DY270848

Overview
NameDY270848
Unique NameDY270848
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1119
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY270848 vs. ExPASy Swiss-Prot
Match: MAO1_SALDC (NAD-dependent malic enzyme OS=Salmonella dublin (strain CT_02021853) GN=sfcA PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 8.602e-25
Identity = 63/180 (35.00%), Postives = 86/180 (47.78%), Query Frame = 2 
Query:  104 LGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKRFCMFNDDIQXXXXXXXXXXXXXXRAQGLSLTDFADQKIXXXXXXXXXXXXXKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGL---REGASLLEVVKKVKPHVL 634
            +G R PR+  +EY + VDEF++AV  RWP  ++QFEDF  K A   L RYR   C FNDDIQ              RA G  L   ++QKI             +  +    R   + DA AR   F++D+ GL+T    NL P  A   +   +        +  SLL+VV+ VKP +L
Sbjct:  211 MGWRHPRITDDEYYAFVDEFIQAVKQRWPDILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQL---SEQKIVFLGAGSAGCGIAEQIIAQTQREGLSEDA-ARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQHWDTENDVLSLLDVVRNVKPDIL 386

HSP 2 Score: 37.7354 bits (86), Expect = 8.602e-25
Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 3 
Query:   18 INPQRILPVMLDVGTNNQKLLEDRLF 95
            I+P   LPV+LDVGTNNQ+LL D L+
Sbjct:  185 ISPAYTLPVVLDVGTNNQQLLNDPLY 210
[Close]
BLAST of DY270848 vs. ExPASy Swiss-Prot
Match: MAO1_SALCH (NAD-dependent malic enzyme OS=Salmonella choleraesuis GN=sfcA PE=3 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 8.602e-25
Identity = 63/180 (35.00%), Postives = 86/180 (47.78%), Query Frame = 2 
Query:  104 LGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKRFCMFNDDIQXXXXXXXXXXXXXXRAQGLSLTDFADQKIXXXXXXXXXXXXXKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGL---REGASLLEVVKKVKPHVL 634
            +G R PR+  +EY + VDEF++AV  RWP  ++QFEDF  K A   L RYR   C FNDDIQ              RA G  L   ++QKI             +  +    R   + DA AR   F++D+ GL+T    NL P  A   +   +        +  SLL+VV+ VKP +L
Sbjct:  211 MGWRHPRITDDEYYAFVDEFIQAVKQRWPDILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQL---SEQKIVFLGAGSAGCGIAEQIIAQTQREGLSEDA-ARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQHWDTENDVLSLLDVVRNVKPDIL 386

HSP 2 Score: 37.7354 bits (86), Expect = 8.602e-25
Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 3 
Query:   18 INPQRILPVMLDVGTNNQKLLEDRLF 95
            I+P   LPV+LDVGTNNQ+LL D L+
Sbjct:  185 ISPAYTLPVVLDVGTNNQQLLNDPLY 210
[Close]
BLAST of DY270848 vs. ExPASy Swiss-Prot
Match: MAO1_ERWT9 (NAD-dependent malic enzyme OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=sfcA PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 8.602e-25
Identity = 61/180 (33.89%), Postives = 88/180 (48.89%), Query Frame = 2 
Query:  104 LGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKRFCMFNDDIQXXXXXXXXXXXXXXRAQGLSLTDFADQKIXXXXXXXXXXXXXKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMG---LREGASLLEVVKKVKPHVL 634
            +G R PR+ GEEY + V+EF++AV +RWP  ++QFEDF  K A   LERYR   C FNDDIQ              RA G  L    +QK+             +  + A  +  G +D  AR + F++D+ GL+T    NL    +   +      G     +  SLL+VV+  KP ++
Sbjct:  211 MGWRHPRITGEEYDNFVNEFIQAVKSRWPNVLLQFEDFAQKNAMPLLERYRDEVCCFNDDIQGTAAVTLGTLIAASRAAGGKL---CEQKVVFLGAGSAGCGIAEQII-AQMKSEGLSDEEARARVFMVDRFGLLTDRLPNLLNFQSRLVQKSDSLSGWDSANDSLSLLDVVRNAKPDIM 386

