DY270887
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY270887 vs. ExPASy Swiss-Prot
Match: COX10_DEBHA (Protoheme IX farnesyltransferase, mitochondrial OS=Debaryomyces hansenii GN=COX10 PE=3 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 1.490e-26 Identity = 70/182 (38.46%), Postives = 102/182 (56.04%), Query Frame = 1 Query: 337 YWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTPLKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPATLYFWQKPHFMALAYLCRNDY 882 Y +L+K L++LV +S +A+ S T+ L L + GT + + +AN++N E D KM RT+ RP+ G IS + A +A G G +L N + L N++LY+++YT LK+ +NTWVGAIVGAIPPL+GW A+ L LY WQ PHF AL++ + Y Sbjct: 144 YVKLTKPNLTILVTLSSICSYAI-SPYTVSLPELLFLTMGTALCSGAANAINMGREPEFDKKMPRTVGRPVVRGLISPKQAYQFAGITGSLGCTMLFLGVNPTVSFLGFLNIVLYSWIYTSLKRKSIINTWVGAIVGAIPPLMGWAASSPLDHPGAWCLAGLLYAWQFPHFNALSHNIADQY 324
BLAST of DY270887 vs. ExPASy Swiss-Prot
Match: COXX_THET8 (Protoheme IX farnesyltransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=ctaB PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.947e-26 Identity = 72/187 (38.50%), Postives = 104/187 (55.61%), Query Frame = 1 Query: 331 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYT-PLKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPATLYFWQKPHFMALAYLCRNDYAA 888 R Y L+K R+ L++ T+ G + + L G M+A +AN++N + + DA+MKRT +RP + R+S R A+ +A ++ V G A+L W AN+L A LA LI Y VYT LK+ N +G GA PPL+GW A G +SL L A ++FW HF ALA + ++DY A Sbjct: 328 RDYLALTKPRVISLLLFTALFGALIAAKGWPGLGVFLAVALGGYMMAGAANAINMVVDRDIDARMKRTAKRPTVTQRVSSRDALLFAFALAVLGFAVLWWGANLLAATLALMGLIWYVLVYTLYLKRRTWHNIVIGGAAGAFPPLVGWAAVTGELSLFAWYLFALIFFWTPVHFWALALMIQDDYRA 514
BLAST of DY270887 vs. ExPASy Swiss-Prot
Match: COXX_THET2 (Protoheme IX farnesyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=ctaB PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.947e-26 Identity = 72/187 (38.50%), Postives = 104/187 (55.61%), Query Frame = 1 Query: 331 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYT-PLKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPATLYFWQKPHFMALAYLCRNDYAA 888 R Y L+K R+ L++ T+ G + + L G M+A +AN++N + + DA+MKRT +RP + R+S R A+ +A ++ V G A+L W AN+L A LA LI Y VYT LK+ N +G GA PPL+GW A G +SL L A ++FW HF ALA + ++DY A Sbjct: 328 RDYLALTKPRVISLLLFTALFGALIAAKGWPGLGVFLAVALGGYMMAGAANAINMVVDRDIDARMKRTAKRPTVTQRVSSRDALLFAFALAVLGFAVLWWGANLLAATLALMGLIWYVLVYTLYLKRRTWHNIVIGGAAGAFPPLVGWAAVTGELSLFAWYLFALIFFWTPVHFWALALMIQDDYRA 514
BLAST of DY270887 vs. ExPASy Swiss-Prot
