DY259995

Overview
NameDY259995
Unique NameDY259995
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length998
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig190 contig Ccv1_Contig190:173..1170. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259995 vs. ExPASy Swiss-Prot
Match: RFS1_ARATH (Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana GN=RFS1 PE=2 SV=1)

HSP 1 Score: 401.749 bits (1031), Expect = 3.328e-111
Identity = 185/234 (79.06%), Postives = 206/234 (88.03%), Query Frame = 3
Query:    3 SAVIMASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTPGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVVPVKELSSGTRFAPIGLVRMFHSG 704
            +AVI ASDDFWPRDPASHTIHIASVAYNT+FLGEFMQPDWDMFHSLHPMAEYH AARAVGGCAIYVSDKPGQHDFNLLRKLVL DGSILRAKLPGRPT DC FSDP RD KSLLKIWNLN+FTGV+GVFNCQGAGWC+  K+ LIHD++PGT  G +R  DV YL +VA  EWTGD+I YSHL GE+ YLPK+ +LP+TL  REYEV+TVVPVKE S G++FAP+GL+ MF+SG
Sbjct:  445 TAVIRASDDFWPRDPASHTIHIASVAYNTLFLGEFMQPDWDMFHSLHPMAEYHAAARAVGGCAIYVSDKPGQHDFNLLRKLVLRDGSILRAKLPGRPTSDCFFSDPVRDNKSLLKIWNLNEFTGVIGVFNCQGAGWCKNEKRYLIHDQEPGTISGCVRTNDVHYLHKVAAFEWTGDSIVYSHLRGELVYLPKDTSLPVTLMPREYEVFTVVPVKEFSDGSKFAPVGLMEMFNSG 678          
BLAST of DY259995 vs. ExPASy Swiss-Prot
Match: RFS2_ARATH (Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 PE=2 SV=2)

HSP 1 Score: 371.318 bits (952), Expect = 4.817e-102
Identity = 169/233 (72.53%), Postives = 200/233 (85.84%), Query Frame = 3
Query:    3 SAVIMASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTPGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVVPVKELSSGTRFAPIGLVRMFHS 701
            +A++ ASDDF+PRDPASHTIHIASVAYN++FLGEFMQPDWDMFHSLHP AEYH AARAVGGCAIYVSDKPG H+F+LLRKLVLPDGS+LRAKLPGRPTRDCLF+DPARDG SLLKIWN+N FTG+VGVFNCQGAGWC+  KKN IHD  PGT  G IRA D D + +VAG++W+GD+I Y++  GEV  LPK A++P+TLK  EYE++ + P+KE++    FAPIGLV MF+S
Sbjct:  441 TAIVRASDDFYPRDPASHTIHIASVAYNSLFLGEFMQPDWDMFHSLHPTAEYHAAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAKLPGRPTRDCLFADPARDGISLLKIWNMNKFTGIVGVFNCQGAGWCKETKKNQIHDTSPGTLTGSIRADDADLISQVAGEDWSGDSIVYAYRSGEVVRLPKGASIPLTLKVLEYELFHISPLKEITENISFAPIGLVDMFNS 673          
BLAST of DY259995 vs. ExPASy Swiss-Prot
Match: RFS6_ARATH (Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana GN=RFS6 PE=2 SV=2)

HSP 1 Score: 322.013 bits (824), Expect = 3.352e-87
Identity = 148/236 (62.71%), Postives = 182/236 (77.12%), Query Frame = 3
Query:    3 SAVIMASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTPGFIRAKDVDYLPRVAGD--EWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVVPVKELSSGTRFAPIGLVRMFHSG 704
            +AVI ASDDF+PRDP SHTIHIASVAYN++FLGEFMQPDWDMFHS+HP AEYH +ARA+ G  +YVSD PG+H+F LLRKLVLPDGSILRA+LPGRPTRDCLF+DPARDG SLLKIWN+N +TGV+GV+NCQGA W    +KN+ H  +  +  G IR +DV  +   + D   W GD   YS   GE+  +P N +LP++LK RE+E++TV P+  L  G  FAPIGLV M++SG
