DY271004

Overview
NameDY271004
Unique NameDY271004
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1207
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271004 vs. ExPASy Swiss-Prot
Match: INT2_ARATH (Probable inositol transporter 2 OS=Arabidopsis thaliana GN=INT2 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 9.292e-21
Identity = 61/206 (29.61%), Postives = 106/206 (51.46%), Query Frame = 1
Query:  124 PVVVLSTLVAICGSFAHGCSVGYSSPAESGMRAD---LGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIV-----SWRALALIAAVPCLLQVVGLVFIPKSPRWLAKIGKKKDIKLLYRTL 717
            P V+     A  G    G   G  S A   +R D   +  +     +  S+   G I+G+ + G   D  GRR A+ +++   ++G + +A + +   L +GR  +G+G+ + +   P+Y++E +P  IRGA  +TN FLI  G  + YL+         +WR +  IA +P LLQ V +  +P+SPRWL + G++++ K + R +
Sbjct:   26 PYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRNTWLQEMIVSMAVAGAIVGAAIGGWANDKLGRRSAILMADFLFLLGAIIMAAAPNPSLLVVGRVFVGLGVGMASMTAPLYISEASPAKIRGALVSTNGFLITGGQFLSYLINLAFTDVTGTWRWMLGIAGIPALLQFVLMFTLPESPRWLYRKGREEEAKAILRRI 231          
BLAST of DY271004 vs. ExPASy Swiss-Prot
Match: PLT3_ARATH (Probable polyol transporter 3 OS=Arabidopsis thaliana GN=PLT3 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.585e-20
Identity = 66/209 (31.58%), Postives = 103/209 (49.28%), Query Frame = 1
Query:   97 PGSD-NSSATPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYL-------VGTIVSWRALALIAAVPCLLQVVGLVFIPKSPRWLAKIGKKKDIK 699
            PGSD N           +VA   S   G   G  S A+  +R DL ++ TQ  V   +L    ++GSL  GK +DV GRR  + LS +  +VG + + +  +   L +GR   G+G+     + PVY AEI+  + RG  T+  +  I  G+ + Y+       +   + WR +  IAA P L+   G+  +P+SPRWL   G+ ++ K
Sbjct:   10 PGSDPNPHMNKFAFGCAIVASIISIIFGYDTGVMSGAQIFIRDDLKINDTQIEVLAGILNLCALVGSLTAGKTSDVIGRRYTIALSAVIFLVGSVLMGYGPNYPVLMVGRCIAGVGVGFALMIAPVYSAEISSASHRGFLTSLPELCISLGILLGYVSNYCFGKLTLKLGWRLMLGIAAFPSLILAFGITRMPESPRWLVMQGRLEEAK 218          
BLAST of DY271004 vs. ExPASy Swiss-Prot
Match: INT4_ARATH (Inositol transporter 4 OS=Arabidopsis thaliana GN=INT4 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.585e-20
Identity = 59/191 (30.89%), Postives = 99/191 (51.83%), Query Frame = 1
Query:  121 TPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRAD---LGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVG-----TIVSWRALALIAAVPCLLQVVGLVFIPKSPRWL 669
            TP ++   L A  G    G   G  S A   ++ D   +       S   S+   G I+G+ V G I D  GRR ++ ++++  ++G + +AF+   W + +GR  +G G+ + +   P+Y++E +P  IRGA  +TN  LI  G    YL+      T  +WR +  +A VP ++Q V ++ +P+SPRWL
Sbjct:   24 TPYIMRLALSAGIGGLLFGYDTGVISGALLFIKEDFDEVDKKTWLQSTIVSMAVAGAIVGAAVGGWINDKFGRRMSILIADVLFLIGAIVMAFAPAPWVIIVGRIFVGFGVGMASMTSPLYISEASPARIRGALVSTNGLLITGGQFFSYLINLAFVHTPGTWRWMLGVAGVPAIVQFVLMLSLPESPRWL 214          
BLAST of DY271004 vs. ExPASy Swiss-Prot
Match: GTR5_HORSE (Solute carrier family 2, facilitated glucose transporter member 5 OS=Equus caballus GN=SLC2A5 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.070e-20
