DY258288

Overview
NameDY258288
Unique NameDY258288
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1220
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258288 vs. ExPASy Swiss-Prot
Match: SSG1_MANES (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta GN=WAXY PE=2 SV=1)

HSP 1 Score: 469.929 bits (1208), Expect = 1.317e-131
Identity = 239/358 (66.76%), Postives = 272/358 (75.98%), Query Frame = 3
Query:    3 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTXGF--------------G*HCGXKALQDSRWEASVLTVRLWIP*MWLQCHHRPKTLATLWTQALAEMIKMGWPQNLSGKEPT*KWEE 1034
            HT+L+PCYLK +Y+P G+YK AKV FCIHNIAYQGRFAF DF  LNLP +FKSSFDFIDGY KPV+GRKINWMKAGILESD VLTVSP+YAQE++SG ++GVELDN IRKTGI GI+NGMDVQEWNP+TDKYI + YDA+TVMDAKPLLKEALQAEVGLPVDRN+P+IGFIGRLEEQKGSDI  AAI   ++ NVQI++LGTGKK  EKQ+E LE+LYP+KARGVAKFN+PLAHMI AGADF+L+PSRFEPCGLIQLHAMRYGTVPIVAST G                 H     +  +   A V TV               + L T  T AL EMI     Q+LS K P   WE+
Sbjct:  235 HTALLPCYLKAIYQPMGIYKHAKVAFCIHNIAYQGRFAFSDFPRLNLPDKFKSSFDFIDGYEKPVKGRKINWMKAGILESDRVLTVSPYYAQEVISGVERGVELDNFIRKTGIAGIINGMDVQEWNPVTDKYIDIHYDATTVMDAKPLLKEALQAEVGLPVDRNVPLIGFIGRLEEQKGSDIFVAAISQLVEHNVQIVILGTGKKKFEKQIEHLEVLYPDKARGVAKFNVPLAHMITAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGYTGFQMGALHVECDKIDSADVAAIVKTV--------------ARALGTYATAALREMILNCMAQDLSWKGPARMWEK 578          
BLAST of DY258288 vs. ExPASy Swiss-Prot
Match: SSG1_SOLTU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum GN=WAXY PE=1 SV=1)

HSP 1 Score: 456.062 bits (1172), Expect = 1.968e-127
Identity = 237/353 (67.14%), Postives = 271/353 (76.77%), Query Frame = 3
Query:    3 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTXGF---------G*HCGXKALQ-DSRWEASVLTVRLWIP*MWLQCHHRPKTLATLWTQALAEMIKMGWPQNLSGKEPT*KWE 1031
            HT+LIPCYLK+MY+ +G+Y +AKV FCIHNIAYQGRF+F DF LLNLP +F+ SFDFIDGY KPV+GRKINWMKAGILES  V+TVSP+YAQELVS  DKGVELD+++RKT I GIVNGMD QEWNP TDKY  VKYD +TVMDAKPLLKEALQA VGLPVD+ IP+IGFIGRLEEQKGSDIL AAI  FI  +VQI+VLGTGKK  E+++EQLE+LYP KA+GVAKFN+PLAHMI AGADF+L+PSRFEPCGLIQLHAMRYGTVPI AST G          G H G   ++ D    A VL +   +           + LA   T A AEMIK    + LS KEP  KWE
Sbjct:  234 HTALIPCYLKSMYQSRGIYLNAKVAFCIHNIAYQGRFSFSDFPLLNLPDEFRGSFDFIDGYEKPVKGRKINWMKAGILESHRVVTVSPYYAQELVSAVDKGVELDSVLRKTCITGIVNGMDTQEWNPATDKYTDVKYDITTVMDAKPLLKEALQAAVGLPVDKKIPLIGFIGRLEEQKGSDILVAAIHKFIGLDVQIVVLGTGKKEFEQEIEQLEVLYPNKAKGVAKFNVPLAHMITAGADFMLVPSRFEPCGLIQLHAMRYGTVPICASTGGLVDTVKEGYTGFHMGAFNVECDVVDPADVLKIVTTV----------ARALAVYGTLAFAEMIKNCMSEELSWKEPAKKWE 576          
BLAST of DY258288 vs. ExPASy Swiss-Prot
Match: SSG1_ANTMA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Antirrhinum majus GN=WAXY PE=2 SV=1)