Match: COXX_OPITP (Protoheme IX farnesyltransferase OS=Opitutus terrae (strain DSM 11246 / PB90-1) GN=ctaB PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.947e-26 Identity = 71/184 (38.59%), Postives = 97/184 (52.72%), Query Frame = 1 Query: 337 YWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTPLKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPATLYFWQKPHFMALAYLCRNDYAA 888 Y EL+K RLSML V T+ G+ L + D L GT A +LNQ E DA MKRT RP+P+G+++ A + + LL + L A + Y YTP K+ +T +GA+ GA PPL+GW+A G V+ G +L L+FWQ PHFMA+A+ R DY+A Sbjct: 14 YLELTKPRLSMLSVMTALVGY-LAARPPWDPIQLALLVLGTSAAAGGVAALNQWLEHDTDAHMKRTADRPIPAGKVATGSAFVLGVLMCIGSLFLLYALVHPLAALFTLLTIFSYLGWYTPAKRWSRWSTEIGAVAGAFPPLIGWSAGEGRVTALGWVLFGVLFFWQVPHFMAVAWTYRKDYSA 196
BLAST of DY270887 vs. ExPASy Swiss-Prot
Match: COXX_AGRT5 (Protoheme IX farnesyltransferase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ctaB PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 2.542e-26 Identity = 70/187 (37.43%), Postives = 97/187 (51.87%), Query Frame = 1 Query: 331 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPATLYFWQKPHFMALAYLCRNDYAA 888 R Y+EL K R+ LVV T+ G L G + GL + A ++ +LN ++ DA M RT +RP+PSGRI+ R A+ + ++ +L N +AGL A + YA VYT LK+ P N +G GA PP+LGW G VSL+ +IL ++ W HF ALA DY A Sbjct: 23 RDYFELLKPRVMSLVVFTAFAGLVLAPGEINPILGLI-AILCIAVGAGASGALNMWYDADIDAVMTRTAKRPIPSGRIAPREALAFGLTLSAFSVVILGLAVNWFSAGLLAFTIFFYAVVYTMWLKRSTPQNIVIGGAAGAFPPMLGWACVTGGVSLDSVILFLIIFLWTPAHFWALALFKMRDYGA 208
BLAST of DY270887 vs. ExPASy Swiss-Prot
Match: CYOE1_PSEPW (Protoheme IX farnesyltransferase 1 OS=Pseudomonas putida (strain W619) GN=cyoE1 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 3.320e-26 Identity = 69/186 (37.10%), Postives = 106/186 (56.99%), Query Frame = 1 Query: 331 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPATLYFWQKPHFMALAYLCRNDYA 885 R Y EL+K ++ +L++ TS G L + + + + L + G + A A ++N + + DA M RT +RPL GR++ A+ +A ++ + G ALL N LTA L ++L+ YA +YT LK+ P N +G + GA PPLLGW A GHVS ++L ++ W PHF ALA + +YA Sbjct: 13 RDYLELTKPKVVVLMLITSLVGMFLATRAGVPWSVLLFGNLGIALCAGGAAAVNHVLDRRIDALMARTHKRPLAEGRVAPLPALLFALALALLGMALLLMFTNALTAWLTLASLLGYAVLYTGFLKRATPQNIVIGGLAGAAPPLLGWVAVSGHVSAEPLLLVLIIFAWTPPHFWALAIHRKEEYA 198
BLAST of DY270887 vs. ExPASy Swiss-Prot
Match: COXX_THEEB (Protoheme IX farnesyltransferase OS=Thermosynechococcus elongatus (strain BP-1) GN=ctaB PE=3 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 3.320e-26 Identity = 69/184 (37.50%), Postives = 101/184 (54.89%), Query Frame = 1 Query: 337 YWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPATLYFWQKPHFMALAYLCRNDYA 885 Y +L+K RL +L + T+ + + L T AA+AN++N L++ DA M+RT RPLP+GR++ AV A + + +LLA AN+L+A LA + + +Y VYT LK+ P N +G GAIPPL+GW A G +S +L ++ W PHF LA L + DYA Sbjct: 21 YVQLTKPRLILLFLITTAAAMEVAGQGRVSPQLLLITLGSGTCAAAAANTINCLYDRDIDAVMERTRHRPLPAGRVAPWEAVFLAVLLAITAFSLLAAFANLLSACLAMAGIAVYVGVYTHWLKRSSPQNIVIGGAAGAIPPLVGWAAVTGELSWAAWVLFGMIFVWTPPHFWPLAMLIQEDYA 204
