DY271019

Overview
NameDY271019
Unique NameDY271019
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length818
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271019 vs. ExPASy Swiss-Prot
Match: DAPL_LACRD (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus reuteri (strain DSM 20016) GN=dapL PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.056e-21
Identity = 63/178 (35.39%), Postives = 95/178 (53.37%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSRETDPLDSQVVTVAKFSGRWAINVIPKLVLIGRTFPGLFKGKLHAT*ANLLRKVFLGPTC 525
            +T+ LG      EH+ +    ++  FQPAEE   G  +  E G+     K +  +GLH +P+LP G +  R G L AG+      + GKGGHAA PQ++ D ++AA+++I+ +Q ++SR  DP+ S V+T+ K  G    NVI     I  T  GL +  +  T  N L+ V  G  C
Sbjct:  104 MTVALGVLNYFSEHQPQ--DNILFFFQPAEESENGGKRAYELGLFSGKWKPDEFYGLHDNPDLPAGAIGCRMGTLFAGTTEVNIDLNGKGGHAAYPQNANDTVVAAASLILQVQTVISRSIDPIQSGVITLGKIDGGTIRNVIAGHTRIEGTIRGLTQTMIE-TIDNRLKDVCEGIGC 278          
BLAST of DY271019 vs. ExPASy Swiss-Prot
Match: DAPL_GEOSW (Putative N-acetyldiaminopimelate deacetylase OS=Geobacillus sp. (strain WCH70) GN=dapL PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.056e-21
Identity = 55/142 (38.73%), Postives = 86/142 (60.56%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSRETDPLDSQVVTVAKFSGRWAINVI 420
            +++ LG      EH   ++  ++ +FQPAEEG GGA  +LE+ +++  K + I  LH+ P  P+G +A++ G L A +      + GKGGHAA P  + D ++AA +++  LQ +V+R  DPLDS V+T+ K SG    NVI
Sbjct:  101 MSIALGLLTHFAEH--PIQDDLLFIFQPAEEGPGGAKPMLESEIMKVWKPDMILALHIAPEYPVGTIATKEGLLFANTSELFIDLKGKGGHAAFPHLANDMVVAACSLVTQLQSIVARNVDPLDSAVITIGKISGGTVQNVI 240          
BLAST of DY271019 vs. ExPASy Swiss-Prot
Match: DAPL_OENOB (Putative N-acetyldiaminopimelate deacetylase OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=dapL PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.380e-21
Identity = 56/143 (39.16%), Postives = 85/143 (59.44%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKV---NAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSRETDPLDSQVVTVAKFSGRWAINVI 420
            +T+ LG      +H+   K  +++ FQPAEE   G  +  +AG  +     +  + LHV+P LP G++ASR G L AGS        GK GHAA PQ++ D I+AA+N + ++Q +VSR  DP++  VVT+ KF+   A+N+I
Sbjct:  104 MTVALGILSYFAKHQP--KDNLLVFFQPAEENEFGGKRFYDAGGFQGEYLPDEFYALHVNPQLPAGQIASRKGTLFAGSNELRISFIGKSGHAAYPQNAKDSIVAAANFVTNVQTVVSRNVDPIEGGVVTIGKFNAGKAMNII 244          
BLAST of DY271019 vs. ExPASy Swiss-Prot
Match: DAPL_BACP2 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus pumilus (strain SAFR-032) GN=dapL PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.380e-21
Identity = 54/127 (42.52%), Postives = 79/127 (62.20%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIF--GLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSRETDPLDSQVVTVAKFSGRWAINVI 420
            E +K  ++ +FQPAEEG GGA  +L + VL+K    F   LH+ P  P+G +A++PG L A +      + GKGGHAA P  + D ++AAS ++  LQ ++SR  DPLDS V+T+   +G  A N+I
Sbjct:  114 EPIKEDLLFMFQPAEEGPGGAEPMLTSDVLKKWTPDFITALHIAPEYPVGTIATKPGLLFANTSELVIDLEGKGGHAAYPHLANDMVVAASALVGQLQSVISRNVDPLDSAVITIGTITGGTAQNII 240          
BLAST of DY271019 vs. ExPASy Swiss-Prot
Match: DAPL_BACCR (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=dapL PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.380e-21
Identity = 55/138 (39.86%), Postives = 83/138 (60.14%), Query Frame = 1
Query:   13 LGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSRETDPLDSQVVTVAKFSGRWAINVI 420
            +G   + +   E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P   +G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+T+ K +G    N+I
Sbjct:  102 IGLGLLTKAVSERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYAVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGKITGGTVQNII 239          
BLAST of DY271019 vs. ExPASy Swiss-Prot
Match: DAPL_BACC4 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain B4264) GN=dapL PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.380e-21
Identity = 55/138 (39.86%), Postives = 83/138 (60.14%), Query Frame = 1
Query:   13 LGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSRETDPLDSQVVTVAKFSGRWAINVI 420
            +G   + +   E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P   +G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+T+ K +G    N+I
Sbjct:  102 IGLGLLTKAVSERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYAVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGKITGGTVQNII 239          
BLAST of DY271019 vs. ExPASy Swiss-Prot