HSP 1 Score: 449.899 bits (1156), Expect = 1.411e-125
Identity = 232/354 (65.54%), Postives = 268/354 (75.71%), Query Frame = 3
Query:    3 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTXGF---------G*HCGXKALQDSRWE-ASVLTVRLWIP*MWLQCHHRPKTLATLWTQALAEMIKMGWPQNLSGKEPT*KWEE 1034
            HT+L+PCYLK+MY+ KGMY  AKV FCIHNIAYQGRF   DF LLNLP QFKSSFDF DGY KPV+GRKINWMKAGILESD V+TVSP+YA ELVSG +KGVELDN+I KT I GIVNGMD QEWNP TDK+I   YD +TVMDAKPLLKEALQA VGLPVD+NIPVIGFIGRLEEQKGSDIL AAI  F+  +VQII+LGTGKK  E+Q+++LE+LYP+KARGVAKFN+PLAHMI AGADF+L+PSRFEPCGLIQLHAMRYGT+PI AST G          G H G   ++ +  + A V  +   +           + LA   + A  EMI+    Q+LS K P   WE+
Sbjct:  235 HTALLPCYLKSMYQSKGMYLHAKVAFCIHNIAYQGRFGSSDFCLLNLPDQFKSSFDFFDGYEKPVKGRKINWMKAGILESDRVVTVSPYYAMELVSGAEKGVELDNVIAKTSITGIVNGMDTQEWNPATDKHIDTNYDITTVMDAKPLLKEALQAAVGLPVDKNIPVIGFIGRLEEQKGSDILVAAISKFVGLDVQIIILGTGKKKFEQQIQELEVLYPDKARGVAKFNVPLAHMITAGADFMLVPSRFEPCGLIQLHAMRYGTIPICASTGGLVDTVTEGFTGFHMGAFNVECATVDPADVQKIATTV----------ERALAAYGSVAYKEMIQNCMAQDLSWKGPAKNWEK 578          
BLAST of DY258288 vs. ExPASy Swiss-Prot
Match: SSG1_IPOBA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Ipomoea batatas GN=WAXY PE=2 SV=2)

HSP 1 Score: 441.039 bits (1133), Expect = 6.552e-123
Identity = 232/353 (65.72%), Postives = 263/353 (74.50%), Query Frame = 3
Query:    3 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTXGF---------G*HCGXKALQ-DSRWEASVLTVRLWIP*MWLQCHHRPKTLATLWTQALAEMIKMGWPQNLSGKEPT*KWE 1031
            HT+L+PCYLKTMY+ +G+Y +AKV FCIHNIAYQGRFAF DF LLNLP ++K SFDFIDGY+KPV+GRKINWMKAGI E+D V TVSP+YA+ELVS   KGVELDN IR  GI GI NGMD QEWNP TDKY+ VKYD +TVM AKPLLKEALQA VGLPVDRNIP+IGFIGRLEEQKGSDIL AAI  FI  +VQI++LGTGKK  E+Q+EQLE++YP+KARGVAKFN+PLAHMI AGADF+LIPSRFEPCGLIQLHAMRYGT  I AST G          G H G   +  ++     VL V   +           + LA   T A  EMIK    Q LS K P   WE
Sbjct:  235 HTALLPCYLKTMYQSRGIYMNAKVAFCIHNIAYQGRFAFSDFSLLNLPDEYKGSFDFIDGYDKPVKGRKINWMKAGIREADRVFTVSPNYAKELVSCVSKGVELDNHIRDCGITGICNGMDTQEWNPATDKYLAVKYDITTVMQAKPLLKEALQAAVGLPVDRNIPLIGFIGRLEEQKGSDILYAAISKFISMDVQILILGTGKKKFEQQIEQLEVMYPDKARGVAKFNVPLAHMITAGADFMLIPSRFEPCGLIQLHAMRYGTPCICASTGGLVDTVKEGYTGFHMGAFNVDCETVDPEDVLKVITTV----------GRALAMYGTLAFTEMIKNCMSQELSWKGPAKNWE 577          
BLAST of DY258288 vs. ExPASy Swiss-Prot
Match: SSG1_PEA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 433.721 bits (1114), Expect = 1.046e-120
Identity = 226/358 (63.13%), Postives = 263/358 (73.46%), Query Frame = 3
Query:    3 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTXGF---------G*HCG-----XKALQDSRWEASVLTVRLWIP*MWLQCHHRPKTLATLWTQALAEMIKMGWPQNLSGKEPT*KWEE 1034
            H++LIPCYLK+MYK +G+YK+AKV FCIHNIAYQGR AF DF LLNLP +F+SSFDFIDGYNKP  G+KINWMKAGILESD V TVSPHYA+EL+SGED+GVELDNIIR TGI GIVNGMD +EW+P TD+YI V Y+ +TV +AKPLLK  LQAE+GLPVD +IP+IGFIGRLEEQKGSDIL  AI  F  ENVQI+VLGTGKK MEKQ+E LE  YP KA G+ KFN PLAH IIAGADFI+IPSRFEPCGL+QLHAM YGTVPIV+ST G          G H G      + +     +    TV+              + L T  TQA+ ++I     QN S K+P   WE+
Sbjct:  230 HSALIPCYLKSMYKSRGLYKNAKVAFCIHNIAYQGRNAFSDFSLLNLPDEFRSSFDFIDGYNKPCEGKKINWMKAGILESDQVFTVSPHYAKELISGEDRGVELDNIIRSTGIIGIVNGMDNREWSPQTDRYIDVHYNETTVTEAKPLLKGTLQAEIGLPVDSSIPLIGFIGRLEEQKGSDILVEAIAKFADENVQIVVLGTGKKIMEKQIEVLEEKYPGKAIGITKFNSPLAHKIIAGADFIVIPSRFEPCGLVQLHAMPYGTVPIVSSTGGLVDTVKEGYTGFHAGPFDVECEDVDPDDVDKLAATVK--------------RALKTYGTQAMKQIILNCMAQNFSWKKPAKLWEK 573          
BLAST of DY258288 vs. ExPASy Swiss-Prot
Match: SSG1_ARATH (Probable granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=WAXY PE=2 SV=1)

