DY271014
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271014 vs. ExPASy Swiss-Prot
Match: EFTU_CYAP4 (Elongation factor Tu OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=tuf PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 8.322e-25 Identity = 76/261 (29.12%), Postives = 131/261 (50.19%), Query Frame = 1 Query: 88 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG------FEGDNMIERSTHLDWY-KGPTLLDALDN-INEPKRPSNKPLSLPLQEVYKMVGLETSQWGAL 846 + K H+NI IGHVD GK+T T + L + + ++++ +D E+ RGITI+ A ++ETT+ + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK+D + + + E+ L ++ + +P + SG G+ +R + +W K L+DA+D+ I P+R +KP + +++V+ + G T G + Sbjct: 8 RNKPHVNIGTIGHVDHGKTTLTAAITMTLAALGQAAARKYDE---------------IDAAPEEKARGITINTAHVEYETTQRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGAMP-------QTKEHILLAKQVGVPSIVVFLNKVDQLD---DEELLELVELELRELLTSYDFDGDNIPIIRGSGLMALEAMTGNPKTQRGDN-EWVDKIYELMDAVDSYIPTPERDVDKPFLMAVEDVFSITGRGTVATGRI 242
BLAST of DY271014 vs. ExPASy Swiss-Prot
Match: EFTU_PROM3 (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9303) GN=tuf PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.087e-24 Identity = 77/255 (30.20%), Postives = 124/255 (48.63%), Query Frame = 1 Query: 88 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEG-DNMIERSTHLDWYKGPTLLDALD-NINEPKRPSNKPLSLPLQEVYKMVGLETSQWGAL 846 + K H+NI IGHVD GK+T T + L + ++ + + +D ERERGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+ +T G QT+EH LLA +GV ++ NK D + + + E+ L + + +P V +SG + + E +D L+DA+D +I EP+R KP + +++V+ + G T G + Sbjct: 8 RNKPHVNIGTIGHVDHGKTTLTAAITSVLAKKGQAKVQDYAE---------------IDGAPEERERGITINTAHVEYETDGRHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGPM-------AQTKEHILLAKQVGVPALVVALNKCDMVD---DEEIIELVEMEIRELLSSYDFPGDDIPIVQVSGLKAIEGEAEWEAKID-----ELMDAVDTSIPEPEREIEKPFLMAVEDVFSITGRGTVATGRI 232
BLAST of DY271014 vs. ExPASy Swiss-Prot
Match: EFTU_GEOUR (Elongation factor Tu OS=Geobacter uraniireducens (strain Rf4) GN=tuf1 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.087e-24 Identity = 79/255 (30.98%), Postives = 123/255 (48.24%), Query Frame = 1 Query: 88 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTHLDWYKGPTLLDALDN-INEPKRPSNKPLSLPLQEVYKMVGLETSQWG 840 + K H+NI IGHVD GK+T T + L G + + F++ +D ERERGITI A ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + + E+ L + + +P + + EGD + L L++A+D+ I EP R +KP +P+++V+ + G T G Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAITKVLAGKGQAEFKAFDQ---------------IDNAPEERERGITIATAHVEYETDKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKADMVD---DEELLELVELEIRELLSSYDFPGDDIPIIKGSALKALEGD-----TGELGEQAIMKLMEAVDSYIPEPVRAIDKPFLMPVEDVFSISGRGTVATG 232
BLAST of DY271014 vs. ExPASy Swiss-Prot
Match: EFTU_FRAAA (Elongation factor Tu OS=Frankia alni (strain ACN14a) GN=tuf PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.087e-24 Identity = 80/254 (31.50%), Postives = 123/254 (48.43%), Query Frame = 1 Query: 88 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTHLDWYKGPTLLDAL----DNINEPKRPSNKPLSLPLQEVYKMVGLET 828 + K H+NI IGH+D GK+T T + L A + F +DK E+ RGITI IA +++T K + +D PGH D+IKNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + + + EV L + + VP + +S EGD +W G LL+ + D+I EP+R ++P +P+++V+ + G T Sbjct: 8 RTKPHVNIGTIGHIDHGKTTLTAAITKVL-------------HDAHPDLNPFTPFDQIDKAPEEKARGITISIAHVEYQTDKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSATDGPMP-------QTKEHVLLARQVGVPYIVVALNKADMVD---DEEILELVELEVRELLSSYEFPGDDVPVIRVSALKALEGDK--------EW--GAKLLELMAAVDDSIPEPQRDIDRPFLMPIEDVFTITGRGT 228
BLAST of DY271014 vs. ExPASy Swiss-Prot
Match: EFTU_DESDG (Elongation factor Tu OS=Desulfovibrio desulfuricans (strain G20) GN=tuf PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.087e-24 Identity = 86/257 (33.46%), Postives = 129/257 (50.19%), Query Frame = 1 Query: 82 MGKEK-----THINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTHLDWYKGP--TLLDALDN-INEPKRPSNKPLSLPLQEVYKMVGLET 828 MGKEK H+NI IGH+D GK+T T I K+ + +M ++ Y + DK E+ERGITI A ++ETT + +D PGH D+IKNMITG +Q D A++++ +T G QTREH LLA +GV ++ NK D + + + EV L + + P + S + +E + D P LLDA D+ I EP+R ++KP +P+++V+ + G T Sbjct: 1 MGKEKFERTKPHVNIGTIGHIDHGKTTLTA-AITKIASL-------------KMGSKAVAYDEI-DKAPEEKERGITIATAHVEYETTLRHYAHVDCPGHADYIKNMITGAAQMDGAIIVVAATDGPMP-------QTREHILLARQVGVPSIVVFLNKCDMVD---DEELLELVELEVRELLSSYDFPGDDTPVIRGSALKA---LECDSADDDAAKPILELLDACDSYIPEPERDTDKPFLMPIEDVFSISGRGT 229