HSP 2 Score: 37.7354 bits (86), Expect = 8.602e-25
Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 3 
Query:   18 INPQRILPVMLDVGTNNQKLLEDRLF 95
            I+P   LPV+LDVGTNNQ+LL D L+
Sbjct:  185 ISPAYTLPVVLDVGTNNQQLLNDPLY 210
[Close]
BLAST of DY270848 vs. ExPASy Swiss-Prot
Match: MAO1_ECO5E (NAD-dependent malic enzyme OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 8.602e-25
Identity = 63/180 (35.00%), Postives = 89/180 (49.44%), Query Frame = 2 
Query:  104 LGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKRFCMFNDDIQXXXXXXXXXXXXXXRAQGLSLTDFADQKIXXXXXXXXXXXXXKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA---KDPGDFMGLREGASLLEVVKKVKPHVL 634
            +G R PR+  +EY   VDEF++AV  RWP  ++QFEDF  K A   L RYR   C FNDDIQ              RA G  L   +++KI             +M + A  +  G ++  AR K F++D+ GL+T +  NL P         ++  D     +  SLL+VV+ VKP +L
Sbjct:  211 MGWRNPRITDDEYYEFVDEFIQAVKQRWPDVLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQL---SEKKIVFLGAGSAGCGIAEMII-AQTQREGLSEEAARQKVFMVDRFGLLTDKMPNLLPFQTKLVQKRENLSDRDTDSDVLSLLDVVRNVKPDIL 386

HSP 2 Score: 37.7354 bits (86), Expect = 8.602e-25
Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 3 
Query:   18 INPQRILPVMLDVGTNNQKLLEDRLF 95
            I+P   LPV+LDVGTNNQ+LL D L+
Sbjct:  185 ISPAYTLPVVLDVGTNNQQLLNDPLY 210
[Close]
BLAST of DY270848 vs. ExPASy Swiss-Prot
Match: MAO1_ECO57 (NAD-dependent malic enzyme OS=Escherichia coli O157:H7 GN=sfcA PE=3 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 8.602e-25
Identity = 63/180 (35.00%), Postives = 89/180 (49.44%), Query Frame = 2 
Query:  104 LGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKRFCMFNDDIQXXXXXXXXXXXXXXRAQGLSLTDFADQKIXXXXXXXXXXXXXKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA---KDPGDFMGLREGASLLEVVKKVKPHVL 634
            +G R PR+  +EY   VDEF++AV  RWP  ++QFEDF  K A   L RYR   C FNDDIQ              RA G  L   +++KI             +M + A  +  G ++  AR K F++D+ GL+T +  NL P         ++  D     +  SLL+VV+ VKP +L
Sbjct:  211 MGWRNPRITDDEYYEFVDEFIQAVKQRWPDVLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQL---SEKKIVFLGAGSAGCGIAEMII-AQTQREGLSEEAARQKVFMVDRFGLLTDKMPNLLPFQTKLVQKRENLSDRDTDSDVLSLLDVVRNVKPDIL 386

HSP 2 Score: 37.7354 bits (86), Expect = 8.602e-25
Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 3 
Query:   18 INPQRILPVMLDVGTNNQKLLEDRLF 95
            I+P   LPV+LDVGTNNQ+LL D L+
Sbjct:  185 ISPAYTLPVVLDVGTNNQQLLNDPLY 210
[Close]
BLAST of DY270848 vs. ExPASy Swiss-Prot
Match: MAO1_SALA4 (NAD-dependent malic enzyme OS=Salmonella agona (strain SL483) GN=sfcA PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.457e-24
Identity = 63/180 (35.00%), Postives = 85/180 (47.22%), Query Frame = 2 
Query:  104 LGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKRFCMFNDDIQXXXXXXXXXXXXXXRAQGLSLTDFADQKIXXXXXXXXXXXXXKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGL---REGASLLEVVKKVKPHVL 634
            +G R PR+   EY + VDEF++AV  RWP  ++QFEDF  K A   L RYR   C FNDDIQ              RA G  L   ++QKI             +  +    R   + DA AR   F++D+ GL+T    NL P  A   +   +        +  SLL+VV+ VKP +L
Sbjct:  211 MGWRHPRITDNEYYAFVDEFIQAVKQRWPDILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQL---SEQKIVFLGAGSAGCGIAEQIIAQTQREGLSEDA-ARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQHWDTENDVLSLLDVVRNVKPDIL 386

HSP 2 Score: 37.7354 bits (86), Expect = 1.457e-24
Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 3 
Query:   18 INPQRILPVMLDVGTNNQKLLEDRLF 95
            I+P   LPV+LDVGTNNQ+LL D L+
Sbjct:  185 ISPAYTLPVVLDVGTNNQQLLNDPLY 210
[Close]
BLAST of DY270848 vs. ExPASy Swiss-Prot
Match: MAO1_CITK8 (NAD-dependent malic enzyme OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=sfcA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.896e-24
Identity = 62/180 (34.44%), Postives = 86/180 (47.78%), Query Frame = 2 
Query:  104 LGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKRFCMFNDDIQXXXXXXXXXXXXXXRAQGLSLTDFADQKIXXXXXXXXXXXXXKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFM---GLREGASLLEVVKKVKPHVL 634
            +G R PR+  +EY   VDEF++AV  RWP  ++QFEDF  K A   L RYR   C FNDDIQ              RA G  L   ++QKI             +  + A  +  G ++  AR K F++D+ GL+T +  NL        +   +        E  SLL+VV+ VKP +L
Sbjct:  211 MGWRNPRITDDEYYEFVDEFIQAVKQRWPDVLLQFEDFAQKNAMPLLNRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQL---SEQKIVFLGAGSAGCGIAEQII-AQTQREGLSEEAARQKVFMVDRFGLLTDQMPNLLSFQTKLVQKRENLQHWDSESEVLSLLDVVRNVKPDIL 386

