DY259991

Overview
NameDY259991
Unique NameDY259991
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length917
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1388 contig Ccv1_Contig1388:1..916. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_PEA (Imidazoleglycerol-phosphate dehydratase OS=Pisum sativum GN=HIS3 PE=2 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 5.775e-83
Identity = 161/213 (75.59%), Postives = 178/213 (83.57%), Query Frame = 3
Query:  183 STQYCSSTRRMNSLTTPRASLNPDGDSKHNNGSASTSSAVD-SGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            S  + + T  MN  TT   SL+     +HNNGS STS       R+GEVKRVTKETNVSVKIN+DGSGVADSST IPFLDHMLDQLASHGLFDVHV+ATGD+HIDDHHTNEDV LAIGTALLQALGDRKGINRFGDF+APLDEALIHVSLDLSGRPHL+Y+L IPTQ+VGTY+TQ+VE   QS+VNTSGM   I+QLAG+NS HIIEAT KAF
Sbjct:   44 SPNHLTLTTPMNPPTT---SLSSAAFVEHNNGSTSTSLPFHPETRVGEVKRVTKETNVSVKINLDGSGVADSSTGIPFLDHMLDQLASHGLFDVHVKATGDVHIDDHHTNEDVALAIGTALLQALGDRKGINRFGDFSAPLDEALIHVSLDLSGRPHLSYNLDIPTQRVGTYDTQVVEHFLQSIVNTSGMTLHIRQLAGRNSHHIIEATFKAF 253          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7B_ARATH (Imidazoleglycerol-phosphate dehydratase 2 OS=Arabidopsis thaliana GN=At4g14910 PE=2 SV=2)

HSP 1 Score: 306.22 bits (783), Expect = 1.680e-82
Identity = 164/227 (72.25%), Postives = 183/227 (80.62%), Query Frame = 3
Query:  162 SRKLLPISTQYCSSTRR------MNSLTTPRASLNPDGDSKHNNG--SASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            SR LLP  T   SS         MNS +  R S++       +NG  + +T+S ++S RIGEVKR TKETNVSVKIN+DG GV+DSST IPFLDHMLDQLASHGLFDVHVRATGD HIDDHHTNEDV LAIGTALL+ALG+RKGINRFGDFTAPLDEALIHVSLDLSGRP+L Y+L+IPTQ+VGTY+TQLVE  FQSLVNTSGM   I+QLAGKNS HIIEAT KAF
Sbjct:   18 SRALLPPRTSIASSHPPPPRFLVMNSQSQHRPSISCASPPPGDNGFPAITTASPIESARIGEVKRETKETNVSVKINLDGHGVSDSSTGIPFLDHMLDQLASHGLFDVHVRATGDTHIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSGRPYLGYNLEIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAF 244          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7A_ARATH (Imidazoleglycerol-phosphate dehydratase 1 OS=Arabidopsis thaliana GN=At3g22425 PE=1 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 8.339e-82
Identity = 161/222 (72.52%), Postives = 185/222 (83.33%), Query Frame = 3
Query:  159 LSRKLLPISTQYCSSTR--RMNSLTTPRASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            L R+ + +S+   S  R  RM S +  R S++          SAS+SS++  GRIGEVKRVTKETNVSVKIN+DG+GVADSS+ IPFLDHMLDQLASHGLFDVHVRATGD+HIDDHHTNED+ LAIGTALL+ALG+RKGINRFGDFTAPLDEALIHVSLDLSGRP+L Y+L+IPTQ+VGTY+TQLVE  FQSLVNTSGM   I+QLAG+NS HIIEAT KAF
Sbjct:   30 LPRRAMIVSSPSSSLPRFLRMESQSQLRQSISC---------SASSSSSMALGRIGEVKRVTKETNVSVKINLDGTGVADSSSGIPFLDHMLDQLASHGLFDVHVRATGDVHIDDHHTNEDIALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSGRPYLGYNLEIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGENSHHIIEATFKAF 242          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_WHEAT (Imidazoleglycerol-phosphate dehydratase (Fragment) OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 1.334e-71
Identity = 135/167 (80.84%), Postives = 148/167 (88.62%), Query Frame = 3
Query:  318 GEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            GEVKRVTKETNV VKIN+DG+GVA+SST IPFLDHMLDQLASHGLFDV+V+ATGD HIDDHH+NED+ LAIGTALLQALGDRKGINRFG FTAPLDEA + V LDLSGRPHL+  L IPT++VGTY+TQLVE  FQSLVNTSGM   I+QLAG NS HIIEAT KAF
Sbjct:    1 GEVKRVTKETNVHVKINLDGTGVANSSTGIPFLDHMLDQLASHGLFDVYVKATGDTHIDDHHSNEDIALAIGTALLQALGDRKGINRFGHFTAPLDEAAVEVILDLSGRPHLSCGLSIPTERVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGNNSHHIIEATFKAF 167          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_SYNS9 (Imidazoleglycerol-phosphate dehydratase OS=Synechococcus sp. (strain CC9902) GN=hisB PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 2.565e-62
Identity = 106/169 (62.72%), Postives = 135/169 (79.88%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R GEV R T ET+V VK+++DGSG  ++ST +PFLDHML+Q++SHGL D+ + A GD HIDDHHTNEDVG+A+G AL QALGDRKGI+RFG F APLDEAL+ V+LD SGRPH++Y L IPTQK+G+Y+T+LV+  F ++ N SG+   I+QL G NS HI+EA  KAF
Sbjct:    2 RTGEVHRHTGETDVKVKLDLDGSGCCEASTGVPFLDHMLNQISSHGLIDLTITAVGDTHIDDHHTNEDVGIAVGQALSQALGDRKGIHRFGHFVAPLDEALVQVALDCSGRPHISYGLTIPTQKIGSYDTELVKEFFVAVANNSGLTLHIRQLDGVNSHHIVEACFKAF 170          