HSP 1 Score: 428.713 bits (1101), Expect = 3.365e-119
Identity = 220/360 (61.11%), Postives = 260/360 (72.22%), Query Frame = 3
Query:    3 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTXG----------------FG*HCGXKALQDSRWEASVLTVRLWIP*MWLQCHHRPKTLATLWTQALAEMIKMGWPQNLSGKEPT*KWEE 1034
            HT+L+PCYLK+MY+ +G+Y +AKVVFCIHNIAYQGRFAF+D+ LLNLP  FKSSFDF+DGY KPV+GRKINWMKA ILE+  VLTVSP+YAQEL+SG D+GVEL   +R   + GI+NGMDVQEWNP TDKYI +KYD +TV DAKPL+KEALQA VGLPVDR++PVIGFIGRLEEQKGSDIL  AI  F+  NVQ+++LGTGKK ME Q+ +LE  +P KA GVAKFN+PLAHMI AGADFI++PSRFEPCGLIQLHAMRYGTVPIVAST G                F   C      D    A  +T                + +A   T A+ EM+K    Q+ S K P   WE+
Sbjct:  237 HTALLPCYLKSMYQSRGVYMNAKVVFCIHNIAYQGRFAFDDYSLLNLPISFKSSFDFMDGYEKPVKGRKINWMKAAILEAHRVLTVSPYYAQELISGVDRGVELHKYLRMKTVSGIINGMDVQEWNPSTDKYIDIKYDITTVTDAKPLIKEALQAAVGLPVDRDVPVIGFIGRLEEQKGSDILVEAISKFMGLNVQMVILGTGKKKMEAQILELEEKFPGKAVGVAKFNVPLAHMITAGADFIIVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKDGYTGFHIGRFNVKCEVVDPDDVIATAKAVT----------------RAVAVYGTSAMQEMVKNCMDQDFSWKGPARLWEK 580          
BLAST of DY258288 vs. ExPASy Swiss-Prot
Match: SSG1B_HORVU (Granule-bound starch synthase 1b, chloroplastic/amyloplastic (Fragment) OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 395.586 bits (1015), Expect = 3.157e-109
Identity = 208/354 (58.76%), Postives = 250/354 (70.62%), Query Frame = 3
Query:    3 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK-GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTXGF---------G*HCGXKALQDSRWEASVLTVRLWIP*MWLQCHHRPKTLATLWTQALAEMIKMGWPQNLSGKEPT*KWEE 1034
            HT+++PCYLK+MYK  G+Y++AKV FCIHNIAYQGRF   DF LLNLP  F  SFDF+DG+ KPV GRKINWMKAGI E D+VLTVSPHY +EL SG +KGVELD ++R   ++ GIVNGMDV +WNP TDKYI VKY+A+TV  A+ L KE LQAEVGL VD +IPVI FIGRLEEQKGSDIL AA P F++ENVQIIVLGTGKK ME++L  LE+ YP+ ARG+AKFN+PLAHM+ AGADFI+IPSRFEPCGLIQL  M YG VPI +ST G          G H G   ++    + + +              +  + L    T     M++    Q+LS K P  KWEE
Sbjct:  191 HTAVLPCYLKSMYKQNGIYENAKVAFCIHNIAYQGRFPRADFELLNLPESFMPSFDFVDGHVKPVVGRKINWMKAGITECDVVLTVSPHYVKELTSGPEKGVELDGVLRTKPLETGIVNGMDVIDWNPATDKYISVKYNATTVAQARALNKEILQAEVGLSVDSSIPVIVFIGRLEEQKGSDILIAASPEFVEENVQIIVLGTGKKKMEEELMLLEVKYPQNARGIAKFNVPLAHMMFAGADFIIIPSRFEPCGLIQLQGMSYGVVPICSSTGGLVDTVREGVTGFHMGSFNVEFETVDPTDVAA---------VGSNVTRALKQYRTPVFHAMVQNCMAQDLSWKGPAKKWEE 535          
BLAST of DY258288 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa GN=WAXY PE=3 SV=1)

