DY260133

Overview
NameDY260133
Unique NameDY260133
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length629
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1426 contig Ccv1_Contig1426:1..630. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY260133 vs. ExPASy Swiss-Prot
Match: VA722_ARATH (Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana GN=VAMP722 PE=2 SV=2)

HSP 1 Score: 248.054 bits (632), Expect = 2.834e-65
Identity = 123/161 (76.40%), Postives = 133/161 (82.61%), Query Frame = 1
Query:    1 LVDDPFTYCVVAVESVGRQVPIAFLERVNYDFTKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMXXXXXXXXXXXXXXXXXXXSVCGGFN 483
            LV++ FTYCVVAV+S GRQ+P+AFLERV  DF KRYGGGKAATA AN LNKEFG KLKEHMQYC+DHP+EISKLAKVKAQVSEVKGVMM+NIEKVLDRGEKIELLVD+TENLRSQAQDFR QGTQMRRKMWFQNM                   S+CGGFN
Sbjct:   58 LVENGFTYCVVAVDSAGRQIPMAFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTQMRRKMWFQNMKIKLIVLAIIIALILIIILSICGGFN 218          
BLAST of DY260133 vs. ExPASy Swiss-Prot
Match: VA725_ARATH (Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana GN=VAMP725 PE=2 SV=2)

HSP 1 Score: 241.506 bits (615), Expect = 2.653e-63
Identity = 119/160 (74.38%), Postives = 132/160 (82.50%), Query Frame = 1
Query:    1 LVDDPFTYCVVAVESVGRQVPIAFLERVNYDFTKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMXXXXXXXXXXXXXXXXXXXSVCGGF 480
            LV++ FTYCVVAVESVGRQ+P+AFLERV  DF KRYGGGKA TA AN LN+EFG KLKEHMQYC+DHP+EISKLAKVKAQV+EVKGVMM+NIEKVLDRGEKIELLVD+TENLRSQAQDFR QGT++RRKMWF+NM                   SVCGGF
Sbjct:  123 LVENGFTYCVVAVESVGRQIPMAFLERVKEDFNKRYGGGKATTAQANSLNREFGSKLKEHMQYCVDHPDEISKLAKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKIRRKMWFENMKIKLIVLGIIITLILIIILSVCGGF 282          
BLAST of DY260133 vs. ExPASy Swiss-Prot
Match: VA721_ARATH (Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana GN=VAMP721 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.317e-62
Identity = 120/160 (75.00%), Postives = 129/160 (80.62%), Query Frame = 1
Query:    1 LVDDPFTYCVVAVESVGRQVPIAFLERVNYDFTKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMXXXXXXXXXXXXXXXXXXXSVCGGF 480
            LV+D FTYCVVAV+S GRQ+P++FLERV  DF KRYGGGKAATA AN LNKEFG KLKEHMQYC+DHP+EISKLAKVKAQVSEVKGVMM+NIEKVLDRGEKIELLVD+TENLRSQAQDFR  GTQMRRKMW QNM                   SVC GF
Sbjct:   58 LVEDGFTYCVVAVDSAGRQIPMSFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTTGTQMRRKMWLQNMKIKLIVLAIIIALILIIVLSVCHGF 217          
BLAST of DY260133 vs. ExPASy Swiss-Prot
Match: VA726_ARATH (Putative vesicle-associated membrane protein 726 OS=Arabidopsis thaliana GN=VAMP726 PE=2 SV=2)

HSP 1 Score: 234.187 bits (596), Expect = 4.235e-61
Identity = 115/160 (71.88%), Postives = 128/160 (80.00%), Query Frame = 1
Query:    1 LVDDPFTYCVVAVESVGRQVPIAFLERVNYDFTKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMXXXXXXXXXXXXXXXXXXXSVCGGF 480
            L D+ FTYCVV +ES GRQ+P+AFLERV  DF KRYGGGKA+TA AN LNKEFG KLKEHMQYC DHPEEISKL+KVKAQV+EVKGVMM+NIEKVLDRGEKIELLVD+TENLRSQAQDFR QGT+M+RK+WF+NM                   SVC GF
Sbjct:   58 LADNGFTYCVVVIESAGRQIPMAFLERVKEDFNKRYGGGKASTAKANSLNKEFGSKLKEHMQYCADHPEEISKLSKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKMKRKLWFENMKIKLIVFGIIVALILIIILSVCHGF 217          
