DY258285
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258285 vs. ExPASy Swiss-Prot
Match: UXS1_RAT (UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.908e-48 Identity = 91/167 (54.49%), Postives = 120/167 (71.86%), Query Frame = 3 Query: 18 SCYDEGKRTADTLTLDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVTNFVAHALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFTPNTEHDPHNRKPDISRAKELLGWEPKVSLRKGLPKMVKDFRQRI 518 +CYDEGKR A+T+ Y + GVEVR+ARIFNT+GPRM ++DGRVV+NF+ AL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM P NLGNP E T+LE AQ+++ + ++I+F + DP RKPDI +AK +LGWEP V L +GL K + FR+ + Sbjct: 229 ACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395
BLAST of DY258285 vs. ExPASy Swiss-Prot
Match: UXS1_PONAB (UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.908e-48 Identity = 91/167 (54.49%), Postives = 120/167 (71.86%), Query Frame = 3 Query: 18 SCYDEGKRTADTLTLDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVTNFVAHALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFTPNTEHDPHNRKPDISRAKELLGWEPKVSLRKGLPKMVKDFRQRI 518 +CYDEGKR A+T+ Y + GVEVR+ARIFNT+GPRM ++DGRVV+NF+ AL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM P NLGNP E T+LE AQ+++ + ++I+F + DP RKPDI +AK +LGWEP V L +GL K + FR+ + Sbjct: 229 ACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395
BLAST of DY258285 vs. ExPASy Swiss-Prot
Match: UXS1_MOUSE (UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.908e-48 Identity = 91/167 (54.49%), Postives = 120/167 (71.86%), Query Frame = 3 Query: 18 SCYDEGKRTADTLTLDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVTNFVAHALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFTPNTEHDPHNRKPDISRAKELLGWEPKVSLRKGLPKMVKDFRQRI 518 +CYDEGKR A+T+ Y + GVEVR+ARIFNT+GPRM ++DGRVV+NF+ AL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM P NLGNP E T+LE AQ+++ + ++I+F + DP RKPDI +AK +LGWEP V L +GL K + FR+ + Sbjct: 229 ACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395
BLAST of DY258285 vs. ExPASy Swiss-Prot
Match: UXS1_HUMAN (UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.908e-48 Identity = 91/167 (54.49%), Postives = 120/167 (71.86%), Query Frame = 3 Query: 18 SCYDEGKRTADTLTLDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVTNFVAHALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFTPNTEHDPHNRKPDISRAKELLGWEPKVSLRKGLPKMVKDFRQRI 518 +CYDEGKR A+T+ Y + GVEVR+ARIFNT+GPRM ++DGRVV+NF+ AL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM P NLGNP E T+LE AQ+++ + ++I+F + DP RKPDI +AK +LGWEP V L +GL K + FR+ + Sbjct: 229 ACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395
BLAST of DY258285 vs. ExPASy Swiss-Prot
Match: UXS1_DANRE (UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2 SV=2) HSP 1 Score: 186.422 bits (472), Expect = 1.786e-46 Identity = 89/167 (53.29%), Postives = 118/167 (70.66%), Query Frame = 3 Query: 18 SCYDEGKRTADTLTLDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVTNFVAHALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFTPNTEHDPHNRKPDISRAKELLGWEPKVSLRKGLPKMVKDFRQRI 518 +CYDEGKR A+T+ Y + GVEVR+ARIFNT+G RM ++DGRVV+NF+ AL+ E LTVYG G QTR+FQ+VSDLV GL+ LM P NLGNP E T+LE AQ+++ + + I+F P + DP R+PDI +AK LLGWEP V L +GL K ++ F + + Sbjct: 227 ACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGSRMHMNDGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVNGLVSLMNSNISSPVNLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKLLLGWEPVVPLEEGLNKTIQYFSREL 393
BLAST of DY258285 vs. ExPASy Swiss-Prot