Sbjct:  439 AAVIRASDDFYPRDPVSHTIHIASVAYNSVFLGEFMQPDWDMFHSVHPAAEYHASARAISGGPLYVSDSPGKHNFELLRKLVLPDGSILRARLPGRPTRDCLFADPARDGVSLLKIWNMNKYTGVLGVYNCQGAAWSSTERKNIFHQTKTDSLTGSIRGRDVHSISEASTDPTTWNGDCAVYSQSRGELIVMPYNVSLPVSLKIREHEIFTVSPISHLVDGVSFAPIGLVNMYNSG 674          
BLAST of DY259995 vs. ExPASy Swiss-Prot
Match: RFS5_ARATH (Probable galactinol--sucrose galactosyltransferase 5 OS=Arabidopsis thaliana GN=RFS5 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 8.623e-51
Identity = 107/246 (43.50%), Postives = 146/246 (59.35%), Query Frame = 3
Query:   24 DDFWPRDPASHT--------IHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTPGFIRAKDVDYLPRVAGDEWTGDA--IAYSHLGGEVAYLPK---------NATLPITLKSREYEVYTVVPVKEL-SSGTRFAPIGLVRMFHS 701
            DDFW  DP+            H+   AYN++++G F+QPDWDMF S HP AE+H A+RA+ G  IY+SD  G+HDF+LL++LVLP+GSILR +    PTRD LF DP  DGK++LKIWNLN +TGV+G FNCQG GWCR  ++N    E   T       KDV         EW   +  I+ +++     +L +         N  L +TL+  ++E+ TV PV  +  +  RFAPIGLV M ++
Sbjct:  477 DDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIQPDWDMFQSTHPCAEFHAASRAISGGPIYISDCVGKHDFDLLKRLVLPNGSILRCEYYALPTRDRLFEDPLHDGKTMLKIWNLNKYTGVIGAFNCQGGGWCRETRRNQCFSECVNTLTATTSPKDV---------EWNSGSSPISIANVEEFALFLSQSKKLLLSGLNDDLELTLEPFKFELITVSPVVTIEGNSVRFAPIGLVNMLNT 713          
BLAST of DY259995 vs. ExPASy Swiss-Prot
Match: RFS_ORYSJ (Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica GN=RFS PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 2.124e-49
Identity = 106/244 (43.44%), Postives = 144/244 (59.02%), Query Frame = 3
Query:   24 DDFWPRDPASHT--------IHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTPGFIRAKDVDYLPRVAGDEWT-----GDAIA-YSHLGGEVAYLPKNATLPITLKSREYEVYTVVPVKELSS---GTRFAPIGLVRMFHSG 704
            DDFW  DP+            H+   AYN++++G F+ PDWDMF S HP A +H A+RAV G  +YVSD  G HDF+LLR+L LPDG+ILR +    PTRDCLF+DP  DGK++LKIWN+N F+GV+G FNCQG GW R  ++N+       + P   RA   D        EW+     GD  A Y     ++  L ++ ++ +TL+   YE+  V PV+ + S   G  FAPIGL  M ++G
Sbjct:  475 DDFWCTDPSGDPDGTFWLQGCHMVHCAYNSLWMGAFIHPDWDMFQSTHPCAAFHAASRAVSGGPVYVSDAVGCHDFDLLRRLALPDGTILRCERYALPTRDCLFADPLHDGKTMLKIWNVNKFSGVLGAFNCQGGGWSREARRNMC--AAGFSVPVTARASPADV-------EWSHGGGGGDRFAVYFVEARKLQLLRRDESVELTLEPFTYELLVVAPVRAIVSPELGIGFAPIGLANMLNAG 709          
BLAST of DY259995 vs. ExPASy Swiss-Prot
Match: RFS_PEA (Galactinol--sucrose galactosyltransferase OS=Pisum sativum GN=RFS PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 6.832e-48
Identity = 100/238 (42.02%), Postives = 141/238 (59.24%), Query Frame = 3