Match: DAPL_BACC2 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain G9842) GN=dapL PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.380e-21
Identity = 55/138 (39.86%), Postives = 83/138 (60.14%), Query Frame = 1
Query:   13 LGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSRETDPLDSQVVTVAKFSGRWAINVI 420
            +G   + +   E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P   +G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+T+ K +G    N+I
Sbjct:  102 IGLGLLTKAVSERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYAVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGKITGGTVQNII 239          
BLAST of DY271019 vs. ExPASy Swiss-Prot
Match: DAPL_LEUMM (Putative N-acetyldiaminopimelate deacetylase OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=dapL PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.354e-21
Identity = 57/161 (35.40%), Postives = 90/161 (55.90%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSRETDPLDSQVVTVAKFSGRWAINVIPKLVLIGRTFPGLFKGKL 474
            +++ LG  +   EH+   K  +++ FQPAEE   G    ++ G+ E     +  +G+H  PNLP G +++  G L AG+   E  I G+GGHAA P    DPI+ ++ +I+ LQ +VSR+ DP++  VV++   SG +  NVIP  V +  T   + K  L
Sbjct:  105 MSLALGLVQYFSEHQP--KDNLIVFFQPAEESKSGGKLAVDLGIFEGEWHPDEFYGIHDQPNLPAGTLSTLAGTLFAGTAELEIDIHGQGGHAAYPHLGKDPIVISAELIMLLQTVVSRDVDPIEGGVVSLGMISGGFTNNVIPDTVHLAGTVRSMTKDGL 263          
BLAST of DY271019 vs. ExPASy Swiss-Prot
Match: DAPL_LEUCK (Putative N-acetyldiaminopimelate deacetylase OS=Leuconostoc citreum (strain KM20) GN=dapL PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.074e-21
Identity = 56/147 (38.10%), Postives = 85/147 (57.82%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSRETDPLDSQVVTVAKFSGRWAINVIPKLV 432
            +TM LG A+   +H+   K  +++ FQPAEE   G     + G+ E   + +  +G+H  PNLP G +++  G L AG+   +  + G GGHAA P  + DPI+ A+ +I+ LQ +VSR  DP+   VV+V   +G +A NVIP  V
Sbjct:  106 MTMALGLAQYFSQHQP--KDNLIIFFQPAEEAESGGKVAYDMGLFEGKWRPDEFYGIHDQPNLPAGTLSTLAGTLFAGTAELKVDVIGTGGHAAYPHLAKDPIVIAAELIIQLQTVVSRSVDPIAGGVVSVGVINGGFANNVIPDQV 250          
BLAST of DY271019 vs. ExPASy Swiss-Prot
Match: DAPL_GEOKA (Putative N-acetyldiaminopimelate deacetylase OS=Geobacillus kaustophilus GN=dapL PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.074e-21
Identity = 53/125 (42.40%), Postives = 77/125 (61.60%), Query Frame = 1
Query:   52 LKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSRETDPLDSQVVTVAKFSGRWAINVI 420
            LK  ++ VFQPAEEG GGA  +LE+ ++   K + I  LH+ P  P+G +A++ G L A +      + GKGGHAA P  + D ++AA  ++  LQ +V+R  DPLDS V+T+ K +G    NVI
Sbjct:  116 LKDDLLFVFQPAEEGPGGAKPMLESDIMREWKPDIIVALHIAPEYPVGTIATKEGLLFANTSELFIDLKGKGGHAAFPHLANDMVVAACALVTQLQSIVARNVDPLDSAVITIGKIAGGTVQNVI 240          
The following BLAST results are available for this feature:
BLAST of DY271019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
DAPL_LACRD1.056e-2135.39Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_GEOSW1.056e-2138.73Putative N-acetyldiaminopimelate deacetylase OS=Ge... [more]
DAPL_OENOB1.380e-2139.16Putative N-acetyldiaminopimelate deacetylase OS=Oe... [more]
DAPL_BACP21.380e-2142.52Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACCR1.380e-2139.86Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACC41.380e-2139.86Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACC21.380e-2139.86Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_LEUMM2.354e-2135.40Putative N-acetyldiaminopimelate deacetylase OS=Le... [more]
DAPL_LEUCK3.074e-2138.10Putative N-acetyldiaminopimelate deacetylase OS=Le... [more]
DAPL_GEOKA3.074e-2142.40Putative N-acetyldiaminopimelate deacetylase OS=Ge... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YJ11FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271019 ID=DY271019; Name=DY271019; organism=Citrus clementina; type=EST; length=818bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AACTGACCCACTTGATTCACAGGTCGTGACAGTTGCAAAATTTTCAGGAA
GGTGGGCCATCAATGTCATTCCCAAATTAGTATTAATTGGAAGGACTTTC
CCGGGCCTTTTCAAGGGAAAGCTTCACGCAACTTAAGCCAACTTATTGAG
GAAGGTATTCCTTGGGCCAACCTGCATTACAAAAAAATGCCGGGCAACGG
GTTTATTTTCCCGTTAAAAAAAAAACCCCTTTTTCCCTCCCCCCACAAAA
CAAAAAACAATTTTGCACAAAAAACTTTTCAAAAGTTTTGCGGGGGAAAA
TTATGTTTTGAAAATCCCCAAAAAAGTTTAAAGGGTTTTTGGGCCCCCCC
ATGTGGGGGGGGATCTCGATAAAAATATTTATTTCTCTTTTTTTTTCACC
AAAAAAAAATAAAAACATGTCGGGGGGCGGTAGAAAAATCTCTTTCTTTC
CTTCCCTCTCTCCCCCGG
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