HSP 2 Score: 36.5798 bits (83), Expect = 2.565e-62
Identity = 17/26 (65.38%), Postives = 20/26 (76.92%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K FARALR AT++ PRR G IP+ KG
Sbjct:  168 KAFARALRMATEIDPRRAGAIPSSKG 193          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_SYNPW (Imidazoleglycerol-phosphate dehydratase OS=Synechococcus sp. (strain WH7803) GN=hisB PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 5.687e-62
Identity = 106/169 (62.72%), Postives = 134/169 (79.29%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R GE+ RVT ET+V V++N+DGSG   +ST + FLDHML Q++SHGL D+ + A GD HIDDHHTNEDVG+A+G AL QALGDR+GI+RFG F APLDEAL+ V+LD SGRPHL+Y L IP+QK+GTY+T+LV+  F ++VN SG+   I+QL G NS HI+EA  KAF
Sbjct:    3 RTGEIHRVTGETDVQVRLNLDGSGQCQASTGVAFLDHMLQQISSHGLIDLEISARGDTHIDDHHTNEDVGIAVGQALAQALGDRRGIHRFGHFLAPLDEALVQVALDCSGRPHLSYSLSIPSQKIGTYDTELVKEFFVAVVNNSGLTLHIRQLDGANSHHIVEACFKAF 171          

HSP 2 Score: 34.2686 bits (77), Expect = 5.687e-62
Identity = 15/26 (57.69%), Postives = 20/26 (76.92%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K FARALR+AT++ PRR   +P+ KG
Sbjct:  169 KAFARALRQATEIDPRRADAVPSSKG 194          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_SYNPX (Imidazoleglycerol-phosphate dehydratase OS=Synechococcus sp. (strain WH8102) GN=hisB PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 9.668e-62
Identity = 104/169 (61.54%), Postives = 135/169 (79.88%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R G++ RVT ET+V V++++DGSG   +ST +PFLDHML Q++SHGL D+ + A GD HIDDHHTNEDVG+A+G AL QALGDR+GI+RFG F APLDEAL+ V+LD SGRPHL+Y L IP+QK+G+Y+T+LV+  F ++VN SG+   I+QL G NS HI+EA  KAF
Sbjct:    3 RQGDIHRVTGETDVKVRLDLDGSGQCQASTGVPFLDHMLHQISSHGLIDLEINAVGDTHIDDHHTNEDVGIAVGQALAQALGDRRGIHRFGHFAAPLDEALVQVALDCSGRPHLSYSLSIPSQKIGSYDTELVKEFFVAVVNNSGLTLHIRQLDGVNSHHIVEACFKAF 171          

