DY270863 | Citrus Genome Database

Overview


Name	DY270863
Unique Name	DY270863
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	1135

Libraries


Library Name	Type
Fruit-TF	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_LUPAL (Ubiquitin OS=Lupinus albus PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.596e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 150.599 bits (379), Expect = 1.596e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 135.191 bits (339), Expect = 6.940e-31
Identity = 70/73 (95.89%), Postives = 70/73 (95.89%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITLEVESSDTI NVKAKIQDKEGIPPDQQRLIFAGK LEDGRTLADYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73

HSP 4 Score: 73.9442 bits (180), Expect = 1.899e-12
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_LINUS (Ubiquitin OS=Linum usitatissimum PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.596e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 150.599 bits (379), Expect = 1.596e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 135.191 bits (339), Expect = 6.940e-31
Identity = 70/73 (95.89%), Postives = 70/73 (95.89%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITLEVESSDTI NVKAKIQDKEGIPPDQQRLIFAGK LEDGRTLADYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73

HSP 4 Score: 73.9442 bits (180), Expect = 1.899e-12
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_HORVU (Ubiquitin OS=Hordeum vulgare GN=MUB1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.596e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 150.599 bits (379), Expect = 1.596e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 135.191 bits (339), Expect = 6.940e-31
Identity = 70/73 (95.89%), Postives = 70/73 (95.89%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITLEVESSDTI NVKAKIQDKEGIPPDQQRLIFAGK LEDGRTLADYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73

HSP 4 Score: 73.9442 bits (180), Expect = 1.899e-12
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_HELAN (Ubiquitin OS=Helianthus annuus PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.596e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 150.599 bits (379), Expect = 1.596e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 135.191 bits (339), Expect = 6.940e-31
Identity = 70/73 (95.89%), Postives = 70/73 (95.89%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITLEVESSDTI NVKAKIQDKEGIPPDQQRLIFAGK LEDGRTLADYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73

HSP 4 Score: 73.9442 bits (180), Expect = 1.899e-12
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_DESAN (Ubiquitin OS=Deschampsia antarctica PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.596e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 150.599 bits (379), Expect = 1.596e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 135.191 bits (339), Expect = 6.940e-31
Identity = 70/73 (95.89%), Postives = 70/73 (95.89%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITLEVESSDTI NVKAKIQDKEGIPPDQQRLIFAGK LEDGRTLADYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73

HSP 4 Score: 73.9442 bits (180), Expect = 1.899e-12
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_DAUCA (Ubiquitin OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.596e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 150.599 bits (379), Expect = 1.596e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 135.191 bits (339), Expect = 6.940e-31
Identity = 70/73 (95.89%), Postives = 70/73 (95.89%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITLEVESSDTI NVKAKIQDKEGIPPDQQRLIFAGK LEDGRTLADYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73

HSP 4 Score: 73.9442 bits (180), Expect = 1.899e-12
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_BRARA (Ubiquitin OS=Brassica rapa PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.596e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 150.599 bits (379), Expect = 1.596e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 135.191 bits (339), Expect = 6.940e-31
Identity = 70/73 (95.89%), Postives = 70/73 (95.89%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITLEVESSDTI NVKAKIQDKEGIPPDQQRLIFAGK LEDGRTLADYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73

HSP 4 Score: 73.9442 bits (180), Expect = 1.899e-12
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_AVESA (Ubiquitin OS=Avena sativa PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.596e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 150.599 bits (379), Expect = 1.596e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 135.191 bits (339), Expect = 6.940e-31
Identity = 70/73 (95.89%), Postives = 70/73 (95.89%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITLEVESSDTI NVKAKIQDKEGIPPDQQRLIFAGK LEDGRTLADYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73

HSP 4 Score: 73.9442 bits (180), Expect = 1.899e-12
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_AVEFA (Ubiquitin OS=Avena fatua PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.596e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 150.599 bits (379), Expect = 1.596e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 135.191 bits (339), Expect = 6.940e-31
Identity = 70/73 (95.89%), Postives = 70/73 (95.89%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITLEVESSDTI NVKAKIQDKEGIPPDQQRLIFAGK LEDGRTLADYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73

HSP 4 Score: 73.9442 bits (180), Expect = 1.899e-12
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_ASPOF (Ubiquitin OS=Asparagus officinalis PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.596e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 150.599 bits (379), Expect = 1.596e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 135.191 bits (339), Expect = 6.940e-31
Identity = 70/73 (95.89%), Postives = 70/73 (95.89%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITLEVESSDTI NVKAKIQDKEGIPPDQQRLIFAGK LEDGRTLADYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73

