DY270999

Overview
NameDY270999
Unique NameDY270999
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1348
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_STRGG (Chaperone protein dnaK OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=dnaK PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 9.751e-14
Identity = 38/62 (61.29%), Postives = 48/62 (77.42%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQDK 483
            + VGIDLGTTNS V+ +EGG+PT++TNAEG RTTPSVVA  K  + LV ++A R AV N D+
Sbjct:    3 RAVGIDLGTTNSVVSVLEGGEPTVITNAEGARTTPSVVAFAKNGEVLVGEVAKRQAVTNVDR 64          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_STRCO (Chaperone protein dnaK OS=Streptomyces coelicolor GN=dnaK PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 9.751e-14
Identity = 38/62 (61.29%), Postives = 48/62 (77.42%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQDK 483
            + VGIDLGTTNS V+ +EGG+PT++TNAEG RTTPSVVA  K  + LV ++A R AV N D+
Sbjct:    3 RAVGIDLGTTNSVVSVLEGGEPTVITNAEGARTTPSVVAFAKNGEVLVGEVAKRQAVTNVDR 64          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_CYACA (Chaperone protein dnaK OS=Cyanidium caldarium GN=dnaK PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 9.751e-14
Identity = 40/60 (66.67%), Postives = 46/60 (76.67%), Query Frame = 1
Query:  295 EKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVN 474
            EK+VGIDLGTTNS +A ME GKP ++ N+EG RTTPSVVA  K  D LV QIA R AV+N
Sbjct:    2 EKIVGIDLGTTNSVIAVMEMGKPAVIPNSEGFRTTPSVVAYAKNGDLLVGQIAKRQAVIN 61          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_CLOBB (Chaperone protein dnaK OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=dnaK PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 9.751e-14
Identity = 36/62 (58.06%), Postives = 48/62 (77.42%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQDK 483
            K++GIDLGTTNS VA MEGG+P ++TN+EG RTTPSVV+     ++LV Q+A R ++ N DK
Sbjct:    3 KIIGIDLGTTNSCVAVMEGGEPVVITNSEGARTTPSVVSFQADGERLVGQVAKRQSITNPDK 64          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_CLOBA (Chaperone protein dnaK OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 9.751e-14
Identity = 36/62 (58.06%), Postives = 48/62 (77.42%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQDK 483
            K++GIDLGTTNS VA MEGG+P ++TN+EG RTTPSVV+     ++LV Q+A R ++ N DK
Sbjct:    3 KIIGIDLGTTNSCVAVMEGGEPVVITNSEGARTTPSVVSFQADGERLVGQVAKRQSITNPDK 64          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_CLOAB (Chaperone protein dnaK OS=Clostridium acetobutylicum GN=dnaK PE=2 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 9.751e-14
Identity = 37/62 (59.68%), Postives = 47/62 (75.81%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQDK 483
            KV+GIDLGTTNS VA MEGG P ++ N+EG RTTPSVV+  K  ++LV Q+A R ++ N DK
Sbjct:    3 KVIGIDLGTTNSCVAVMEGGDPAVIANSEGARTTPSVVSFQKNGERLVGQVAKRQSITNPDK 64          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK1_STRAW (Chaperone protein dnaK1 OS=Streptomyces avermitilis GN=dnaK1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 9.751e-14
Identity = 38/62 (61.29%), Postives = 48/62 (77.42%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQDK 483
            + VGIDLGTTNS V+ +EGG+PT++TNAEG RTTPSVVA  K  + LV ++A R AV N D+
Sbjct:    3 RAVGIDLGTTNSVVSVLEGGEPTVITNAEGARTTPSVVAFAKNGEVLVGEVAKRQAVTNVDR 64          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_NOCSJ (Chaperone protein dnaK OS=Nocardioides sp. (strain BAA-499 / JS614) GN=dnaK PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.273e-13
Identity = 38/62 (61.29%), Postives = 47/62 (75.81%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQDK 483
