSI1.769e-8569.27Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
6PGL2_ARATH1.504e-6859.09Probable 6-phosphogluconolactonase 2 OS=Arabidopsi... [more]
6PGL3_ARATH9.752e-6858.18Probable 6-phosphogluconolactonase 3 OS=Arabidopsi... [more]
6PGL4_ARATH1.839e-6657.27Probable 6-phosphogluconolactonase 4 OS=Arabidopsi... [more]
6PGL2_ORYSJ1.969e-6050.68Probable 6-phosphogluconolactonase 2 OS=Oryza sati... [more]
6PGL2_ORYSI1.969e-6050.68Probable 6-phosphogluconolactonase 2 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3DH04ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258276 ID=DY258276; Name=DY258276; organism=Citrus clementina; type=EST; length=819bp
GGGCTCCTTCACTGTCTTCTTATCCGGTGGTCCTCTCATCGACTCCCTCA
GGAAATTATTGGAACCCCCGTATGTAGATTCAATTGAATGGGCGAAATGG
CATGTGTTTTGGGTTGATGAAAGAGTTGTTCCCAAGGATCATGATGATAG
CAATTATAAGCTTGCTTATGATGGTTTCCTTTCTAAGGTACCAATTACCA
CTGGCAATGTCTATGCCATCAATGATGCATTATCTGCTGAAGGTGCAGCT
GAAGATTATGAGACTTGTCTCAAGCATTTGACAAAGAGCAATATATTAGC
TACATCTGCTGCTACTGGTTTTCCAAAGTTTGATCTCATGCTTCTGGGTA
TGGGTCCAGATGGACATATAGCTTCTCTGTTTCCAGGGCATCCTCTTCTC
AAGGAGAATGAAAAATGGGTTACTTTCATTAAAGACTCGCCAAAGCCACC
TCCAGAGAGAATCACTTTCACCTTCCCTGTAATCAACTCATCTGCATATA
TTGCAATGGTGGTGTGTGGTGCTGGAAAATCAAGTGCAGTTCAAACTGCA
TTGGGTAATAATCAAAACTCTGATTTGCTGCCAGTTCAAATGGCATCGGC
TGAAGAAGAATTTACTTGGTTTCTTGACAAAGACGCGACTTCAAAGCTGT
AAGAGTCGGAACAATTAGCTGTATGCGTGAATCCCTGTTATCTGCTATGA
TAATTGGTTTGATCTGTGTGGTTTGACTACTAGTACTGCTGGATTTTGTT
AGTAATGAGAAAAGAGTGAACTTGTTAATGCAAGTGAAAAAGATTTGAAT
AAATATAGTTTGATATTTT
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