HSP 2 Score: 37.7354 bits (86), Expect = 1.896e-24
Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 3 
Query:   18 INPQRILPVMLDVGTNNQKLLEDRLF 95
            I+P   LPV+LDVGTNNQ+LL D L+
Sbjct:  185 ISPAYTLPVVLDVGTNNQQLLNDPLY 210
[Close]
BLAST of DY270848 vs. ExPASy Swiss-Prot
Match: MAO1_BDEBA (NAD-dependent malic enzyme OS=Bdellovibrio bacteriovorus GN=sfcA PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.467e-24
Identity = 61/180 (33.89%), Postives = 87/180 (48.33%), Query Frame = 2 
Query:  104 LGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKRFCMFNDDIQXXXXXXXXXXXXXXRAQGLSLTDFADQKIXXXXXXXXXXXXXKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMG---LREGASLLEVVKKVKPHVL 634
            +G RQPR+ G+EY   VD F++AV  RWP  ++QFEDF  K A   L+RYR   C FNDDIQ              RA G  L    DQ++             +  + A  +  G +D  AR + F++D+ GL+T +  NL    +P  +      G     +  SLL+ V+  KP +L
Sbjct:  211 MGWRQPRITGKEYEDFVDAFVQAVKRRWPDVLLQFEDFAQKNASPILKRYRDEICSFNDDIQGTAAVTVGCLIAASRANGGRL---RDQRVVFLGAGSAGCGIAEQII-AEMKHEGLSDEQARQRVFMVDRFGLLTDKMPNLLEFQSPLVQKTETLAGWEVTNDEISLLDTVRNAKPTIL 386

HSP 2 Score: 36.965 bits (84), Expect = 2.467e-24
Identity = 17/26 (65.38%), Postives = 20/26 (76.92%), Query Frame = 3 
Query:   18 INPQRILPVMLDVGTNNQKLLEDRLF 95
            I+P   LPV+LDVGTNNQ LL D L+
Sbjct:  185 ISPAYTLPVVLDVGTNNQALLNDPLY 210
[Close]
BLAST of DY270848 vs. ExPASy Swiss-Prot
Match: MAO1_SALAR (NAD-dependent malic enzyme OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=sfcA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 5.437e-24
Identity = 62/180 (34.44%), Postives = 85/180 (47.22%), Query Frame = 2 
Query:  104 LGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKRFCMFNDDIQXXXXXXXXXXXXXXRAQGLSLTDFADQKIXXXXXXXXXXXXXKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGL---REGASLLEVVKKVKPHVL 634
            +G R PR+  +EY + VDEF++AV  RWP  ++QFEDF  K A   L RYR   C FNDDIQ              RA G  L   ++QKI             +  +    R   + DA AR K F++D+ GL+T    NL        +   +        +  SLL+VV+ VKP +L
Sbjct:  211 MGWRHPRITDDEYYAFVDEFIQAVKQRWPDILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQL---SEQKIVFLGAGSAGCGIAEQIIAQTQREGLSEDA-ARQKVFMVDRFGLLTDRMPNLLSFQTKLVQKCDNLQHWDTENDVLSLLDVVRNVKPDIL 386

HSP 2 Score: 37.7354 bits (86), Expect = 5.437e-24
Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 3 
Query:   18 INPQRILPVMLDVGTNNQKLLEDRLF 95
            I+P   LPV+LDVGTNNQ+LL D L+
Sbjct:  185 ISPAYTLPVVLDVGTNNQQLLNDPLY 210
[Close]
BLAST of DY270848 vs. ExPASy Swiss-Prot
Match: MAO12_PHOPR (NAD-dependent malic enzyme 2 OS=Photobacterium profundum GN=sfcA2 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.438e-24
Identity = 61/179 (34.08%), Postives = 90/179 (50.28%), Query Frame = 2 
Query:  104 LGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKRFCMFNDDIQXXXXXXXXXXXXXXRAQGLSLTDFADQKIXXXXXXXXXXXXXKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE--GASLLEVVKKVKPHVL 634
            +G R PR+ G+EY   V+EF++AV +RWP A++QFEDF  K A   L RY+ + C FNDDIQ              +A G   ++ ++Q+I             + A+ A     G +D+ AR + F++D+ GL+T   +NL       A+         E    SLL+VV   KP VL
Sbjct:  208 MGWRHPRITGQEYDDFVEEFIQAVKSRWPNALIQFEDFAQKNAMPLLNRYKDKVCCFNDDIQGTAAVTVGSLLAACKAAG---SELSEQRITFVGAGSAGCGIAE-AIVAQMIAEGLSDSAARARIFMVDRWGLLTDNMQNLLDFQQKLAQKSATVSQWNETGNISLLDVVSNGKPTVL 382

