DY270912
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY270912 vs. ExPASy Swiss-Prot
Match: RL4_LYSSC (50S ribosomal protein L4 OS=Lysinibacillus sphaericus (strain C3-41) GN=rplD PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 6.772e-29 Identity = 75/199 (37.69%), Postives = 112/199 (56.28%), Query Frame = 3 Query: 141 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLXXXXXXXXXXXXENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 737 +LS TG +GE L+ + AV+ A++ + R+G R EV GGGRKP+ QK TGRAR+GS R+P GGG+VFGP PR +S K+ KK +RL +N +V++ PKTKEF + ++ L+ +K+ F+ ++ ENV S+RNI + +LT +N+ D+L E +V T S V+ Sbjct: 6 VLSQTGASVGEIELNDAIFGIEPNEAVLFDAVVAQRASLRQGNHKVKNRSEVAGGGRKPWRQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYSYKLPKKVRRLALKSALSAKVVEQNFLVLDAL--TLAAPKTKEFTKILKDLSLE--KKSLFVTADLDENVALSARNIPGVTVLTANGINVLDLLGHEKVVFTKSAVE 200
BLAST of DY270912 vs. ExPASy Swiss-Prot
Match: RL4_ALKMQ (50S ribosomal protein L4 OS=Alkaliphilus metalliredigens (strain QYMF) GN=rplD PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 6.772e-29 Identity = 72/199 (36.18%), Postives = 111/199 (55.78%), Query Frame = 3 Query: 141 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLXXXXXXXXXXXXENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 737 + + +G+K+ E L + V++ A+ + NKR+GT S TR EVRGGGRKP+ QK TGRAR G+ R+PL GGG VF PKPRD S + +K KRL E +V++E + PKTK+ + ++ L+ +K +V E +E + KS+ NI + T+N++DIL+ + ++T V+ Sbjct: 6 VYNVSGQKVSEMELSENIFGVEVNEHVLYEAVKNQLANKRQGTQSAKTRAEVRGGGRKPWKQKGTGRARAGTIRSPLWIGGGTVFAPKPRDHSYTLPRKVKRLALKSALTSKVNNEELLVLDEL--SLDTPKTKDMVNILK--NLNADKKVLLVVGEKNEAIIKSASNIPGVTTALVNTINVYDILNHDKFIITKDAVE 200
BLAST of DY270912 vs. ExPASy Swiss-Prot
Match: RL4_THEMA (50S ribosomal protein L4 OS=Thermotoga maritima GN=rplD PE=1 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 8.844e-29 Identity = 88/227 (38.77%), Postives = 117/227 (51.54%), Query Frame = 3 Query: 141 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLXXXXXXXXXXXXENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE----NVEKSSRNIGTLKMLTPRT---------------LNLFDILDAETLVLTPSTVDFLNGRYGVE 764 +L+ GEK+G + D V+ R + + N+R GTAST TRGEV GGGRKP+ QK TGRAR GS R+P+ GGVV GPKPRDWS K+NKK K+L +V++ D K ERPKTK E ++ L K T +V+ E NV+ S RN+ +K++ LN+FD+L + LVLT V + G E Sbjct: 6 LLNVKGEKVGTLEISDFVFNIDPNYDVMWRYVDMQLSNRRAGTASTKTRGEVSGGGRKPWPQKHTGRARHGSIRSPIWRHGGVVHGPKPRDWSKKLNKKMKKLALRSALSVKYRENKLLVLD--DLKLERPKTKSLKEILQ--NLQLSDKKTLIVLPWKEEGYMNVKLSGRNLPDVKVIIADNPNNSKNGEKAVRIDGLNVFDMLKYDYLVLTRDMVSKIEEVLGNE 228
BLAST of DY270912 vs. ExPASy Swiss-Prot