Query:   24 DDFWPRDPASHT--------IHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTPGFIRAKDVDYLPRVAGDEWTG-DAIA-YSHLGGEVAYLPKNATLPITLKSREYEVYTVVPVKELSSG-TRFAPIGLVRMFHSG 704
            DDFW  DP+            H+   AYN++++G F+ PDWDMF S HP AE+H A+RA+ G  +YVSD  G H+F LL+  VLPDGSILR +    PTRDCLF DP  +GK++LKIWNLN + GV+G+FNCQG GWC   ++N    E       +   +D+++       +  G D  A Y     +++ +  +  L ++L+   +E+ TV P+K  S    +FAPIGLV M +SG
Sbjct:  490 DDFWCCDPSGDPNGTYWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPVYVSDCVGNHNFKLLKSFVLPDGSILRCQHYALPTRDCLFEDPLHNGKTMLKIWNLNKYAGVLGLFNCQGGGWCPETRRNKSASEFSHAVTCYASPEDIEWCNGKTPMDIKGVDVFAVYFFKEKKLSLMKCSDRLEVSLEPFSFELMTVSPLKVFSKRLIQFAPIGLVNMLNSG 727          
BLAST of DY259995 vs. ExPASy Swiss-Prot
Match: STSYN_PEA (Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 4.145e-45
Identity = 93/238 (39.08%), Postives = 140/238 (58.82%), Query Frame = 3
Query:   24 DDFWPRDPASHT--------IHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTPGFIRAKDVDYLPRVAGDEW--TGDAIAYSHLGGEVAYLP-KNATLPITLKSREYEVYTVVPVKELSSGTRFAPIGLVRMFHSG 704
            DDFW +DP            +H+   +YN++++G+ +QPDWDMF S H  A++H  +RA+ G  IYVSD  G HDF+L++KLV PDG+I +      PTRDCLF +P  D  ++LKIWN N + GV+G FNCQGAGW  + +K     E     PG +   +V++  +          + + Y +   E++ +  K+  +  T++   +E+Y+ VPV +L  G +FAPIGL  MF+SG
Sbjct:  545 DDFWFQDPNGDPMGSFWLQGVHMIHCSYNSLWMGQMIQPDWDMFQSDHVCAKFHAGSRAICGGPIYVSDNVGSHDFDLIKKLVFPDGTIPKCIYFPLPTRDCLFKNPLFDHTTVLKIWNFNKYGGVIGAFNCQGAGWDPIMQKFRGFPECYKPIPGTVHVTEVEWDQKEETSHLGKAEEYVVYLNQAEELSLMTLKSEPIQFTIQPSTFELYSFVPVTKLCGGIKFAPIGLTNMFNSG 782          
BLAST of DY259995 vs. ExPASy Swiss-Prot
Match: RFS4_ARATH (Probable galactinol--sucrose galactosyltransferase 4 OS=Arabidopsis thaliana GN=RFS4 PE=2 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 2.057e-44
Identity = 99/241 (41.08%), Postives = 143/241 (59.34%), Query Frame = 3
Query:   24 DDFWPRDPASHT--------IHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQ--HDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTPGFIRAKDV--DYLPRVAGDE--WTGDAIAYSHLGGEVAYL-PKNATLPITLKSREYEVYTVVPVKEL-SSGTRFAPIGLVRMFH 698
            DDFW +DP            +H+   +YN+I++G+ +QPDWDMF S H  AEYH A+RA+ G  +Y+SD  G+  H+F+L++KL   DG+I R      PTRD LF +P  D +S+LKI+N N F GV+G FNCQGAGW     +   + E   T  G +   D+  D  P  AG +  +TGD + Y     E+ ++  K+  + ITL+   +++ + VPV EL SSG RF P+GL+ MF+
Sbjct:  561 DDFWWQDPYGDPQGVYWLQGVHMIHCSYNSIWMGQMIQPDWDMFQSDHVCAEYHAASRAICGGPVYLSDHLGKASHNFDLIKKLAFFDGTIPRCVHYALPTRDSLFKNPLFDKESILKIFNFNKFGGVIGTFNCQGAGWSPEEHRFKGYKECYTTVSGTVHVSDIEWDQNPEAAGSQVTYTGDYLVYKQQSEEILFMNSKSEAMKITLEPSAFDLLSFVPVTELVSSGVRFVPLGLINMFN 801          
BLAST of DY259995 vs. ExPASy Swiss-Prot
Match: AGAL_SULSO (Alpha-galactosidase OS=Sulfolobus solfataricus GN=galS PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.453e-13