Identity = 73/216 (33.80%), Postives = 116/216 (53.70%), Query Frame = 1
Query:  121 TPVVVLSTLVAICGS-FAHGCSVG-YSSPAE--------------SGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWS---LYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVG------TIVSWRALALIAAVPCLLQVVGLVFIPKSPRWLAKIGKKKD 693
            TPV+ L+TL+A  GS F +G +V   +SPAE              S   ++  L++  +S+  S+  FGG +GSL+ G + +  GR+G +  + +F IV  + +  SK   S   + L R  +GI   + + V+P+Y+ E++PKN+RGA     Q  I  G+ V  +VG      T   W  L  + A+P  LQ++ L F P+SPR+L  + +KKD
Sbjct:   14 TPVLALATLIAAFGSSFQYGYNVAAVNSPAELMKAFYNETHYSRFSEYISEFSLTLL-WSISVSMFPFGGFVGSLMVGPLVNRLGRKGTLLFNNIFSIVPAILMGTSKTARSYEMIILSRLLVGICAGLSSNVVPMYLGELSPKNLRGALGVVPQLFITVGILVAQIVGLRSLLATEEGWPILLGLTAIPAALQLLLLPFFPESPRYL--LIQKKD 226          
BLAST of DY271004 vs. ExPASy Swiss-Prot
Match: ITR1_YEAST (Myo-inositol transporter 1 OS=Saccharomyces cerevisiae GN=ITR1 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 2.703e-20
Identity = 58/199 (29.15%), Postives = 94/199 (47.24%), Query Frame = 1
Query:  109 NSSATPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYS---VFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVS-----WRALALIAAVPCLLQVVGLVFIPKSPRWLAKIG 681
            N S +P ++  T VA    F  G   GY S A   +  DL   V  Y    +  +  + G +I S+  G  AD+ GR+  +  S L  ++G +    +   W + +GR  +G G+ I + + P++++EI PK IRG  T  N   +  G  V Y  G  ++     WR L  ++ +P  +Q   L F+P +PR+    G
Sbjct:   79 NQSLSPFIITLTFVASISGFMFGYDTGYISSALISIGTDLDHKVLTYGEKEIVTAATSLGALITSIFAGTAADIFGRKRCLMGSNLMFVIGAILQVSAHTFWQMAVGRLIMGFGVGIGSLIAPLFISEIAPKMIRGRLTVINSLWLTGGQLVAYGCGAGLNYVNNGWRILVGLSLIPTAVQFTCLCFLPDTPRYYVMKG 277          
BLAST of DY271004 vs. ExPASy Swiss-Prot
Match: GTR5_SHEEP (Solute carrier family 2, facilitated glucose transporter member 5 OS=Ovis aries GN=SLC2A5 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 3.531e-20
Identity = 81/257 (31.52%), Postives = 129/257 (50.19%), Query Frame = 1
Query:  121 TPVVVLSTLVAICGS-FAHGCSVG-YSSPAES-------------GMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFS---KDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVG------TIVSWRALALIAAVPCLLQVVGLVFIPKSPRWLAKIGKKKDIKLLYRTLREKLQIFHGICRHPKLTQKF*KASKAGIFYSFLQ 819
            TPV+VL+TL+A  GS F +G +V   +SP+E              G   +       +SV  S+  FGG +GSL+ G + +  GR+G +  + +F IV  L + FS   K    + + R  +GI   + + V+P+Y+ E+ PKN RGA     Q  I  G+ V  + G          W  L  +  +P +LQ++ L F P+SPR+L  + +KKD +   R LR +L+ +H +    +   +  +A KA  F S L+
Sbjct:   14 TPVIVLATLIAAFGSSFQYGYNVATINSPSEFMKDFYNYTYYDRVGEYMNEFYLTLLWSVTVSMFPFGGFLGSLMVGPLVNNLGRKGTLLFNNIFSIVPALLMGFSDLAKSFEMIIVARVLVGICAGLSSNVVPMYLGELAPKNWRGALGVVPQLFITIGILVAQIFGLRSLLANEEGWPILLGLTGIPAVLQLLFLPFFPESPRYL--LIQKKDEEAAKRALR-RLRGWHDVDAEIEEILEEDRAEKAAGFISVLK 267          
BLAST of DY271004 vs. ExPASy Swiss-Prot
Match: GTR3_RAT (Solute carrier family 2, facilitated glucose transporter member 3 OS=Rattus norvegicus GN=Slc2a3 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 6.023e-20