            + VGIDLGTTNS VA +EGG+PT++ NAEG RTTPSVVA  K  + LV ++A R AV N D+
Sbjct:    3 RAVGIDLGTTNSVVAVLEGGEPTVIANAEGARTTPSVVAFAKSGEVLVGEVAKRQAVTNVDR 64          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_CLOPS (Chaperone protein dnaK OS=Clostridium perfringens (strain SM101 / Type A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.273e-13
Identity = 36/62 (58.06%), Postives = 48/62 (77.42%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQDK 483
            K++GIDLGTTNS VA MEGG+P ++TN+EG RTTPSVV+     ++LV Q+A R A+ N +K
Sbjct:    3 KIIGIDLGTTNSCVAVMEGGEPVVITNSEGARTTPSVVSFQANGERLVGQVAKRQAITNPEK 64          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_APHHA (Chaperone protein dnaK OS=Aphanothece halophytica GN=dnaK PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.273e-13
Identity = 37/61 (60.66%), Postives = 47/61 (77.05%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            KV+GIDLGTTNS  A +EGGKP ++ N EG RTTPS+VA TK +++LV Q+A R AV N +
Sbjct:    3 KVIGIDLGTTNSCFAVLEGGKPLVIENVEGGRTTPSIVAFTKEKERLVGQLAKRQAVTNAE 63          
The following BLAST results are available for this feature:
BLAST of DY270999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
DNAK_STRGG9.751e-1461.29Chaperone protein dnaK OS=Streptomyces griseus sub... [more]
DNAK_STRCO9.751e-1461.29Chaperone protein dnaK OS=Streptomyces coelicolor ... [more]
DNAK_CYACA9.751e-1466.67Chaperone protein dnaK OS=Cyanidium caldarium GN=d... [more]
DNAK_CLOBB9.751e-1458.06Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CLOBA9.751e-1458.06Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CLOAB9.751e-1459.68Chaperone protein dnaK OS=Clostridium acetobutylic... [more]
DNAK1_STRAW9.751e-1461.29Chaperone protein dnaK1 OS=Streptomyces avermitili... [more]
DNAK_NOCSJ1.273e-1361.29Chaperone protein dnaK OS=Nocardioides sp. (strain... [more]
DNAK_CLOPS1.273e-1358.06Chaperone protein dnaK OS=Clostridium perfringens ... [more]
DNAK_APHHA1.273e-1360.66Chaperone protein dnaK OS=Aphanothece halophytica ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YI09FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270999 ID=DY270999; Name=DY270999; organism=Citrus clementina; type=EST; length=1348bp
TACAAACCCTTATCTTCTCCACCAAAAGAAAGTCAACATTTTCACAGACC
CACAATCACAAACATGGCGACGTTTTCAACAACCCAAATTCACTCTCTGG
GTAACATTCCTTTGTCTTCAAGAAGGATTAAAGCCGCTAGTTTTCAATCA
TCCGCTCCGAGAACCGCCTTTTTCGGCCAAGCACTGGGCAGAAAACCGCA
TTTTGGCCTCCCAAACGCGGCTTTTTTGAAGTTAAACAATGAAAAAAACA
ATACTAGAAGAAGGTGTAACGTGGGTCCGGTGAGAGTGGTGAATGAGAAG
GTGGTGGGGATTGATTTGGGGACGACGAATTCGGCGGTGGCGGCGATGGA
AGGGGGGAAGCCGACGATAGTGACGAATGCCGAGGGGCAACGGACGACGC
CGTCTGTGGTTGCATAAACCAAGATTGAGGATAAGTTGGTGGCTCAAATT
GCCTACAGACTTGCAGTTGTGAACCAGGACAAAAACCCACAACCAAACAA
CAGAATCAAAGACAACAACCAACTCAATATGTAATAACCCATCTACAAGT
AATGAAAAGAGGAAGATGTTAAAACAGGATAACATTACACACATACATGA
AAACCGGAGCGACACAGCAACAACACACGAAAAGAGAATAAACTTCTAAA
AATAAAATAACAAATAATAAAAAACAAAATATCAACATCACTAAAAACAT
AACAAGAAAACATACCCACCAACATCAACACTTAAAACGCAAGTCAAAAA
ATAAAACCAGCATTCATTACACATCTTAACCGAACGATCCCAAGCACCCA
AAATCACCCATACCCTAAACTATATCCAAAATAAATTTACCAGAAAAGTC
ATGACACACCCAGCAAATACGAAAATCATAGTAAGCTATCTAAAACCACA
CCCCCCCAATATAGAAAAACTCACCTACCAGATTAACTACCATACCAAAA
ACGATACCTTCCTAACCCTTTTAAATACACAAACCACAAGAATCCCCTCT
ACAACACACCATGAGACTCTCAACAAAAACACAAGCCTCTATAACTAAGC
ATAAAACCCTAAAAACAACAAAGAGTATACCATCATCTATTATACAAACA
ATATATATAACAACAAATAATATGAAATATAAATAAATCTACAAACTCTA
AAAAATTGTTCACAACGACAGAATAATTTCAATACTACCACAGATCTATC
ATCAACCACCTTTATCAAAACTAGATCCAGCCTACCGAGACATATGCTCT
CTCAATCACTCTACACAAGCAAGACGATACATATGGAAGCAATACACAGT
CGAAAAGACGGCTTACATATCAAAATCGAGAAGACAACCAGCTATACT
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