Match: RL4_CLOPE (50S ribosomal protein L4 OS=Clostridium perfringens GN=rplD PE=3 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 8.844e-29 Identity = 72/200 (36.00%), Postives = 117/200 (58.50%), Query Frame = 3 Query: 156 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLXXXXXXXXXXXXENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRY 755 G+++G+ L+ + + + +H+ ++ + NKR+GT S TR EVRGGG KP+ QK TGRAR+GS R P GGVVF PKPRD+ + I K +++ + +V+E D FE PKTKE ++ + + +K + EV+ENV KS+RNI + ++ +N++D+L+ +TL++T V+ + Y Sbjct: 11 GQQVGDIQLNEQVFGVEVNKYALHQVVVAQLANKRQGTQSAKTRSEVRGGGIKPWRQKGTGRARQGSIRAPQWIKGGVVFAPKPRDYRMSIPKSMRKV--AMTSALTSKVADMVVLE--DLTFEAPKTKEAVKMLNAF---EAKKTLIITAEVNENVYKSARNIRGVTVMPVNNINVYDLLNCKTLMITKEAVNKIEEVY 203
BLAST of DY270912 vs. ExPASy Swiss-Prot
Match: RL4_CLOP1 (50S ribosomal protein L4 OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=rplD PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 8.844e-29 Identity = 72/200 (36.00%), Postives = 117/200 (58.50%), Query Frame = 3 Query: 156 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLXXXXXXXXXXXXENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRY 755 G+++G+ L+ + + + +H+ ++ + NKR+GT S TR EVRGGG KP+ QK TGRAR+GS R P GGVVF PKPRD+ + I K +++ + +V+E D FE PKTKE ++ + + +K + EV+ENV KS+RNI + ++ +N++D+L+ +TL++T V+ + Y Sbjct: 11 GQQVGDIQLNEQVFGVEVNKYALHQVVVAQLANKRQGTQSAKTRSEVRGGGIKPWRQKGTGRARQGSIRAPQWIKGGVVFAPKPRDYRMSIPKSMRKV--AMTSALTSKVADMVVLE--DLTFEAPKTKEAVKMLNAF---EAKKTLIITAEVNENVYKSARNIEGVTVMPVNNINVYDLLNCKTLMITKEAVNKIEEVY 203
BLAST of DY270912 vs. ExPASy Swiss-Prot
Match: RL4_BACWK (50S ribosomal protein L4 OS=Bacillus weihenstephanensis (strain KBAB4) GN=rplD PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 8.844e-29 Identity = 73/195 (37.44%), Postives = 112/195 (57.44%), Query Frame = 3 Query: 153 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLXXXXXXXXXXXXENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 737 TG ++GE L + AV+ A++ + R+GT TR EVRGGGRKP+ QK TGRAR+GS R+P GGG VFGP PR ++ K+ KK +RL N +V+E D PKTK+ + ++ GL ++KA + + +E+VE S+RNI + ++T +N+ D+L + L++T + V+ Sbjct: 10 TGSQVGEIELAEAIFGIEPNEAVLFEAVMMQRASLRQGTHKVKTRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYAYKLPKKVRRLAIKSALATKVVENNIVVLE--DLVLNAPKTKDMVAVLK--GLTVEKKALIVTADANESVELSARNIPGVTVITADGVNVLDVLHHDKLIMTKAAVE 200
BLAST of DY270912 vs. ExPASy Swiss-Prot
Match: RL4_DESPS (50S ribosomal protein L4 OS=Desulfotalea psychrophila GN=rplD PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.155e-28 Identity = 78/211 (36.97%), Postives = 114/211 (54.03%), Query Frame = 3 Query: 120 QLASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLXXXXXXXXXXXXENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGR 752 ++ S + +++ EK+ E L+ + ++H + KR GTAST TR EVRGGG KP+ QK TGRAR GS +PL GGGV FGPKPRD+S K+N+K ++ N IV++ F + KTKEF M+ L A ++ + SEN+ KS RN+ ++L LN++DIL + +VL ++ L R Sbjct: 3 RIMSTVSVVNTNNEKVDEIELNDAIFNREVKEYILHDVVRMQRAAKRAGTASTKTRVEVRGGGAKPWRQKGTGRARAGSRTSPLWRGGGVTFGPKPRDYSFKLNRKVRQQAVSMALSARFQEGNLIVLDNF--IMDAIKTKEFASTMKTLEL---ANALIVMDDASENLSKSCRNVHGYRILPAEGLNVYDILLHKKVVLVKPVIESLEKR 208