Identity = 67/217 (30.88%), Postives = 107/217 (49.31%), Query Frame = 1
Query:  112 SSATPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADL--------------GLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSK---DVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVM------YLVGTIVSWRALALIAAVPCLLQVVGLVFIPKSPRWLAKIGKKKD 693
            +  TP +V +  VA  GSF  G + G  +  E+ ++  L              GL  T +S+  ++ + GG+IGS   G   +  GRR +M L  L  I+G   + F+K    V  L LGR  +GI   +    +P+Y+ E++P  +RGAF   NQ  I+ G+ V       +++G+   W  L  +  +P +LQ   L F P+SPR+L    K++D
Sbjct:    4 AKVTPSLVFAVTVATIGSFQFGYNTGVINAPETIIKDFLNYTLEERLEDLPREGLLTTLWSLCVAIFSVGGMIGSFSVGLFVNRFGRRNSMLLVNLIAILGGCLMGFAKIAESVEMLILGRLIIGIFCGLCTGFVPMYIGEVSPTALRGAFGTLNQLGIVVGILVAQVFGLDFILGSEELWPGLLGLTIIPAILQSAALPFCPESPRFLLINRKEED 220          
BLAST of DY271004 vs. ExPASy Swiss-Prot
Match: MYCT_HUMAN (Proton myo-inositol cotransporter OS=Homo sapiens GN=SLC2A13 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 1.027e-19
Identity = 60/207 (28.99%), Postives = 96/207 (46.38%), Query Frame = 1
Query:  121 TPVVVLSTLV-AICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVS------WRALALIAAVPCLLQVVGLVFIPKSPRWLAKIGKKKDIKLLYRTLR 720
            TP  V    V +  G F  G   G  S A   ++  L L      +  S       + +L  G +  V GRR A+ L+      G   +A + +  +L  GR  +G+G+ I +  +PVY+AE++P N+RG     N   I  G     +V    S      WR +  +AAVP ++Q  G +F+P+SPRWL + G+ +  + +   +R
Sbjct:   58 TPAFVYVVAVFSALGGFLFGYDTGVVSGAMLLLKRQLSLDALWQELLVSSTVGAAAVSALAGGALNGVFGRRAAILLASALFTAGSAVLAAANNKETLLAGRLVVGLGIGIASMTVPVYIAEVSPPNLRGRLVTINTLFITGGQFFASVVDGAFSYLQKDGWRYMLGLAAVPAVIQFFGFLFLPESPRWLIQKGQTQKARRILSQMR 264          
BLAST of DY271004 vs. ExPASy Swiss-Prot
Match: XYLT_LACBR (D-xylose-proton symporter OS=Lactobacillus brevis GN=xylT PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.342e-19
Identity = 57/197 (28.93%), Postives = 99/197 (50.25%), Query Frame = 1
Query:  160 GSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLV-----GTIVSWRALALIAAVPCLLQVVGLVFIPKSPRWLAKIGKKKDIKLLYRTLREKLQI 735
            G    G   G  S A   ++  + L   Q     S +  G I+G+ + G  +D  GRR  + LS +   VG L  AFS + W+L + R  LG+ +   + +IP Y+AE+ P + RG  ++  Q ++++G+ + Y+      G    WR +   AA+P  L  +G + +P+SPR+L K G   + + +  T+ +  Q+
Sbjct:   16 GGLLFGYDTGVISGAILFIQKQMNLGSWQQGWVVSAVLLGAILGAAIIGPSSDRFGRRKLLLLSAIIFFVGALGSAFSPEFWTLIISRIILGMAVGAASALIPTYLAELAPSDKRGTVSSLFQLMVMTGILLAYITNYSFSGFYTGWRWMLGFAAIPAALLFLGGLILPESPRFLVKSGHLDEARHVLDTMNKHDQV 212          
BLAST of DY271004 vs. ExPASy Swiss-Prot
Match: IOLT_BACSU (Major myo-inositol transporter iolT OS=Bacillus subtilis GN=iolT PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.342e-19
Identity = 55/205 (26.83%), Postives = 101/205 (49.27%), Query Frame = 1
Query:  145 LVAICGSFAHGCSVGYSSPA--ESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVS---------WRALALIAAVPCLLQVVGLVFIPKSPRWLAKIGKKKDIKLLYRTLREK 726