HSP 1 Score: 392.889 bits (1008), Expect = 2.046e-108
Identity = 205/357 (57.42%), Postives = 248/357 (69.47%), Query Frame = 3
Query:    3 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTXGF---------G*HCG-----XKALQDSRWEASVLTVRLWIP*MWLQCHHRPKTLATLWTQALAEMIKMGWPQNLSGKEPT*KWE 1031
            HT  +P YLK  Y+P G+Y++AKV FCIHNI+YQGRFAFED+  LNL  +FKSSFDFIDGY+ PV GRKINWMKAGILESD VLTVSP+YA+EL+SG  +G ELDNI+R TGI GIVNGMDV EW+P  DKYI  KYDA+T ++AK L KEALQAE GLPVDR +P+I FIGRLEEQKG D++AAAIP  ++ENVQI++LGTGKK  EK L+ +E  YP K R V KFN PLAH+I+AGAD + +PSRFEPCGLIQL  MRYGT    AST G          G H G      K ++ S  +    T++              + +  + T A  EM++    Q+LS K P   WE
Sbjct:  233 HTGPLPSYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFKSSFDFIDGYDTPVEGRKINWMKAGILESDRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITTKYDATTAIEAKALNKEALQAEAGLPVDRKVPLIAFIGRLEEQKGPDVMAAAIPELMQENVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVQKVATTLK--------------RAIKIVGTPAYNEMVRNCMNQDLSWKGPAKNWE 575          
BLAST of DY258288 vs. ExPASy Swiss-Prot
Match: SSG1_HORVU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Hordeum vulgare GN=WAXY PE=1 SV=1)

HSP 1 Score: 387.111 bits (993), Expect = 1.123e-106
Identity = 200/355 (56.34%), Postives = 251/355 (70.70%), Query Frame = 3
Query:    3 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTXGF---------G*HCGXKALQDSRWE-ASVLTVRLWIP*MWLQCHHRPKTLATLWTQALAEMIKMGWPQNLSGKEPT*KWEE 1034
            HT L+ CYLK+ Y+  G+Y++AKV FCIHNI+YQGRF+F+DF  LNLP +FKSSFDFIDGY+KPV GRKINWMKAGIL++D VLTVSP+YA+EL+SGE +G ELDNI+R TGI GIVNGMDV EW+P  DK++ V YD +T ++AK L KEALQAEVGLPVDR +P++ FIGRLEEQKG D++ AAIP  +K E+VQII+LGTGKK  EK L+ +E  +P K R V +FN PLAH ++AGAD + + SRFEPCGLIQL  MRYGT  + AST G          G H G  ++  +  E A V  V   +           + +  + T A  EM+K    Q+LS K P   WE+
Sbjct:  229 HTGLLACYLKSNYQSNGIYRTAKVAFCIHNISYQGRFSFDDFAQLNLPDRFKSSFDFIDGYDKPVEGRKINWMKAGILQADKVLTVSPYYAEELISGEARGCELDNIMRLTGITGIVNGMDVSEWDPTKDKFLAVNYDITTALEAKALNKEALQAEVGLPVDRKVPLVAFIGRLEEQKGPDVMIAAIPEILKEEDVQIILLGTGKKKFEKLLKSMEEKFPGKVRAVVRFNAPLAHQMMAGADLLAVTSRFEPCGLIQLQGMRYGTPCVCASTGGLVDTIVEGKTGFHMGRLSVDCNVVEPADVKKVATTL----------KRAVKVVGTPAYQEMVKNCMIQDLSWKGPAKNWED 573          
BLAST of DY258288 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSJ (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=WAXY PE=1 SV=1)