Match: UXS1_XENTR (UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1 PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 5.197e-46 Identity = 87/167 (52.10%), Postives = 119/167 (71.26%), Query Frame = 3 Query: 18 SCYDEGKRTADTLTLDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVTNFVAHALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFTPNTEHDPHNRKPDISRAKELLGWEPKVSLRKGLPKMVKDFRQRI 518 +CYDEGKR A+T+ Y + GVEVR+ARIFNT+GPRM ++DGRVV+NF+ AL+ E LTVYG G+QTR+FQ+VSDLV GL+ LM P NLGNP E ++++ A+++++ + +I F + DP RKPDI +AK LLGWEP V L +GL K + FR+ + Sbjct: 230 ACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEQLTVYGSGEQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPQEHSIVQFARLIKQLVGSGGEISFLSEAQDDPQRRKPDIRKAKLLLGWEPVVPLEEGLNKTIHYFRKEL 396
BLAST of DY258285 vs. ExPASy Swiss-Prot
Match: YTCB_BACSU (Uncharacterized UDP-glucose epimerase ytcB OS=Bacillus subtilis GN=ytcB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.821e-18 Identity = 50/159 (31.45%), Postives = 86/159 (54.09%), Query Frame = 3 Query: 15 LSCYDEGKRTADTLTLDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVTNFVAHALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHV--GPFNLGNPGEFTMLELAQVVQETIDPNAKIEFTPNTEHDPHNRKPDISRAKELLGWEPKVSLRKGL 485 LS Y K T + L Y + G+ + I R F YGPR D + L+++PLT++GDG+Q+R F ++SD V+G+ ++ H+ N+G ++L++ ++++ A + F+ +P N DIS+AK+LL ++P SL+ GL Sbjct: 146 LSPYGVTKLTGEKLCHVYKQSFGIPIVILRFFTVYGPRQRPD--MAFHRLIKQHLQQKPLTIFGDGQQSRDFTYISDCVKGITAVLGKPHLIGETVNIGGAERASVLKVVSLIEDISGRKATLHFSDKIAGEPSNTWADISKAKQLLHYDPATSLKDGL 302
BLAST of DY258285 vs. ExPASy Swiss-Prot
Match: GME_ARATH (GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana GN=At5g28840 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.355e-14 Identity = 53/159 (33.33%), Postives = 77/159 (48.43%), Query Frame = 3 Query: 24 YDEGKRTADTLTLDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVTNFVAHALRK-----EPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFTPNTEHDPHNRKPDISRAKELLGWEPKVSLRKGL 485 Y K + L Y++ G+E RI R N YGP GR A RK + ++GDG QTRSF F+ + VEG++RL + + P N+G+ +M E+A++V + I P E R D + KE LGW P + L++GL Sbjct: 174 YGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGR--EKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPE-GVRGRNSDNNLIKEKLGWAPNMRLKEGL 329
BLAST of DY258285 vs. ExPASy Swiss-Prot
Match: GME2_ORYSJ (GDP-mannose 3,5-epimerase 2 OS=Oryza sativa subsp. japonica GN=GME-2 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.355e-14 Identity = 52/157 (33.12%), Postives = 75/157 (47.77%), Query Frame = 3 Query: 24 YDEGKRTADTLTLDYHRGAGVEVRIARIFNTYGPRMCIDDGR--VVTNFVAHALRK-EPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFTPNTEHDPHNRKPDISRAKELLGWEPKVSLRKGL 485 Y K + L Y + G+E R+ R N YGP GR F AL + ++GDG QTRSF F+ + VEG++RL + + P N+G+ +M E+A++V + I P E R D + KE LGW P + L+ GL Sbjct: 168 YGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKQLPIHHIPGPE-GVRGRNSDNTLIKEKLGWAPTMRLKDGL 323
BLAST of DY258285 vs. ExPASy Swiss-Prot
Match: GME1_ORYSJ (GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. japonica GN=GME-1 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.017e-14 Identity = 52/159 (32.70%), Postives = 75/159 (47.17%), Query Frame = 3 Query: 24 YDEGKRTADTLTLDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVTNFVAHALRK-----EPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFTPNTEHDPHNRKPDISRAKELLGWEPKVSLRKGL 485 Y K + L Y + G+E R+ R N YGP GR A RK + ++GDG QTRSF F+ + VEG++RL + + P N+G+ +M E+A+++ D I P E R D + KE LGW P + L+ GL Sbjct: 175 YGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGR--EKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPIHHIPGPE-GVRGRNSDNTLIKEKLGWAPTMKLKDGL 330 The following BLAST results are available for this feature:
BLAST of DY258285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258285 ID=DY258285; Name=DY258285; organism=Citrus clementina; type=EST; length=873bpback to top |