DY260151

Overview
NameDY260151
Unique NameDY260151
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1011
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1433 contig Ccv1_Contig1433:1..1011. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY260151 vs. ExPASy Swiss-Prot
Match: PP384_ARATH (Pentatricopeptide repeat-containing protein At5g15280 OS=Arabidopsis thaliana GN=At5g15280 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 4.203e-61
Identity = 126/290 (43.45%), Postives = 171/290 (58.97%), Query Frame = 3
Query:    3 YLDLDRDEYERKLSKIIEDSMIPNFNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICYIFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCKEKSFQLPLKCWTPCGIKNWAPCLDVFCFFIPPLFPTGRTEKAVRL 872
            YL  D D YE++++ +++ S++P FNSLI      G+L+ AL L+DEM RWGQ+LS   F+ L++ LCASR+H++    LLEK PKLA +LD E+LN L+Q  CKKG  R  K IF  M+Q    I+N +YT+L+   CKK  + DL   W  AQN  WLP L DC  L  CL  K L++E +QLFE + +S P  +S+ C IF+EKL V GFS  AH++V+ L  +GC ++Q  Y+ LI+GLC EK              K   P L      IP L    +   A  L
Sbjct:  507 YLHTDLDAYEQRVNMVLDRSVLPEFNSLIVRASEDGDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNL 796          
BLAST of DY260151 vs. ExPASy Swiss-Prot
Match: PPR93_ARATH (Pentatricopeptide repeat-containing protein At1g62720 OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.486e-15
Identity = 56/224 (25.00%), Postives = 102/224 (45.54%), Query Frame = 3
Query:   72 NFNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICYIFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCKEK 743
            ++N +I  +        AL +V +M+++G E  +   S+L+ G C       A   L+ KM ++  + D    N +I   CK GLV D  ++FD M + G+  +  +Y +L+  LC  G   D          R  +P +    ++++    +    E+++L+E M   C           +  LC+ G    A  +++ ++ +GC  D + Y+ LI G CK K
Sbjct:  106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAID-LVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSK 328          

HSP 2 Score: 72.7886 bits (177), Expect = 3.608e-12
Identity = 59/242 (24.38%), Postives = 106/242 (43.80%), Query Frame = 3
Query:   33 RKLSKIIEDSMIPN---FNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICYIFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCKEKSF 749
            R +  ++   ++PN   F ++I +    G    A+ L +EM R   +  +  +++L+ GLC     +     +L+ M       D  + N LI   CK   V +G K+F  M QRGL  +  +Y T++    + G        +    +R   P +     L+  LC    ++++L LFE M  S   L      I +  +C  G   +A  L   L  +G   D ++Y+ +I G C+++ +
Sbjct:  230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM-HGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQW 467          
BLAST of DY260151 vs. ExPASy Swiss-Prot
Match: PP340_ARATH (Pentatricopeptide repeat-containing protein At4g28010 OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.486e-15
Identity = 64/235 (27.23%), Postives = 112/235 (47.66%), Query Frame = 3
Query:   39 LSKIIEDSMIPN---FNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICYIFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLC 734
            L ++  +S++P+   +N++I+       L+ AL L +EM   G   SL  +  L+   C +    +A  G L++M  +  + D      LI+  C  G +  GK +FD +L+RG +    +Y TL+   CK G +K+    ++    R   P +     L++ LC     KE+LQL   M+       +    I + KLC  G  ++A  +VE + ++    D + Y+ L+ GLC
Sbjct:  165 LREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM-GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398          
BLAST of DY260151 vs. ExPASy Swiss-Prot
Match: PP360_ARATH (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.553e-15
Identity = 59/237 (24.89%), Postives = 119/237 (50.21%), Query Frame = 3
Query:   36 KLSKIIEDSMIPNFNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICYIFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCKEKS 746
            K + +I D++I  +  LI+    +G +  A+ L +EM++ G  + +  ++ ++ GLC  R  +     L  +M + A   D  +L +LI   CK G +++  ++F  M ++ + ++  +Y TLL    K G I      W    +++ LP       LV  LC K  L E+ ++++ M+         IC   ++  C +G +S+  + +E+++ +G   D ++Y+ LI G  +E++
Sbjct:  402 KEAGLIPDNVI--YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLC-KRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREEN 635          