Identity = 45/117 (38.46%), Postives = 64/117 (54.70%), Query Frame = 3
Query:    3 SAVIMASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDK-PGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKI 350
            S V+  S D+ P       +HI   AYN++     + PD+DMF S  P A+ H  AR   G  IY++D+ P + +  LLR  VLP+G ++R   P   T D LF DP R+ + LLK+
Sbjct:  417 SNVMRNSIDYVPFWKDGTKLHIMFNAYNSLLTSHIVYPDYDMFMSYDPYAKVHLVARVFSGGPIYITDRHPERTNIELLRMAVLPNGEVIRVDEPALITEDLLFKDPLRE-RVLLKL 532          
The following BLAST results are available for this feature:
BLAST of DY259995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
RFS1_ARATH3.328e-11179.06Probable galactinol--sucrose galactosyltransferase... [more]
RFS2_ARATH4.817e-10272.53Probable galactinol--sucrose galactosyltransferase... [more]
RFS6_ARATH3.352e-8762.71Probable galactinol--sucrose galactosyltransferase... [more]
RFS5_ARATH8.623e-5143.50Probable galactinol--sucrose galactosyltransferase... [more]
RFS_ORYSJ2.124e-4943.44Galactinol--sucrose galactosyltransferase OS=Oryza... [more]
RFS_PEA6.832e-4842.02Galactinol--sucrose galactosyltransferase OS=Pisum... [more]
STSYN_PEA4.145e-4539.08Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 S... [more]
RFS4_ARATH2.057e-4441.08Probable galactinol--sucrose galactosyltransferase... [more]
AGAL_SULSO2.453e-1338.46Alpha-galactosidase OS=Sulfolobus solfataricus GN=... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP10YO02FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259995 ID=DY259995; Name=DY259995; organism=Citrus clementina; type=EST; length=998bp
GATCAGCTGTTATAATGGCCTCAGATGATTTCTGGCCAAGAGATCCAGCA
TCACACACAATTCACATTGCATCAGTTGCATACAACACCATTTTCCTTGG
TGAATTTATGCAGCCAGATTGGGATATGTTTCATAGTCTACACCCAATGG
CTGAATACCATGGAGCTGCTCGTGCAGTGGGAGGATGTGCCATTTATGTC
AGTGACAAGCCAGGACAACATGACTTTAACCTACTGAGGAAGCTTGTACT
TCCTGATGGTTCCATACTGAGAGCCAAACTTCCTGGAAGGCCAACAAGAG
ATTGCTTGTTCTCTGATCCTGCTAGAGATGGAAAAAGTCTTTTAAAGATA
TGGAATCTGAATGATTTCACTGGAGTCGTGGGGGTCTTTAACTGCCAGGG
AGCTGGATGGTGCAGAGTTGGAAAGAAGAACCTTATTCATGATGAACAAC
CTGGCACAACACCTGGGTTTATTAGGGCAAAAGATGTTGATTATCTGCCA
AGAGTTGCTGGTGATGAATGGACTGGTGATGCTATCGCATATTCTCATCT
TGGTGGAGAGGTAGCTTATCTTCCAAAGAATGCAACTCTGCCAATAACAC
TGAAGTCGAGAGAATATGAAGTTTATACTGTAGTGCCTGTGAAGGAGTTG
TCCAGTGGGACCAGATTTGCCCCCATTGGTCTTGTCAGAATGTTCCATTC
CGGGAGGAACTATTAAAGAGTTGAAATATGAATCCGAAGGGGACTGCCAC
TGTCCACACTGAAGTTCCTTGGACGTTGGCGAAATTTGGAGCCTAATTCC
CTCCACCCCGACCCAGGAAAAAAGCATTTGATTCCAAAGAAATGCGCATT
GGGAAAAAAAAAACAACCCTGGTTCGGGAAACCTCCCCCCTTCGAAAGTT
CCCCAACGGAAAAAATTGGAACCTCTCAGAAATCACCTCACTTGAGACCT
GTATGGCCCTCAAACTCTTTCTCCCCCCTCCTCCCCATAATCTCTTCA
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