BLAST of DY270912 vs. ExPASy Swiss-Prot
Match: RL4_BACHK (50S ribosomal protein L4 OS=Bacillus thuringiensis subsp. konkukian GN=rplD PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.155e-28 Identity = 73/195 (37.44%), Postives = 112/195 (57.44%), Query Frame = 3 Query: 153 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLXXXXXXXXXXXXENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 737 TG ++GE L + AV+ A++ + R+GT TR EVRGGGRKP+ QK TGRAR+GS R+P GGG VFGP PR ++ K+ KK +RL N +V+E D PKTK+ + ++ GL ++KA + + +E+VE S+RNI + ++T +N+ D+L + L++T + V+ Sbjct: 10 TGSQVGEIELAEAIFGIEPNEAVLFEAVMMQRASLRQGTHKVKTRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYAYKLPKKVRRLAIKSALATKVVENNIVVLE--DLVLNAPKTKDMLAVLK--GLTVEKKALIVTADANESVELSARNIPGVTVITADGVNVLDVLHHDKLIMTKAAVE 200
BLAST of DY270912 vs. ExPASy Swiss-Prot
Match: RL4_BACCZ (50S ribosomal protein L4 OS=Bacillus cereus (strain ZK / E33L) GN=rplD PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.155e-28 Identity = 73/195 (37.44%), Postives = 112/195 (57.44%), Query Frame = 3 Query: 153 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLXXXXXXXXXXXXENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 737 TG ++GE L + AV+ A++ + R+GT TR EVRGGGRKP+ QK TGRAR+GS R+P GGG VFGP PR ++ K+ KK +RL N +V+E D PKTK+ + ++ GL ++KA + + +E+VE S+RNI + ++T +N+ D+L + L++T + V+ Sbjct: 10 TGSQVGEIELAEAIFGIEPNEAVLFEAVMMQRASLRQGTHKVKTRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYAYKLPKKVRRLAIKSALATKVVENNIVVLE--DLVLNAPKTKDMLAVLK--GLTVEKKALIVTADANESVELSARNIPGVTVITADGVNVLDVLHHDKLIMTKAAVE 200
BLAST of DY270912 vs. ExPASy Swiss-Prot
Match: RL4_BACCR (50S ribosomal protein L4 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rplD PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.155e-28 Identity = 73/195 (37.44%), Postives = 112/195 (57.44%), Query Frame = 3 Query: 153 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLXXXXXXXXXXXXENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 737 TG ++GE L + AV+ A++ + R+GT TR EVRGGGRKP+ QK TGRAR+GS R+P GGG VFGP PR ++ K+ KK +RL N +V+E D PKTK+ + ++ GL ++KA + + +E+VE S+RNI + ++T +N+ D+L + L++T + V+ Sbjct: 10 TGSQVGEIELAEAIFGIEPNEAVLFEAVMMQRASLRQGTHKVKTRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYAYKLPKKVRRLAIKSALATKVVENNIVVLE--DLVLNAPKTKDMLAVLK--GLTVEKKALIVTADANESVELSARNIPGVTVITADGVNVLDVLHHDKLIMTKAAVE 200 The following BLAST results are available for this feature:
BLAST of DY270912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY270912 ID=DY270912; Name=DY270912; organism=Citrus clementina; type=EST; length=1171bpback to top |