HSP 2 Score: 80.8777 bits (198), Expect = 1.325e-14
Identity = 54/222 (24.32%), Postives = 102/222 (45.95%), Query Frame = 3
Query:   78 NSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICYIFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCKEK 743
            N ++  +   G ++     + ++   G    +  ++ L+    +S+  ++    L+  MP         + N +I   CK G     K++F  ML+ GL+ ++ +Y +LLM  CKKG + +    +   ++R  +P L    S++        L ++L  F  +  +     + I  I ++  C  G  S A  L  E+LQQGC +D + Y+ ++ GLCK K
Sbjct:  239 NIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY-SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459          
BLAST of DY260151 vs. ExPASy Swiss-Prot
Match: PP156_ARATH (Pentatricopeptide repeat-containing protein At2g16880 OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.014e-14
Identity = 57/213 (26.76%), Postives = 103/213 (48.36%), Query Frame = 3
Query:  111 NLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKM-PKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICYIFLEKLCV-TGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCKEK 743
            ++ +A  + D+MV+ G  L++  F+ LV G C     ++   G+LE+M  +     D  + N +++A  KKG + D K++   M + GL     +Y  L+   CK G +K+     ++ +    LP L     L+  LC+   ++E L+L + M  S       + Y  L   C   G S  A  L+E++   G   +Q+ ++  ++ LCKE+
Sbjct:  184 SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLE-GKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAM-KSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEE 394          
BLAST of DY260151 vs. ExPASy Swiss-Prot
Match: PPR37_ARATH (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.325e-14
Identity = 64/245 (26.12%), Postives = 113/245 (46.12%), Query Frame = 3
Query:   21 DEYERKLSKIIEDSMIPN---FNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICYIFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCKEKS 746
            D+  + L  +I+  + P+   F++LI      G L+ A  L  EM++ G       +++L+ G C      KA   +L+ M       +  + N+LI   CK  L+ DG ++F  M  RG+  +  +Y TL+   C+ G ++     +    +R+  P +   K L++ LC     +++L++FE +  S   L   I  I +  +C      +A  L   L  +G   D   Y+ +I GLCK+ S
Sbjct:  299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA-NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542          

HSP 2 Score: 71.2478 bits (173), Expect = 1.050e-11
Identity = 53/220 (24.09%), Postives = 99/220 (45.00%), Query Frame = 3
Query:   78 NSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICYIFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCK 737
            N+L+  +   G +  A+LL+D MV  G + +   +  ++K +C S     A   LL KM +   KLD    +++I   CK G + +   +F+ M  +G   +   YTTL+   C  G   D          RK  P +    +L++C   +  L+E+ +L + M+       +      ++  C       A+ +++ ++ +GC  +   ++ LI G CK
Sbjct:  181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME-LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCK 399          

HSP 3 Score: 68.5514 bits (166), Expect = 6.803e-11
Identity = 53/237 (22.36%), Postives = 108/237 (45.57%), Query Frame = 3
Query:   39 LSKIIEDSMIPN---FNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICYIFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCKE 740
            + KII+    P+   F++LI  +   G +  AL LVD MV  G + +L   +ALV GLC +   +     L+++M +   + ++ +   +++  CK G      ++   M +R + ++   Y+ ++  LCK G + +    ++  + + +   +    +L+   C+     +  +L   M+              ++     G    A  L +E++Q+G + D + Y+ LI G CKE
Sbjct:  130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLN-GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365          
BLAST of DY260151 vs. ExPASy Swiss-Prot
Match: PPR39_ARATH (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.730e-14
Identity = 62/245 (25.31%), Postives = 114/245 (46.53%), Query Frame = 3
Query:   21 DEYERKLSKIIEDSMIPN---FNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICYIFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCKEKS 746
            D+  + L  +I+  + PN   F+ LI      G L+ A  L+ EM++ G   +   +++L+ G C   + ++    +++ M       D  + N+LI   CK   + DG ++F  M  RG+     +Y TL+   C+ G ++     +    +R+  P +   K L++ LC    L+++L++F  +  S   L   I  I +  +C      +A  L   L  +G  LD  AY+ +I  LC++ S
Sbjct:  315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC-KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDS 558          

