Expression: Effect of CaLasSHE460 on pathogenesis

Overview
Analysis NameExpression: Effect of CaLasSHE460 on pathogenesis
MethodIllumina HiSeq 2500 (HISAT 2.0.5, DESeq2)
SourceIntegrative Science Center of Germplasm Creation in Western China
Date performed2024-03-14

This data is from the following manuscript: Wang S, Du M, Dong L, Qu R, Ran D, Ma J, Wang X, Xu L, Li W, He Y, Zou X. Function and molecular mechanism analysis of CaLasSDE460 effector involved in the pathogenesis of "Candidatus Liberibacter asiaticus" in citrus. Molecular horticulture. 2023 Jul 24; 3(1):14. Expression values are in counts and FPKM.

Sample Treatment
CK25-1_Count wild-type control, 25°C
CK25-2_Count wild-type control, 25°C
CK25-3_Count wild-type control, 25°C
L525-1_Count mSDE460 transgenic plant, 25°C
L525-2_Count mSDE460 transgenic plant, 25°C
L525-3_Count mSDE460 transgenic plant, 25°C
CK25-1_FPKM wild-type control, 25°C
CK25-2_FPKM wild-type control, 25°C
CK25-3_FPKM wild-type control, 25°C
L525-1_FPKM mSDE460 transgenic plant, 25°C
L525-2_FPKM mSDE460 transgenic plant, 25°C
L525-3_FPKM mSDE460 transgenic plant, 25°C
CK32-1_Count wild-type control, 32°C
CK32-2_Count wild-type control, 32°C
CK32-3_Count wild-type control, 32°C
L532-1_Count mSDE460 transgenic plant, 32°C
L532-2_Count mSDE460 transgenic plant, 32°C
L532-3_Count mSDE460 transgenic plant, 32°C
CK32-1_FPKM wild-type control, 32°C
CK32-2_FPKM wild-type control, 32°C
CK32-3_FPKM wild-type control, 32°C
L532-1_FPKM mSDE460 transgenic plant, 32°C
L532-2_FPKM mSDE460 transgenic plant, 32°C
L532-3_FPKM mSDE460 transgenic plant, 32°C

 

Properties
Additional information about this analysis:
Property NameValue
Data source filepublic://expression/65f36e778da2a_15358-expression-pt1.txt