HSP 2 Score: 36.965 bits (84), Expect = 5.438e-24
Identity = 15/26 (57.69%), Postives = 20/26 (76.92%), Query Frame = 3 
Query:   18 INPQRILPVMLDVGTNNQKLLEDRLF 95
            INP   LP++LDVGTNN +LL D ++
Sbjct:  182 INPANTLPIVLDVGTNNTQLLSDPMY 207
The following BLAST results are available for this feature:
BLAST of DY270848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
MAO1_SALDC8.602e-2535.00NAD-dependent malic enzyme OS=Salmonella dublin (s... [more]
MAO1_SALCH8.602e-2535.00NAD-dependent malic enzyme OS=Salmonella choleraes... [more]
MAO1_ERWT98.602e-2533.89NAD-dependent malic enzyme OS=Erwinia tasmaniensis... [more]
MAO1_ECO5E8.602e-2535.00NAD-dependent malic enzyme OS=Escherichia coli O15... [more]
MAO1_ECO578.602e-2535.00NAD-dependent malic enzyme OS=Escherichia coli O15... [more]
MAO1_SALA41.457e-2435.00NAD-dependent malic enzyme OS=Salmonella agona (st... [more]
MAO1_CITK81.896e-2434.44NAD-dependent malic enzyme OS=Citrobacter koseri (... [more]
MAO1_BDEBA2.467e-2433.89NAD-dependent malic enzyme OS=Bdellovibrio bacteri... [more]
MAO1_SALAR5.437e-2434.44NAD-dependent malic enzyme OS=Salmonella arizonae ... [more]
MAO12_PHOPR5.438e-2434.08NAD-dependent malic enzyme 2 OS=Photobacterium pro... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP7YO23FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270848 ID=DY270848; Name=DY270848; organism=Citrus clementina; type=EST; length=1119bp
ATGTGGCTGCTCTTTGCATCAATCCACAGAGAATTCTCCCGGTTATGCTT
GATGTTGGCACTAACAATCAAAAGCTGCTTGAAGACCGTCTATTTGAACA
GATTTGGGACTCCGACAACCTAGGCTAGAAGGAGAAGAATATCTATCAAT
TGTTGATGAATTCATGGAAGCTGTTCACGCACGTTGGCCCAAAGCTATTG
TACAGTTCGAGGACTTCCAAATGAAGTGGGCTTTTGAAACTTTGGAACGA
TATCGAAAAAGGTTTTGTATGTTTAATGATGACATACAGGGAACTGCTGG
TGTTGCACTTGCGGGATTATTGGGAACTGTCAGAGCACAAGGTCTATCAT
TGACTGACTTTGCGGACCAAAAGATAGTTGTAGTGGGGGCTGGGAGCGCC
GGGCTTGGTGTTCTTAAAATGGCTGTACAAGCTGCAGCAAGAATGGCAGG
GAACAATGACGCTTTTGCAAGAAATAAATTTTTCCTACTTGACAAAGATG
GTCTCATCACGAAAGAAAGGAAGAATCTTGACCCAGCGGCAGCACCTTTT
GCTAAAGATCCAGGAGATTTTATGGGGCTTAGGGAGGGAGCTAGTCTACT
TGAGGTGGTTAAAAAGGTCAAACCCCATGTGCTTCCTTGGTTTGTCCGGG
CGTAGGTGGTGTCCTTCAAGAATAGGTGCTTAAAGCTATGCGAAGAGTCT
GATTTTGTCCAACCTGGCATTTTTGGCTATGCCAAAATCCCAACATGTAT
GGTCAATTGCACCTGCTGCCTAATCCTTATAAACTCCGCTGGGGTAAAAA
TTATAGTTTTCATACTGAATTTCCTATTTTAAAAATTTGTTTCGTGGTAA
ACCCAAAATCAATCCCAACGAAACTTCCCAAAACCCCACCCATTCTTGTA
CCTTCGCTTTCTACTAACACATTCTCCACTCACATTACATTTTTTTATCT
TACAACTATAATTTTCATACACCTCTCCACAAATTAGTCCCTTTAACTAC
CTCCAAACTCTCATAGACAACAATCTGCCTTTAAATCTTACTCACCTCCC
CCAACCACAAACTCACATACACATCTTAAATCTCAATCTTTCCTCCCTGA
ACCCGAACCCATGCTCCCA
back to top