HSP 2 Score: 70.0922 bits (170), Expect = 2.338e-11
Identity = 59/238 (24.79%), Postives = 111/238 (46.64%), Query Frame = 3
Query:   24 EYERKLSKIIEDSMIPN---FNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFI-KDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICYIFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIR 725
            E ++ L ++++  + PN   +NSLI        L+ A+ +VD M+  G +  +  F+ L+ G C + + I     L  +M       +  + N L+Q  C+ G +   KK+F  M+ R +  +  SY  LL  LC  G + K L  F  I +++  L  +     ++  +C+   + ++  LF  + +    L +    I + +LC     S A  L  ++ ++G   D++ Y+ LIR
Sbjct:  351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA-NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD-IGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIR 586          

HSP 3 Score: 69.707 bits (169), Expect = 3.054e-11
Identity = 53/220 (24.09%), Postives = 97/220 (44.09%), Query Frame = 3
Query:   78 NSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICYIFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCK 737
            N+L+  +   G +  A++L+D MV  G + +   +  ++  +C S     A   LL KM +   KLD    +++I   CK G + +   +F+ M  +G   +  +Y TL+   C  G   D          RK  P +     L++    +  L+E+ QL + M+       +      ++  C       A  +V+ ++ +GC+ D M ++ LI G CK
Sbjct:  197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME-LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCK 415          
BLAST of DY260151 vs. ExPASy Swiss-Prot
Match: PP247_ARATH (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.730e-14
Identity = 62/245 (25.31%), Postives = 113/245 (46.12%), Query Frame = 3
Query:   21 DEYERKLSKIIEDSMIPN---FNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICYIFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCKEKS 746
            D+  + L ++I  ++IP+   F++LI +    G L  A  L +EM+  G       +++L+ G C     +     + + M     + D  + ++LI + CK   V DG ++F  +  +GL     +Y TL++  C+ G +      +    +R   P +     L++ LC    L ++L++FE M  S   L   I  I +  +C      +A +L   L  +G   D + Y+ +I GLCK+ S
Sbjct:  297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC-LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540          
BLAST of DY260151 vs. ExPASy Swiss-Prot
Match: PPR38_ARATH (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.260e-14
Identity = 62/239 (25.94%), Postives = 110/239 (46.03%), Query Frame = 3
Query:   39 LSKIIEDSMIPN---FNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICYIFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCKEKS 746
            L  ++   ++PN   FN L+ +    G L+ A  L  EM+  G   ++  ++ L+ G C  ++ +     +L+ M +     D  +   LI+  C    V DG K+F  + +RGL     +Y+ L+   C+ G IK     +    +   LP +     L++ LC    L+++L++FE +  S   L   +    +E +C  G   +A  L   L  +G   + M Y+ +I GLCK+ S
Sbjct:  286 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM-QNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 523          

HSP 2 Score: 78.5666 bits (192), Expect = 6.574e-14
Identity = 55/236 (23.31%), Postives = 111/236 (47.03%), Query Frame = 3
Query:   36 KLSKIIEDSMIPNFNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICYIFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCKEK 743
            K+ K+  +     FN+LIK +   G +  A++LVD MV  G +  +  ++++V G+C S         LL KM +   K D  + + +I + C+ G +     +F  M  +G+     +Y +L+  LCK G   D         +R+ +P +     L++    +  L+E+ +L++ M+              ++  C+    S A+ +++ +++  C+ D + ++ LI+G C  K
Sbjct:  148 KVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS-GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK 382          