BLAST of DY270887 vs. ExPASy Swiss-Prot
Match: COXX_ROSS1 (Protoheme IX farnesyltransferase OS=Roseiflexus sp. (strain RS-1) GN=ctaB PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 3.320e-26 Identity = 65/184 (35.33%), Postives = 101/184 (54.89%), Query Frame = 1 Query: 337 YWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPATLYFWQKPHFMALAYLCRNDYA 885 Y L+K + L++ T+ T + +L+ + WT G ++A+ ++S+N + D M RT RRP+PSGRI HA+ ++GV +LA N+L A LA + + Y F+YT LK+ N +G GA PPL+GW A G ++ ++L ++FW PHF ALA + + DYA Sbjct: 254 YISLTKPGVISLLILTTITSMYITPAGIPELSLVLWTTLGGWLMASGSHSINCYLDKDIDVNMGRTGRRPIPSGRIPAWHALALGIALGVVAFVILALFVNLLAAILALAGFLYYVFIYTIWLKRTSKHNIVIGGGAGAFPPLVGWAAVTGSLAPEALLLWLIVFFWTPPHFWALALIRQKDYA 437
BLAST of DY270887 vs. ExPASy Swiss-Prot
Match: COXX_MYXXD (Protoheme IX farnesyltransferase OS=Myxococcus xanthus (strain DK 1622) GN=ctaB PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 3.320e-26 Identity = 70/181 (38.67%), Postives = 95/181 (52.49%), Query Frame = 1 Query: 346 LSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTPLKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPATLYFWQKPHFMALAYLCRNDYAA 888 L+K RLS LV+ T+ G L G + L T T +AN+LN +E +D M RT RPLPSGR+ A+ + S+ LA AN+LTA L L+ Y YTPLK VG + GA+PPL+GWTA + + G L A ++ WQ PHF+A+A + +Y A Sbjct: 18 LTKPRLSSLVLVTAAGGMWLAPGHMGAVNALV-TLLATAGTVGAANALNCYWERHSDQFMDRTRNRPLPSGRMEPAVALWFGISLAAVSLPALALGANVLTAALGLVALLSYVLAYTPLKARTSAAMLVGGVPGALPPLMGWTAVTNQMDVGGFSLFAIMFLWQMPHFIAIALFRKEEYRA 197
BLAST of DY270887 vs. ExPASy Swiss-Prot
Match: COX10_DICDI (Probable protoheme IX farnesyltransferase, mitochondrial OS=Dictyostelium discoideum GN=cox10 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 3.320e-26 Identity = 73/186 (39.25%), Postives = 100/186 (53.76%), Query Frame = 1 Query: 337 YWELSKARLSMLVVATSGTGFALGSG-STIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVA--GTALLAWKANMLTAG-LAASNLILYAFVYTPLKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPATLYFWQKPHFMALAYLCRNDY 882 Y L K +++ V T+ G+ D L GT + + SAN NQ E+ +D KM RT RPL G I+ A W S+ + G +A ++ G LAA N+ILY + YT LK++ P+NTW+GA VGAIPPL+G AA G GM+L +Y WQ PHF+AL+ + R Y Sbjct: 149 YMTLIKLPITVYVTLTAIAGYVAACPIGAFDWVVLSQVSIGTFLASCSANIHNQEIEVQHDRKMPRTKDRPLVIGTINRGKA--WVGSIALLTLGFGTMAVTPSLFVPGTLAACNVILYCW-YTDLKRVTPLNTWIGAFVGAIPPLIGSVAATGEFEAIGMLLATFMYIWQIPHFLALSQVLREQY 331 The following BLAST results are available for this feature:
BLAST of DY270887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY270887 ID=DY270887; Name=DY270887; organism=Citrus clementina; type=EST; length=1214bpback to top |