            LV+  G    G   G  + A    G    L L+     +  S L FG  +G++  G+++D  GRR  +    +   +  +   F+ +V  + + RF LGI +   +  +P Y+AE++P   RG     N+ +I+SG  + ++   I+          WR + +IA++P L    G++ +P+SPRWL   G+K+D   + + +R++
Sbjct:   16 LVSTFGGLLFGYDTGVLNGALPYMGEPDQLNLNAFTEGLVTSSLLFGAALGAVFGGRMSDFNGRRKNILFLAVIFFISTIGCTFAPNVTVMIISRFVLGIAVGGASVTVPAYLAEMSPVESRGRMVTQNELMIVSGQLLAFVFNAILGTTMGDNSHVWRFMLVIASLPALFLFFGMIRMPESPRWLVSKGRKEDALRVLKKIRDE 220          
The following BLAST results are available for this feature:
BLAST of DY271004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
INT2_ARATH9.292e-2129.61Probable inositol transporter 2 OS=Arabidopsis tha... [more]
PLT3_ARATH1.585e-2031.58Probable polyol transporter 3 OS=Arabidopsis thali... [more]
INT4_ARATH1.585e-2030.89Inositol transporter 4 OS=Arabidopsis thaliana GN=... [more]
GTR5_HORSE2.070e-2033.80Solute carrier family 2, facilitated glucose trans... [more]
ITR1_YEAST2.703e-2029.15Myo-inositol transporter 1 OS=Saccharomyces cerevi... [more]
GTR5_SHEEP3.531e-2031.52Solute carrier family 2, facilitated glucose trans... [more]
GTR3_RAT6.023e-2030.88Solute carrier family 2, facilitated glucose trans... [more]
MYCT_HUMAN1.027e-1928.99Proton myo-inositol cotransporter OS=Homo sapiens ... [more]
XYLT_LACBR1.342e-1928.93D-xylose-proton symporter OS=Lactobacillus brevis ... [more]
IOLT_BACSU1.342e-1926.83Major myo-inositol transporter iolT OS=Bacillus su... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YI14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271004 ID=DY271004; Name=DY271004; organism=Citrus clementina; type=EST; length=1207bp
CCAGAAAGCTTGGAGGAGGGACTAATAGCAAAGTCTTCACTTGCTCAGCC
AAATCCTATAAAAATTACAAATGAAGTTGGTGAGCGCAGTGGCTTGCCAG
GGAGTGACAATTCTTCAGCTACACCCGTTGTTGTTCTTAGCACCTTGGTA
GCCATATGTGGTTCATTTGCTCATGGCTGTTCTGTTGGATATTCATCACC
TGCTGAGTCTGGAATGAGGGCAGACCTGGGACTCTCAGTGACACAATACT
CAGTTTTTGGTTCAGTATTGACATTTGGAGGAATAATAGGTTCATTAGTA
AATGGGAAAATAGCAGACGTCACTGGTCGAAGAGGTGCAATGTGGCTTTC
TGAGTTATTCTGTATTGTTGGGTGGCTGGCAATAGCATTCTCAAAGGATG
TTTGGTCACTATATCTTGGACGATTTTCTCTTGGGATTGGACTTGCAATT
ATTGCTTATGTGATACCAGTATATGTCGCAGAAATAACACCCAAGAACAT
CCGGGGAGCATTTACAGCTACTAATCAGTTCTTGATTATATCTGGTATGT
CAGTAATGTATTTGGTGGGTACTATTGTTTCCTGGCGAGCCCTGGCTCTA
ATTGCTGCTGTTCCATGTCTGTTGCAAGTTGTTGGTTTGGTCTTCATTCC
AAAATCACCAAGATGGCTGGCGAAAATTGGTAAAAAAAAAGACATAAAGC
TACTCTACCGAACCCTTAGGGAAAAACTGCAAATATTTCATGGAATCTGC
CGACATCCAAAATTAACCCAAAAATTTTAAAAAGCCTCGAAAGCCGGAAT
TTTTTATTCTTTTTTACAAAAAAAACCTTTTCCCTCCCCTTTGGTATTGA
AATAAGGAAATGGAACCATATACTGCAACACAGCACATTGCTTATTTCGC
CCACATAACATTTGCATTCCTTGTCTTTTTACAAATCTTTAGGAGGAAAT
CAATATGTAACATCCACCCTTCGCGTAGTGAAAGGCCCACCCTATAAAAA
ATAAATTATTTAAAAATAACCACATAACTCTGCAAGACGGCCATATACAT
AAAAAAAATATCAAAACACTAACTAATAGAGATAAAAGTGCACGATCAGA
CCGCACACAGTGGTGAGTTTGAAAAAACTCAGCAACCAGGACCATTATTA
TTGTCATAGATCTAATACAAAATTAAAACACCAAGGAGAAACTAAAATAG
TATATAG
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