BLAST of DY271014 vs. ExPASy Swiss-Prot
Match: EFTU_DESDA (Elongation factor Tu OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=tuf PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.087e-24 Identity = 88/260 (33.85%), Postives = 124/260 (47.69%), Query Frame = 1 Query: 82 MGKEK-----THINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD--NMIERSTHLDWYKGPTLLDALDN-INEPKRPSNKPLSLPLQEVYKMVGLET 828 MGKEK H+NI IGH+D GK+T T + K A + F +DK E+ERGITI + ++ET K + +D PGH D+IKNMITG +Q D +L++ +T G QTREH LLA +GV Q++ NK D + + + EV L + + VP + + E D N E LD LLDA D+ I EP R +KP +P+++V+ + G T Sbjct: 1 MGKEKFERKKPHVNIGTIGHIDHGKTTLTAAIT---------------KVANLKSGGKFISYDEIDKAPEEKERGITIATSHVEYETDKRHYAHVDCPGHADYIKNMITGAAQMDGGILVVAATDGPMP-------QTREHILLARQVGVPQLVVFLNKCDLVD---DEELLELVELEVRELLSSYDFPGDDVPVIRGSALKALESDDPNSAEAKCILD------LLDACDSFIPEPVRDIDKPFLMPIEDVFSISGRGT 229
BLAST of DY271014 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBM (Elongation factor Tu OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=tuf1 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.087e-24 Identity = 80/256 (31.25%), Postives = 129/256 (50.39%), Query Frame = 1 Query: 88 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTHLDWYKGPTLLDALDN-INEPKRPSNKPLSLPLQEVYKMVGLETSQWG 840 + K H+NI IGHVD GK+T T + L +K A K +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D + E+V+ EV L + G+ + P V + E + E++ +D L++A+D+ I P+R +++P +P+++V+ + G T G Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLA----------QKGGASATKYD-----EIDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD----QVDDPELIELVEMEVRELLNEYGFPGDDTPIVVGSALEVLENQDNAEKTKCID-----ELMEAIDSYIPTPERATDQPFLMPVEDVFTITGRGTVATG 232
BLAST of DY271014 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBL (Elongation factor Tu OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=tuf1 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.087e-24 Identity = 80/256 (31.25%), Postives = 129/256 (50.39%), Query Frame = 1 Query: 88 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTHLDWYKGPTLLDALDN-INEPKRPSNKPLSLPLQEVYKMVGLETSQWG 840 + K H+NI IGHVD GK+T T + L +K A K +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D + E+V+ EV L + G+ + P V + E + E++ +D L++A+D+ I P+R +++P +P+++V+ + G T G Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLA----------QKGGASATKYD-----EIDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD----QVDDPELIELVEMEVRELLNEYGFPGDDTPIVVGSALEVLENQDNAEKTKCID-----ELMEAIDSYIPTPERATDQPFLMPVEDVFTITGRGTVATG 232
BLAST of DY271014 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBK (Elongation factor Tu OS=Clostridium botulinum (strain Okra / Type B1) GN=tuf1 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.087e-24 Identity = 80/256 (31.25%), Postives = 129/256 (50.39%), Query Frame = 1 Query: 88 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTHLDWYKGPTLLDALDN-INEPKRPSNKPLSLPLQEVYKMVGLETSQWG 840 + K H+NI IGHVD GK+T T + L +K A K +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D + E+V+ EV L + G+ + P V + E + E++ +D L++A+D+ I P+R +++P +P+++V+ + G T G Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLA----------QKGGASATKYD-----EIDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD----QVDDPELIELVEMEVRELLNEYGFPGDDTPIVVGSALEVLENQDNAEKTKCID-----ELMEAIDSYIPTPERATDQPFLMPVEDVFTITGRGTVATG 232
BLAST of DY271014 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBH (Elongation factor Tu OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=tuf1 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.087e-24 Identity = 80/256 (31.25%), Postives = 129/256 (50.39%), Query Frame = 1 Query: 88 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTHLDWYKGPTLLDALDN-INEPKRPSNKPLSLPLQEVYKMVGLETSQWG 840 + K H+NI IGHVD GK+T T + L +K A K +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D + E+V+ EV L + G+ + P V + E + E++ +D L++A+D+ I P+R +++P +P+++V+ + G T G Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLA----------QKGGASATKYD-----EIDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD----QVDDPELIELVEMEVRELLNEYGFPGDDTPIVVGSALEVLENQDNAEKTKCID-----ELMEAIDSYIPTPERATDQPFLMPVEDVFTITGRGTVATG 232 The following BLAST results are available for this feature:
BLAST of DY271014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY271014 ID=DY271014; Name=DY271014; organism=Citrus clementina; type=EST; length=1227bpback to top |