HSP 2 Score: 35.4242 bits (80), Expect = 9.668e-62
Identity = 16/26 (61.54%), Postives = 20/26 (76.92%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K F+RALR AT++ PRR G IP+ KG
Sbjct:  169 KAFSRALRMATEIDPRRAGAIPSSKG 194          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_SYNSC (Imidazoleglycerol-phosphate dehydratase OS=Synechococcus sp. (strain CC9605) GN=hisB PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.261e-61
Identity = 104/169 (61.54%), Postives = 134/169 (79.29%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R G + RVT ET+V V++++DGSG   +ST +PFLDHML Q++SHGL D+ + A GD HIDDHHTNEDVG+A+G AL QALGDR+GI+RFG F APLDEAL+ V+LD SGRPHL+Y L IP+Q++GTY+T+LV+  F ++VN SG+   I+QL G NS HI+EA  KAF
Sbjct:    3 RQGTIHRVTGETDVKVRLDLDGSGQCQASTGVPFLDHMLHQISSHGLIDLEINAVGDTHIDDHHTNEDVGIAVGQALAQALGDRRGIHRFGHFVAPLDEALVQVALDCSGRPHLSYSLAIPSQRIGTYDTELVKEFFVAVVNNSGLTLHIRQLDGVNSHHIVEACFKAF 171          

HSP 2 Score: 36.1946 bits (82), Expect = 1.261e-61
Identity = 17/26 (65.38%), Postives = 20/26 (76.92%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K FARALR AT++ PRR G IP+ KG
Sbjct:  169 KAFARALRMATEVDPRRAGAIPSSKG 194          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_THEEB (Imidazoleglycerol-phosphate dehydratase OS=Thermosynechococcus elongatus (strain BP-1) GN=hisB PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.643e-61
Identity = 112/169 (66.27%), Postives = 133/169 (78.70%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R   V R TKET V V++ +DG+G+AD+ T IPFL+HMLDQL +HGL D+ V+A+GD HIDDHHTNEDVG+ +G AL QALGDR+GI RFG F APLDE+L+ V+LD SGRPHLNY LQIPTQ+VGTY+TQLV   F +LVN S M   I+QL G NS HIIEAT KAF
Sbjct:   15 RQATVDRQTKETKVHVELTLDGNGLADNHTGIPFLNHMLDQLCAHGLVDLRVQASGDTHIDDHHTNEDVGITLGMALDQALGDRRGIQRFGHFVAPLDESLVEVALDFSGRPHLNYGLQIPTQRVGTYDTQLVREFFVALVNHSRMTLHIRQLDGMNSHHIIEATFKAF 183          

HSP 2 Score: 31.9574 bits (71), Expect = 1.643e-61
Identity = 16/26 (61.54%), Postives = 17/26 (65.38%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K FARALR A  L PRR   IP+ KG
Sbjct:  181 KAFARALRMAIALDPRRAQQIPSSKG 206          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_ANASP (Imidazoleglycerol-phosphate dehydratase OS=Anabaena sp. (strain PCC 7120) GN=hisB PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 8.072e-61
Identity = 110/169 (65.09%), Postives = 133/169 (78.70%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            RI  V R+T ETNV V +N+DG+G+  ++T IPFLDHML Q++SHGL D+ V+A GD  IDDHHTNEDVG+ +G AL +ALGDRKGI RFG+F APLDEAL+ V+LD SGRPHL+Y LQIPT++VGTY+TQLV   F +LVN S M   I+QL G NS HIIEAT KAF
Sbjct:   16 RIASVHRITGETNVQVTVNLDGTGICKAATGIPFLDHMLHQISSHGLIDLDVQAKGDWEIDDHHTNEDVGITLGQALAKALGDRKGIVRFGNFLAPLDEALVQVALDFSGRPHLSYGLQIPTERVGTYDTQLVREFFVALVNHSQMTLHIRQLDGINSHHIIEATFKAF 184          