BLAST of DY260133 vs. ExPASy Swiss-Prot
Match: VA724_ARATH (Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana GN=VAMP724 PE=2 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 1.783e-51
Identity = 95/161 (59.01%), Postives = 120/161 (74.53%), Query Frame = 1
Query:    1 LVDDPFTYCVVAVESVGRQVPIAFLERVNYDFTKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMXXXXXXXXXXXXXXXXXXXSVCGGFN 483
            LV+D + YCVVA +S+ +Q+ IAFLERV  DF KRYGGGKA+TA+A  LNKEFGP +KEHM Y +DH EEI KL KVKAQVSEVK +M++NI+K +DRGE + +L D+TENLRSQAQ++++QGTQ+RRK+W+QNM                   SVC GFN
Sbjct:   59 LVEDGYAYCVVAKDSLSKQISIAFLERVKADFKKRYGGGKASTAIAKSLNKEFGPVMKEHMNYIVDHAEEIEKLIKVKAQVSEVKSIMLENIDKAIDRGENLTVLTDKTENLRSQAQEYKKQGTQVRRKLWYQNMKIKLVVLGILLLLVLIIWISVCHGFN 219          
BLAST of DY260133 vs. ExPASy Swiss-Prot
Match: VA723_ARATH (Vesicle-associated membrane protein 723 OS=Arabidopsis thaliana GN=VAMP723 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.120e-45
Identity = 97/161 (60.25%), Postives = 111/161 (68.94%), Query Frame = 1
Query:    1 LVDDPFTYCVVAVESVGRQVPIAFLERVNYDFTKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMXXXXXXXXXXXXXXXXXXXSVCGGFN 483
            LV++ FTYCVVAV+S GR++P+AFLERV  DF KRYGG KAAT  AN LNKEFG  LKEHMQYC+DHP+EIS LAK KAQVSEVK +MM+NIEKVL RG   E+L     +  SQ Q F  + TQM+RK WFQNM                   SVCGGFN
Sbjct:   58 LVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEML----GSSESQPQAFYIKRTQMKRKKWFQNMKIKLIVLAIIIALILIIILSVCGGFN 214          
BLAST of DY260133 vs. ExPASy Swiss-Prot
Match: VA727_ARATH (Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana GN=VAMP727 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.982e-43
Identity = 93/179 (51.96%), Postives = 112/179 (62.57%), Query Frame = 1
Query:    1 LVDDPFTYCVVAVESVGRQVPIAFLERVNYDFTKRYGGG-------------------KAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMXXXXXXXXXXXXXXXXXXXSVCGGF 480
            LVD+ F + VVA ES GR VP  FLERV  DF KRY                          +VA  L++EFGP LKEHMQYC+ HPEE+SKL+K+KAQ++EVKG+MMDNIEKVLDRGEKIELLVD+TENL+ QA  F++QG Q+RRKMW Q++                     CGGF
Sbjct:   58 LVDNGFVFLVVADESTGRSVPFVFLERVKEDFKKRYEASIKNDERHPLADEDEDDDLFGDRFSVAYNLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIELLVDKTENLQFQADSFQRQGRQLRRKMWLQSLQMKLMVAGAVFSFILIVWVVACGGF 236          
BLAST of DY260133 vs. ExPASy Swiss-Prot
Match: VA711_ARATH (Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana GN=VAMP711 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 6.610e-22
Identity = 50/131 (38.17%), Postives = 85/131 (64.89%), Query Frame = 1
Query:   10 DPFTYCVVAVESVGRQVPIAFLERVNYDFTKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQN 402
            D  T   +A E+ GR++P AFLE ++  F + YG     TA+A  +N+EF   L + + Y  + P    ++ ++K ++++V+GVM++NI+KVLDRGE++ELLVD+T N++     FR+Q  + R  +W++N
Sbjct:   59 DGLTVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRA-VHTALAYAMNEEFSRVLSQQIDYYSNDPNA-DRINRIKGEMNQVRGVMIENIDKVLDRGERLELLVDKTANMQGNTFRFRKQARRFRSNVWWRN 187          
BLAST of DY260133 vs. ExPASy Swiss-Prot
Match: VA714_ARATH (Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana GN=VAMP714 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.633e-22
