DY270863 | Citrus Genome Database

Overview


Name	DY270863
Unique Name	DY270863
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	1135

Libraries


Library Name	Type
Fruit-TF	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_ARATH (Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.596e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 150.599 bits (379), Expect = 1.596e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 135.191 bits (339), Expect = 6.940e-31
Identity = 70/73 (95.89%), Postives = 70/73 (95.89%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITLEVESSDTI NVKAKIQDKEGIPPDQQRLIFAGK LEDGRTLADYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73

HSP 4 Score: 73.9442 bits (180), Expect = 1.899e-12
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_COPCO (Ubiquitin OS=Coprinus congregatus PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 3.556e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 149.443 bits (376), Expect = 3.556e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 134.035 bits (336), Expect = 1.546e-30
Identity = 69/73 (94.52%), Postives = 70/73 (95.89%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITLEVESSDTI NVKAKIQDKEGIPPDQQRLIFAGK LEDGRTL+DYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73

HSP 4 Score: 72.7886 bits (177), Expect = 4.230e-12
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_CHLRE (Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 4.645e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 149.058 bits (375), Expect = 4.645e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 134.806 bits (338), Expect = 9.064e-31
Identity = 70/73 (95.89%), Postives = 70/73 (95.89%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITLEVESSDTI NVKAKIQDKEGIPPDQQRLIFAGK LEDGRTLADYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73

HSP 4 Score: 73.9442 bits (180), Expect = 1.899e-12
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_YEAST (Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 7.922e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 7.922e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 132.88 bits (333), Expect = 3.444e-30
Identity = 68/73 (93.15%), Postives = 70/73 (95.89%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITLEVESSDTI NVK+KIQDKEGIPPDQQRLIFAGK LEDGRTL+DYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73

HSP 4 Score: 72.7886 bits (177), Expect = 4.230e-12
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_SCHPO (Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 7.922e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 7.922e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 132.88 bits (333), Expect = 3.444e-30
Identity = 68/73 (93.15%), Postives = 70/73 (95.89%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITLEVESSDTI NVK+KIQDKEGIPPDQQRLIFAGK LEDGRTL+DYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73

HSP 4 Score: 72.7886 bits (177), Expect = 4.230e-12
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_KLULA (Ubiquitin OS=Kluyveromyces lactis GN=ubi3 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 7.922e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 7.922e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 132.88 bits (333), Expect = 3.444e-30
Identity = 68/73 (93.15%), Postives = 70/73 (95.89%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITLEVESSDTI NVK+KIQDKEGIPPDQQRLIFAGK LEDGRTL+DYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73

HSP 4 Score: 72.7886 bits (177), Expect = 4.230e-12
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_CRYNE (Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 7.922e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 7.922e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 132.88 bits (333), Expect = 3.444e-30
Identity = 68/73 (93.15%), Postives = 70/73 (95.89%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITLEVESSDTI NVK+KIQDKEGIPPDQQRLIFAGK LEDGRTL+DYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73

HSP 4 Score: 72.7886 bits (177), Expect = 4.230e-12
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_CANAL (Ubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 7.922e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 7.922e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 132.88 bits (333), Expect = 3.444e-30
Identity = 68/73 (93.15%), Postives = 70/73 (95.89%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITLEVESSDTI NVK+KIQDKEGIPPDQQRLIFAGK LEDGRTL+DYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73

HSP 4 Score: 72.7886 bits (177), Expect = 4.230e-12
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBL1_ORYSJ (Ubiquitin-like protein 1 OS=Oryza sativa subsp. japonica GN=UBL1 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.035e-34
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.902 bits (372), Expect = 1.035e-34
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 134.42 bits (337), Expect = 1.184e-30
Identity = 69/73 (94.52%), Postives = 70/73 (95.89%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGK LEDGRTLADYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73

HSP 4 Score: 73.9442 bits (180), Expect = 1.899e-12
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_NEUCR (Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.351e-34
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.517 bits (371), Expect = 1.351e-34
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 132.109 bits (331), Expect = 5.875e-30
Identity = 68/73 (93.15%), Postives = 69/73 (94.52%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITLEVESSDTI NVK KIQDKEGIPPDQQRLIFAGK LEDGRTL+DYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73

