DY262466

Overview
NameDY262466
Unique NameDY262466
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1350
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY262466 vs. ExPASy Swiss-Prot
Match: FBW4_ARATH (F-box/WD-40 repeat-containing protein At3g52030 OS=Arabidopsis thaliana GN=At3g52030 PE=2 SV=2)

HSP 1 Score: 369.777 bits (948), Expect = 2.117e-101
Identity = 196/345 (56.81%), Postives = 230/345 (66.67%), Query Frame = 3 
Query:  120 TIESLNGDIICIIFSSLGFFDLVRCSAVCNSWNAIINRCKLLQLLYCKLHGFSNTSGSS-------LRLHLEELAMKHHRFALEESRIDIDQWKAHSVGVDQCRMKRGLILTGVGDKVMRLWSLEGYKCVEEYSLPNAASLVDFDFDESK---------------------IVGLVGTRICIWRRNGLRSVFPSLEGTFMKGLCMRYFDPEAVVGCEDGTARVFDMYSRKCSQIIRMHCAPVTSLSLSEDQXXXXXXXXXXXXXXXXXXDQRVATLRST-DCTGIKTLCYNPCSRLVFAGTTARYASCWDLRTMKSLWETRISPNVGYSFATLCKRNFQRLGVGG 1067
            +IESL+ DI+CIIFS L  FDLV C+ VCNSWNA+I R KLLQ    K+H   + S SS         + +E+ AMKHH+ AL   RI+I++W+AHS  V QCRMK+GL+LTGVGDKVMRLWSL+ YKC+EEYSLP+A+SL+DFDFDESK                     IVGLVGTRI IWRRNG RS+FPS  GTF KGLCMRY DPEAVVGCEDGTARVFDMYS+ CSQIIR    P+T LSLS++Q                  DQ VATL+ST    GI+T+C+N  + L F GTT  Y SCWDLR M  LWE R+SPNV YS   L  RN   + V G
Sbjct:   22 SIESLDADILCIIFSFLDLFDLVHCTVVCNSWNAVIKRLKLLQASCRKMHHLGSDSPSSSTSLDRPAEIDVEDFAMKHHKMALLRGRIEIERWEAHSHRVSQCRMKKGLLLTGVGDKVMRLWSLKSYKCMEEYSLPDASSLIDFDFDESKKLEVVSLAWEYFDSVVVVVVEIVGLVGTRISIWRRNGQRSIFPSRAGTFPKGLCMRYIDPEAVVGCEDGTARVFDMYSKTCSQIIRTQGGPITCLSLSDNQLFLSGSSLGRVTVSDPLMDQPVATLKSTITAGGIQTICFNQGTNLAFIGTTGGYVSCWDLRKMDRLWEKRVSPNVVYSIQQL--RNDTSVMVAG 364
The following BLAST results are available for this feature:
BLAST of DY262466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FBW4_ARATH2.117e-10156.81F-box/WD-40 repeat-containing protein At3g52030 OS... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA100AC03RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262466 ID=DY262466; Name=DY262466; organism=Citrus clementina; type=EST; length=1350bp
CCTTCGTCTCTCGTGCCACACTAAGTTGGACAACCGCCGACGGCAGATAG
ACGATGGAGCGCACAAGGTCCAGTAGGCGGTCACCGCCGCCGAAGAAGAG
AAGCTCGAAACCTCGGGCGACAATTGAATCCCTCAACGGCGACATAATCT
GTATAATCTTCTCATCCCTCGGGTTCTTCGATCTCGTTAGATGTTCTGCC
GTTTGCAACTCCTGGAACGCCATTATAAACAGATGTAAGTTACTACAACT
ACTCTATTGCAAGCTACATGGCTTCTCGAATACGTCGGGTTCTTCGTTGA
GGTTGCATTTGGAGGAGCTAGCAATGAAGCACCATCGATTTGCTTTAGAA
GAAAGTCGAATTGATATTGATCAATGGAAAGCTCATTCAGTTGGGGTTGA
TCAGTGCCGAATGAAGAGGGGTTTGATTCTAACTGGTGTAGGTGATAAGG
TTATGCGGCTCTGGTCACTAGAAGGATACAAATGTGTGGAAGAGTATTCA
CTTCCAAATGCAGCTTCACTGGTTGATTTTGATTTTGATGAGAGCAAGAT
TGTTGGTTTGGTTGGCACACGTATATGCATATGGAGGCGCAATGGTTTAA
GGAGTGTATTTCCCTCACTTGAAGGCACATTCATGAAGGGTTTATGTATG
CGATACTTTGATCCAGAGGCTGTAGTTGGATGTGAGGATGGGACTGCTCG
TGTGTTTGACATGTATAGTAGAAAATGCTCTCAAATCATTAGGATGCATT
GTGCACCAGTAACATCTTTATCTTTGAGTGAGGATCAGTTAATTATTAGT
GGATCCTCCCTGGGCAGTATCGCAATAGCTGGTCTCTCCTCTGATCAGCG
GGTAGCTACCCTTAGATCAACTGATTGTACAGGCATAAAGACATTGTGTT
ACAACCCATGTTCTCGTCTGGTATTTGCTGGAACTACAGCAAGATATGCA
TCTTGTTGGGATCTTAGGACAATGAAATCTTTATGGGAGACTCGAATAAG
TCCAAATGTTGGTTATTCCTTTGCAACCCTTTGCAAACGAAACTTTCAAC
GTTTGGGGGTTGGTGGGAAATAATGGGGGCCCAACGTTGTTTTTGGATTA
AAAACCATTGGAAAAGTTTCTATCAAAGAAGGGTTAATGGAACATTGGGT
TTCTACAATCCAAGTTTCTTCCAAATAAAGTTCTCCGGGGAGTAAATTTG
AAAAAAAAAAAAGGGAAAAAGAGGCGTTTTGGCGGGGGGGTGTTGGGGTT
GTGTGTTTTATAAATTCCCCAAAAACCAAATAACAAAACCCCCCCCTCTT
TATATGTGTTTTTTGTTTGGGGTTGTGGTGGGGGGGGAGAAAAAAGAAGA
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