Identity = 54/159 (33.96%), Postives = 90/159 (56.60%), Query Frame = 1
Query:    1 LVDDPFTYCVVAVESVGRQVPIAFLERVNYDFTKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMXXXXXXXXXXXXXXXXXXXSVCGG 477
            L  D  T+  +A ++ GR+VP ++LE ++  F K YG   A  A A  +N EF   L + M++   +P  +  L +V+ +VSE++ VM++NIEK+++RG++IELLVD+T  ++  +  FR+Q  ++RR +W +N                    S CGG
Sbjct:   57 LRSDGLTFLCMANDTFGRRVPFSYLEEIHMRFMKNYGK-VAHNAPAYAMNDEFSRVLHQQMEFFSSNPS-VDTLNRVRGEVSEIRSVMVENIEKIMERGDRIELLVDKTATMQDSSFHFRKQSKRLRRALWMKNAKLLVLLTCLIVFLLYIIIASFCGG 213          
BLAST of DY260133 vs. ExPASy Swiss-Prot
Match: VA713_ARATH (Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana GN=VAMP713 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.473e-21
Identity = 51/132 (38.64%), Postives = 85/132 (64.39%), Query Frame = 1
Query:   10 DPFTYCVVAVESVGRQVPIAFLERVNYDFTKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNM 405
            D  T   +A E+ GR +P AFL+ ++  F K YG     +A A  +N EF   L + M++  + P    +++++K ++S+V+ VM++NI+KVLDRGE++ELLVD+TEN++     FR+Q  + R  MW++N+
Sbjct:   60 DGLTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRA-IHSAQAYSMNDEFSRVLSQQMEFYSNDPNA-DRMSRIKGEMSQVRNVMIENIDKVLDRGERLELLVDKTENMQGNTFRFRKQARRYRTIMWWRNV 189          
The following BLAST results are available for this feature:
BLAST of DY260133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
VA722_ARATH2.834e-6576.40Vesicle-associated membrane protein 722 OS=Arabido... [more]
VA725_ARATH2.653e-6374.38Vesicle-associated membrane protein 725 OS=Arabido... [more]
VA721_ARATH1.317e-6275.00Vesicle-associated membrane protein 721 OS=Arabido... [more]
VA726_ARATH4.235e-6171.88Putative vesicle-associated membrane protein 726 O... [more]
VA724_ARATH1.783e-5159.01Vesicle-associated membrane protein 724 OS=Arabido... [more]
VA723_ARATH1.120e-4560.25Vesicle-associated membrane protein 723 OS=Arabido... [more]
VA727_ARATH3.982e-4351.96Vesicle-associated membrane protein 727 OS=Arabido... [more]
VA711_ARATH6.610e-2238.17Vesicle-associated membrane protein 711 OS=Arabido... [more]
VA714_ARATH8.633e-2233.96Vesicle-associated membrane protein 714 OS=Arabido... [more]
VA713_ARATH1.473e-2138.64Vesicle-associated membrane protein 713 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YG18FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260133 ID=DY260133; Name=DY260133; organism=Citrus clementina; type=EST; length=629bp
CTCGTTGATGACCCTTTCACTTACTGTGTGGTTGCAGTTGAATCTGTTGG
TCGACAGGTTCCAATTGCCTTCCTTGAGCGTGTGAACTACGATTTTACAA
AGAGATATGGTGGAGGAAAAGCTGCAACAGCGGTCGCTAACGGCTTGAAC
AAGGAGTTTGGGCCCAAATTGAAGGAGCATATGCAGTACTGCATCGATCA
TCCAGAGGAGATCAGCAAGCTTGCTAAAGTGAAGGCTCAGGTGTCAGAAG
TCAAAGGTGTTATGATGGATAACATAGAGAAGGTTCTTGATCGTGGAGAG
AAAATTGAGCTTCTGGTGGATAGAACAGAGAATCTTCGCTCACAGGCGCA
GGATTTCAGACAGCAGGGAACCCAGATGAGGAGAAAGATGTGGTTTCAGA
ACATGAAGATCAAACTGATTGTTCTGGGAATCATAATTGCCTTGATTCTC
ATTATTGTATTATCTGTATGCGGTGGCTTCAATTGTTGATGATACCTTCG
TACTCTATTAGTATTGTTGCTGCTTGTCAACTGTTTCTTGATGTGTTTAC
TCGTAATTTTGTCCCGTTCCCACAAGACCAATGCTTGTAAAGTCTGTACT
TTTTGAATTGCTCTGATACCAAATTTCTT
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