HSP 4 Score: 73.9442 bits (180), Expect = 1.899e-12
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

The following BLAST results are available for this feature:

BLAST of DY270863 vs. ExPASy Swiss-Prot

BLAST of DY270863 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_LUPAL	1.596e-35	100.00	Ubiquitin OS=Lupinus albus PE=3 SV=1	[more]
UBIQ_LINUS	1.596e-35	100.00	Ubiquitin OS=Linum usitatissimum PE=3 SV=1	[more]
UBIQ_HORVU	1.596e-35	100.00	Ubiquitin OS=Hordeum vulgare GN=MUB1 PE=3 SV=1	[more]
UBIQ_HELAN	1.596e-35	100.00	Ubiquitin OS=Helianthus annuus PE=3 SV=1	[more]
UBIQ_DESAN	1.596e-35	100.00	Ubiquitin OS=Deschampsia antarctica PE=2 SV=1	[more]
UBIQ_DAUCA	1.596e-35	100.00	Ubiquitin OS=Daucus carota PE=3 SV=1	[more]
UBIQ_BRARA	1.596e-35	100.00	Ubiquitin OS=Brassica rapa PE=3 SV=1	[more]
UBIQ_AVESA	1.596e-35	100.00	Ubiquitin OS=Avena sativa PE=1 SV=1	[more]
UBIQ_AVEFA	1.596e-35	100.00	Ubiquitin OS=Avena fatua PE=3 SV=1	[more]
UBIQ_ASPOF	1.596e-35	100.00	Ubiquitin OS=Asparagus officinalis PE=3 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	KN0AAP7YP18FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DY270863 ID=DY270863; Name=DY270863; organism=Citrus clementina; type=EST; length=1135bp
CAGAGGCTTATCTTTGCCGGTAAACAGCTCGAGGATGGTCGCACACTTGC
TGATTATAACATCCAGAAGGAGTCAACCCTCCACTTGGTCCTCCGTCTCC
GTGGTGGTATGCAGATCTTTGTAAAGACCCTCACTGGAAAGACTATCACC
CTTGAGGTGGAAAGCTCCGACACCATTGACAATGTCAAAGCCAAAATTCA
GGATAAGGAAGGGATCCCACCAGACCAGCAAAGGCTCATCTTTGCCGGTA
AACAACTAGAGGATGGACGCACACTTGCAGACTACAACATCCAGAAGGAA
TCAACCCTTCATTTGGTCCTCCGTCTCAGGGGTGGCATGCAGATTTTTGT
GAAAACCCTGACTGGTAAGACTATAACTTTGGAGGTTGAAAGCTCTGACA
CGATCGACAATGTCAAGGCCAAGATACAGGACAAGGAGGGCATCCCACCT
GATCAACAGAGGTTAATCTTTGCCGGCAAACAACTTGAAGATGGTCGTAC
TCTTGCTGACTACAACATCCAGAAGGAGTCAACCCTCCATTTGGTGCTTC
GTCTCCGTGGTGGCATGCAGATCTTTGTGAAAACCCTCACCGGAAAAACA
ATTACTCTTGAGGTTGAAAGTTCTGACACCATCGGCAACGTGAAAGCAAA
AATTCAGGACAAGGAGGGTATCCCACCAGATCAGCAGAGGCTCATTTTTG
CTGGAAAGCCGCTTGAAGATGGAAGGACTCTTGCAGACTATAACATCCAG
AAAGAATCCACTCTTCCCTTGGTTCTTCGCCTCCTGGTGGTATGCAAATT
TTGTGAAGACCCTCCCGGGGAAAACCCTCCCATTGGAGGTTAAAAGTTCG
GAACCCATTGAACAAGTGAAGGGCAAAAATCCCGAAAAAGGAGGGGAATT
CCCCCCAAACCCGAAAAGGTTGATCCTTTCGCGGAAAAAAACCTTGAGGG
AGGGAAGAACCCCTGGGTGATTTAAAAATTCCCAAAAGGATTCCCCCTCC
GGCACTTTTGGGGCCCCCCCCCCCCCGGGAAGGGTTTCCAAATTGTGGGC
CCCTCCGGGGGGGTGGGTGTTGTTCCCAAAATTTCTTCTTTCGGTTTTTT
TCCTGGGGTATTAGAGGGTTTCCCCTCCGCCCCCA