HSP 3 Score: 72.0182 bits (175), Expect = 6.154e-12
Identity = 57/253 (22.53%), Postives = 115/253 (45.45%), Query Frame = 3
Query:    6 LDLDRDEYERKLSKIIEDSMIPNFNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICYIFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCKEKSFQLPLK 764
            LDL R   ER +      + +  ++++I  +   G + AA+ L  EM   G + S+  +++LV+GLC +         LL+ M       +  + N+L+    K+G +++  +++  M+ RG++    +Y TL+   C +  + + +   D+    K  P +    SL++  C  K + + +++F  +        +    I ++  C +G    A  L +E++  G   D M Y  L+ GLC     +  L+
Sbjct:  213 LDLLRKMEERNVK-----ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL-LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE 459          
BLAST of DY260151 vs. ExPASy Swiss-Prot
Match: PP281_ARATH (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.260e-14
Identity = 59/271 (21.77%), Postives = 118/271 (43.54%), Query Frame = 3
Query:   66 IPNFNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGML-QRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICY-IFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCKEKSFQLPLKCWTPCGIKNWAPCLDVFCFFIPPLFPTGRTEKAVRL 872
            +  FN LIK +     L+ A+L++++M  +G       F+ +++G       +     + E+M +        S+N+++   CK+G V D       M  Q G   +  ++ TL+  LCK G +K      D+     + P +    S++  LC    +KE++++ + M+    C  + + Y   +  LC       A  L   L  +G   D   ++ LI+GLC  ++ ++ ++ +     K   P    +   I  L   G+ ++A+ +
Sbjct:  189 VSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYI-EEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR-DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457          

HSP 2 Score: 78.9518 bits (193), Expect = 5.034e-14
Identity = 56/212 (26.42%), Postives = 103/212 (48.58%), Query Frame = 3
Query:  108 GNLKAALLLVDEMVRW-GQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICY-IFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCK 737
            G ++ AL  + EM    G       F+ LV GLC +  H+K    +++ M +     D  + N +I   CK G V++  ++ D M+ R  +    +Y TL+ +LCK+  +++      +  ++  LP +    SL++ LC  +  + +++LFE M  S  C   +  Y + ++ LC  G    A  +++++   GC    + Y+ LI G CK
Sbjct:  273 GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKA-GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR-SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482          

HSP 3 Score: 77.0258 bits (188), Expect = 1.913e-13
Identity = 60/224 (26.79%), Postives = 101/224 (45.09%), Query Frame = 3
Query:   75 FNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSHIKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKDLHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICY-IFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCKEK 743
            FNSLI+ +    N + A+ L +EM   G E     ++ L+  LC S+  +     +L++M          + N LI   CK    R+ ++IFD M   G++  + +Y TL+  LCK   ++D     D        P      SL+   C    +K++  + + M  S  C    + Y   +  LC  G    A  L+  +  +G NL   AY+P+I+GL +++
Sbjct:  403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC-SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM-TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKR 624          