HSP 2 Score: 32.7278 bits (73), Expect = 8.072e-61
Identity = 15/26 (57.69%), Postives = 18/26 (69.23%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K FARA R A ++ PRR G IP+ KG
Sbjct:  182 KAFARAARMAIEVDPRRAGTIPSSKG 207          
The following BLAST results are available for this feature:
BLAST of DY259991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HIS7_PEA5.775e-8375.59Imidazoleglycerol-phosphate dehydratase OS=Pisum s... [more]
HIS7B_ARATH1.680e-8272.25Imidazoleglycerol-phosphate dehydratase 2 OS=Arabi... [more]
HIS7A_ARATH8.339e-8272.52Imidazoleglycerol-phosphate dehydratase 1 OS=Arabi... [more]
HIS7_WHEAT1.334e-7180.84Imidazoleglycerol-phosphate dehydratase (Fragment)... [more]
HIS7_SYNS92.565e-6262.72Imidazoleglycerol-phosphate dehydratase OS=Synecho... [more]
HIS7_SYNPW5.687e-6262.72Imidazoleglycerol-phosphate dehydratase OS=Synecho... [more]
HIS7_SYNPX9.668e-6261.54Imidazoleglycerol-phosphate dehydratase OS=Synecho... [more]
HIS7_SYNSC1.261e-6161.54Imidazoleglycerol-phosphate dehydratase OS=Synecho... [more]
HIS7_THEEB1.643e-6166.27Imidazoleglycerol-phosphate dehydratase OS=Thermos... [more]
HIS7_ANASP8.072e-6165.09Imidazoleglycerol-phosphate dehydratase OS=Anabaen... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YN21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259991 ID=DY259991; Name=DY259991; organism=Citrus clementina; type=EST; length=917bp
GCTGCGTTTTGGCATATAGCCGTGTTGGCGTTGCTACTCTCTCTGCGACA
TTGGAAACGATAGTGTGTAAAATGGAGCTCTCGGTCCCAGCTCGCCTTGT
TCACCTTTCAATCTCGTCCACGTCCTCACGCCGGCTCCTCGTTAAACCAA
AAACCAATCTCTCTCGTAAACTTCTCCCCATCTCCACACAATACTGCTCC
TCAACGCGCCGCATGAACTCCCTCACAACACCACGCGCCTCTCTAAACCC
AGACGGCGACAGCAAACACAACAACGGGTCCGCCTCAACTTCCTCTGCCG
TCGATTCTGGTCGAATTGGGGAAGTGAAAAGAGTCACGAAAGAGACCAAC
GTTTCTGTGAAGATTAACGTCGATGGCTCTGGCGTTGCTGATTCATCCAC
TTGCATTCCCTTCCTAGATCACATGCTTGATCAACTGGCTTCGCACGGGC
TATTTGATGTGCACGTGAGGGCAACCGGAGACATTCACATTGATGATCAT
CATACCAATGAAGACGTTGGGCTTGCCATTGGCACGGCATTGCTGCAAGC
TCTTGGTGATAGGAAAGGAATTAATCGGTTTGGTGATTTTACAGCTCCTC
TTGATGAAGCTTTGATTCATGTTTCATTGGATTTATCTGGACGGCCACAT
TTAAATTATGATTTGCAAATTCCCACACAGAAAGTTGGAACTTACAACAC
TCAATTGGTGGAACCACTTTTCCAATCCTTGGTGAACACTTCTGGGATGG
ACCCTTCCATTCAACAGCTTGCTGGAAAAAATTCCTCTCACATTATTGAG
GCAACCCTCAAAGCTTTTTGCTAGGGCTCTCCGAAAAGCAACAAAATTAG
GACCCCGTCGCCGTGGAAATATACCCAACCTCAAAGGGGGTTCTCCAACA
TCTTGGAATCTCGACGG
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