HSP 1 Score: 386.341 bits (991), Expect = 1.915e-106
Identity = 202/357 (56.58%), Postives = 247/357 (69.19%), Query Frame = 3
Query:    3 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTXGF---------G*HCG-----XKALQDSRWEASVLTVRLWIP*MWLQCHHRPKTLATLWTQALAEMIKMGWPQNLSGKEPT*KWE 1031
            HT  +  YLK  Y+P G+Y++AKV FCIHNI+YQGRFAFED+  LNL  +F+SSFDFIDGY+ PV GRKINWMKAGILE+D VLTVSP+YA+EL+SG  +G ELDNI+R TGI GIVNGMDV EW+P  DKYI  KYDA+T ++AK L KEALQAE GLPVDR IP+I FIGRLEEQKG D++AAAIP  ++E+VQI++LGTGKK  EK L+ +E  YP K R V KFN PLAH+I+AGAD + +PSRFEPCGLIQL  MRYGT    AST G          G H G      K ++ S  +    T++              + +  + T A  EM++    Q+LS K P   WE
Sbjct:  236 HTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLK--------------RAIKVVGTPAYEEMVRNCMNQDLSWKGPAKNWE 578          
The following BLAST results are available for this feature:
BLAST of DY258288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 363
Match NameE-valueIdentityDescription
SSG1_MANES1.317e-13166.76Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_SOLTU1.968e-12767.14Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_ANTMA1.411e-12565.54Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_IPOBA6.552e-12365.72Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_PEA1.046e-12063.13Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_ARATH3.365e-11961.11Probable granule-bound starch synthase 1, chloropl... [more]
SSG1B_HORVU3.157e-10958.76Granule-bound starch synthase 1b, chloroplastic/am... [more]
SSG1_ORYSA2.046e-10857.42Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_HORVU1.123e-10656.34Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_ORYSJ1.915e-10656.58Granule-bound starch synthase 1, chloroplastic/amy... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAI1AB04FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258288 ID=DY258288; Name=DY258288; organism=Citrus clementina; type=EST; length=1220bp
GGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATAAGCCCAAA
GGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAATATTGCTTA
CCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCTTCCAGCTC
AATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAACCTGTGAGA
GGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCAGACATGGT
CTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTGGTGAAGACA
AAGGAGTAGAATTGGATAACATCATCCGTAAAACTGGCATTAAGGGAATT
GTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGACAAATATAT
AGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGCCTCTTCTGA
AGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGAAATATTCCT
GTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCAGATATTCT
TGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTTCAGATAATAGTCC
TTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGAACAGTTGGAGATA
CTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCAATATTCCTCTGGC
GCATATGATAATAGCAGGAGCTGATTTTATTTTGATTCCAAGCAGATTTG
AACCTTGTGGTCTCATTCAATTACATGCCATGCGTTATGGAACCGTACCT
ATCGTGGCTTCCACTGNTGGGTTTGGTTGACACTGTGGAANGAAGGCTTT
ACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGGATCC
CGTAAATGTGGCTGCAGTGTCACCACCGTCCGAAGACTCTTGCAACCTTA
TGGACTCAAGCTTTGGCTGAAATGATAAAAATGGGCTGGCCCCAAAATCT
TTCAGGGAAAGAACCCACTTAAAAATGGGAAGAAAACCCACCTTAACCCC
GAAAATTGCTGGGAATTGAACCCCGGAATTGACCGGCAAAAAAATTCCCC
CCCTTTGCCAAGGAAAAAATGGGCCCCCTCCCCTTAACTCAAGGCCACAA
AAAACCCCCCCTCTTTTTTTTTTTGAACCCCCCAAAACCTTTCTCCCCTA
TATCTTCCCCCCCACCCCCC
back to top