HSP 4 Score: 73.1738 bits (178), Expect = 2.762e-12
Identity = 51/228 (22.37%), Postives = 110/228 (48.25%), Query Frame = 3
Query:   75 FNSLIKMVHARGNLKAALLLVDEMVRWGQELSLSVFSALVKGLCASRSH-IKACTGLLEKMPKLANKLDQESLNLLIQACCKKGLVRDGKKIFDGMLQRGLTIENESYTTLLMSLCKKGFIKD-LHAFWDIAQNRKWLPGLEDCKSLVECLCHKKLLKESLQLFECMLVSCPCLRSDICYIFLEKLCVTGFSSNAHALVEELLQQGCNLDQMAYSPLIRGLCKEKSFQ 752
            +N ++ ++    +LK   +   +M  WG +  +S F+ L+K LC  R+H ++    +LE MP      D+++   ++Q   ++G +    +I + M++ G +  N S   ++   CK+G ++D L+   +++    + P      +LV  LC    +K ++++ + ML              +  LC  G    A  ++++++ + C+ + + Y+ LI  LCKE   +
Sbjct:  157 YNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC--RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVE 382          
The following BLAST results are available for this feature:
BLAST of DY260151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
PP384_ARATH4.203e-6143.45Pentatricopeptide repeat-containing protein At5g15... [more]
PPR93_ARATH3.486e-1525.00Pentatricopeptide repeat-containing protein At1g62... [more]
PP340_ARATH3.486e-1527.23Pentatricopeptide repeat-containing protein At4g28... [more]
PP360_ARATH4.553e-1524.89Pentatricopeptide repeat-containing protein At5g01... [more]
PP156_ARATH1.014e-1426.76Pentatricopeptide repeat-containing protein At2g16... [more]
PPR37_ARATH1.325e-1426.12Pentatricopeptide repeat-containing protein At1g12... [more]
PPR39_ARATH1.730e-1425.31Pentatricopeptide repeat-containing protein At1g12... [more]
PP247_ARATH1.730e-1425.31Pentatricopeptide repeat-containing protein At3g22... [more]
PPR38_ARATH2.260e-1425.94Putative pentatricopeptide repeat-containing prote... [more]
PP281_ARATH2.260e-1421.77Pentatricopeptide repeat-containing protein At3g53... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YH16FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260151 ID=DY260151; Name=DY260151; organism=Citrus clementina; type=EST; length=1011bp
TTTATTTAGACCTAGACCGAGACGAGTATGAGAGAAAACTAAGTAAGATT
ATTGAAGATTCCATGATACCTAATTTTAACTCTCTTATAAAGATGGTACA
TGCACGTGGTAATTTAAAAGCTGCATTGCTGTTGGTAGATGAAATGGTTC
GCTGGGGTCAAGAACTGTCTCTGTCTGTCTTCTCAGCACTAGTAAAGGGG
CTGTGTGCTTCTCGCTCCCATATCAAGGCGTGCACTGGTCTTCTTGAGAA
AATGCCAAAATTGGCCAATAAGCTAGACCAAGAATCTCTCAATTTGCTTA
TTCAAGCATGCTGCAAGAAGGGATTGGTACGTGATGGGAAGAAAATTTTT
GATGGGATGCTTCAGAGGGGTCTAACAATTGAGAATGAGAGTTATACTAC
TCTATTAATGAGTTTGTGTAAGAAAGGCTTCATCAAGGATCTTCATGCTT
TCTGGGATATTGCTCAAAATAGAAAGTGGTTGCCTGGGTTGGAGGATTGC
AAATCACTTGTGGAATGTCTTTGCCATAAAAAATTGCTGAAAGAATCATT
ACAGCTTTTTGAATGCATGTTAGTGTCCTGTCCCTGCTTAAGGTCAGATA
TTTGTTATATATTCCTGGAAAAGCTTTGTGTTACAGGGTTCTCCAGCAAT
GCACATGCCCTGGTGGAAGAACTTCTACAGCAGGGTTGCAACTTGGATCA
AATGGCTTATAGCCCTCTTATAAGAGGGTTATGTAAGGAGAAAAGTTTTC
AGTTGCCTTTAAAATGCTGGACCCCATGCGGGATAAAAAACTGGGCTCCC
TGCTTGGATGTTTTCTGTTTCTTTATTCCCCCGCTGTTCCCAACTGGGAG
AACTGAAAAAGCCGTTCGCTTAAGAAGAGATTAATTTGAAGGAGCCACCT
TTATTTTTGGTTTCCTTCTCCCGTGCCTTCCTAAGTGGGGATTTTGGGGG
ACCGGGAAAGGCCGAAAAACCCCCCAAGTTTTGTTCCAAAAAATGTTTTC
CCCCCGGGGGA
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