HSP 4 Score: 72.7886 bits (177), Expect = 4.230e-12
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

The following BLAST results are available for this feature:

BLAST of DY270863 vs. ExPASy Swiss-Prot

BLAST of DY270863 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_ARATH	1.596e-35	100.00	Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=...	[more]
UBIQ_COPCO	3.556e-35	98.68	Ubiquitin OS=Coprinus congregatus PE=1 SV=1	[more]
UBIQ_CHLRE	4.645e-35	98.68	Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=...	[more]
UBIQ_YEAST	7.922e-35	97.37	Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1...	[more]
UBIQ_SCHPO	7.922e-35	97.37	Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=...	[more]
UBIQ_KLULA	7.922e-35	97.37	Ubiquitin OS=Kluyveromyces lactis GN=ubi3 PE=1 SV=...	[more]
UBIQ_CRYNE	7.922e-35	97.37	Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 ...	[more]
UBIQ_CANAL	7.922e-35	97.37	Ubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1	[more]
UBL1_ORYSJ	1.035e-34	97.37	Ubiquitin-like protein 1 OS=Oryza sativa subsp. ja...	[more]
UBIQ_NEUCR	1.351e-34	97.37	Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1	[more]

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Properties


Property Name	Value
Genbank description	KN0AAP7YP18FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DY270863 ID=DY270863; Name=DY270863; organism=Citrus clementina; type=EST; length=1135bp
CAGAGGCTTATCTTTGCCGGTAAACAGCTCGAGGATGGTCGCACACTTGC
TGATTATAACATCCAGAAGGAGTCAACCCTCCACTTGGTCCTCCGTCTCC
GTGGTGGTATGCAGATCTTTGTAAAGACCCTCACTGGAAAGACTATCACC
CTTGAGGTGGAAAGCTCCGACACCATTGACAATGTCAAAGCCAAAATTCA
GGATAAGGAAGGGATCCCACCAGACCAGCAAAGGCTCATCTTTGCCGGTA
AACAACTAGAGGATGGACGCACACTTGCAGACTACAACATCCAGAAGGAA
TCAACCCTTCATTTGGTCCTCCGTCTCAGGGGTGGCATGCAGATTTTTGT
GAAAACCCTGACTGGTAAGACTATAACTTTGGAGGTTGAAAGCTCTGACA
CGATCGACAATGTCAAGGCCAAGATACAGGACAAGGAGGGCATCCCACCT
GATCAACAGAGGTTAATCTTTGCCGGCAAACAACTTGAAGATGGTCGTAC
TCTTGCTGACTACAACATCCAGAAGGAGTCAACCCTCCATTTGGTGCTTC
GTCTCCGTGGTGGCATGCAGATCTTTGTGAAAACCCTCACCGGAAAAACA
ATTACTCTTGAGGTTGAAAGTTCTGACACCATCGGCAACGTGAAAGCAAA
AATTCAGGACAAGGAGGGTATCCCACCAGATCAGCAGAGGCTCATTTTTG
CTGGAAAGCCGCTTGAAGATGGAAGGACTCTTGCAGACTATAACATCCAG
AAAGAATCCACTCTTCCCTTGGTTCTTCGCCTCCTGGTGGTATGCAAATT
TTGTGAAGACCCTCCCGGGGAAAACCCTCCCATTGGAGGTTAAAAGTTCG
GAACCCATTGAACAAGTGAAGGGCAAAAATCCCGAAAAAGGAGGGGAATT
CCCCCCAAACCCGAAAAGGTTGATCCTTTCGCGGAAAAAAACCTTGAGGG
AGGGAAGAACCCCTGGGTGATTTAAAAATTCCCAAAAGGATTCCCCCTCC
GGCACTTTTGGGGCCCCCCCCCCCCCGGGAAGGGTTTCCAAATTGTGGGC
CCCTCCGGGGGGGTGGGTGTTGTTCCCAAAATTTCTTCTTTCGGTTTTTT
TCCTGGGGTATTAGAGGGTTTCCCCTCCGCCCCCA