DY271065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271065 vs. ExPASy Swiss-Prot
Match: GCSP_RHIL3 (Glycine dehydrogenase [decarboxylating] OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=gcvP PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 1.090e-45 Identity = 92/175 (52.57%), Postives = 122/175 (69.71%), Query Frame = 3 Query: 330 KPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFNIASNCHPQ 854 +P D RRH +P + M +++G ++LD LIDAT+P SIR + + +TE + ++ +++ A+ NKV S IG GYY T PPVI RNI+ENPAWYT YTPYQ EI+QGRLE+LLN+QTMI DLTGL ++NASLLDE TAAAE MA+ + K K K F + ++CHPQ Sbjct: 13 QPYDFANRRHIGPSPAEMTDMLKVIGYNSLDGLIDATLPPSIRQKAPLV--WGAPMTEREALDKLRETANKNKVLVSLIGQGYYGTITPPVIQRNILENPAWYTAYTPYQPEISQGRLEALLNYQTMICDLTGLDVANASLLDEATAAAEGMAIAERVAKSKAKAFFVDADCHPQ 185
BLAST of DY271065 vs. ExPASy Swiss-Prot
Match: GCSP_DICDI (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Dictyostelium discoideum GN=gcvP PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 1.090e-45 Identity = 95/181 (52.49%), Postives = 125/181 (69.06%), Query Frame = 3 Query: 339 DTFARRHNSATPEDQAKMSELVGL--------DNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKK-TFNIASNCHPQ 854 DTF +RH + +M + + ++L+ LI+ T+PK IR++ + ++ + E+Q+++ ++K+A NKVY+SFIGMGYY T P VI RNI+ENP WYT YTPYQAEI+QGRLESLLNFQTM+++ TGLPMSNASLLDE TAAAEAM MC NI K K F + CHPQ Sbjct: 32 DTFPKRHIGPNENEINEMLKSINTSKLSKKNPNSLEQLIEYTIPKDIRLNRELNIEENKVIGENQLLKDLKKIAEKNKVYRSFIGMGYYGTITPHVIQRNILENPGWYTPYTPYQAEISQGRLESLLNFQTMVSEFTGLPMSNASLLDEATAAAEAMQMCVNISKSKGPFAFLVDKYCHPQ 212
BLAST of DY271065 vs. ExPASy Swiss-Prot
Match: GCSP_RHOSK (Glycine dehydrogenase [decarboxylating] OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=gcvP PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 1.424e-45 Identity = 92/169 (54.44%), Postives = 119/169 (70.41%), Query Frame = 3 Query: 351 RRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEG-LTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFNIASNCHPQ 854 RRH +P + +M +VG+ +LD LI+ TVP SIR ++ D L E +++ M+++A+ N+V S IG GYY T PP I RNI+ENPAWYT YTPYQ EIAQGRLE+LLN+QTM+ADLTGLP++NASLLDE TAAAEAM M K K + F + ++CHPQ Sbjct: 16 RRHIGPSPSEMEEMLRVVGVSSLDQLIEETVPASIRQET----PLDWAPLAEHELLARMREVAAKNRVMTSLIGQGYYGTVTPPAIQRNILENPAWYTAYTPYQPEIAQGRLEALLNYQTMVADLTGLPVANASLLDEATAAAEAMTMAERASKSKARAFFVDADCHPQ 180
BLAST of DY271065 vs. ExPASy Swiss-Prot
Match: GCSP_RHOS4 (Glycine dehydrogenase [decarboxylating] OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=gcvP PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 1.424e-45 Identity = 92/169 (54.44%), Postives = 119/169 (70.41%), Query Frame = 3 Query: 351 RRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEG-LTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFNIASNCHPQ 854 RRH +P + +M +VG+ +LD LI+ TVP SIR ++ D L E +++ M+++A+ N+V S IG GYY T PP I RNI+ENPAWYT YTPYQ EIAQGRLE+LLN+QTM+ADLTGLP++NASLLDE TAAAEAM M K K + F + ++CHPQ Sbjct: 16 RRHIGPSPSEMEEMLRVVGVSSLDQLIEETVPASIRQET----PLDWAPLAEHELLARMREVAAKNRVMTSLIGQGYYGTVTPPAIQRNILENPAWYTAYTPYQPEIAQGRLEALLNYQTMVADLTGLPVANASLLDEATAAAEAMTMAERASKSKARAFFVDADCHPQ 180
BLAST of DY271065 vs. ExPASy Swiss-Prot
Match: GCSP_RHIME (Glycine dehydrogenase [decarboxylating] OS=Rhizobium meliloti GN=gcvP PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 1.424e-45 Identity = 94/175 (53.71%), Postives = 121/175 (69.14%), Query Frame = 3 Query: 330 KPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFNIASNCHPQ 854 KP D RRH +P + +M ++VG +LD+LID TVP SIR + + +TE + ++ +++ A+ N+ S IG GYY T PPVI RNI+ENPAWYT YTPYQ EI+QGRLE+LLN+QTM+ DLTGL ++NASLLDE TAAAEAMA+ + K K K F I NCHPQ Sbjct: 13 KPYDFANRRHIGPSPAEMDEMLKVVGYPSLDALIDDTVPPSIRQRTPL--AWGAPMTEREALDKLRETANRNRKLVSLIGQGYYGTITPPVIQRNILENPAWYTAYTPYQPEISQGRLEALLNYQTMVCDLTGLDVANASLLDEATAAAEAMAIAERVAKSKAKAFFIDENCHPQ 185
BLAST of DY271065 vs. ExPASy Swiss-Prot
Match: GCSP_BURTA (Glycine dehydrogenase [decarboxylating] OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=gcvP PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 1.424e-45 Identity = 91/182 (50.00%), Postives = 125/182 (68.68%), Query Frame = 3 Query: 312 ISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIR-IDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFNIASNCHPQ 854 +S+ AL+ D FA RH Q M + +G +LIDA +P SIR +++ F + L+E++ + +++LA N+V++S+IG GYY+TH P VILRN++ENPAWYT YTPYQ EI+QGRLE+LLNFQ M+ADLTGL +SNASLLDE TAAAEAM + + K + F +A + PQ Sbjct: 15 LSLAALETHDAFAERHIGPDAASQQAMLDTLGFATRAALIDAVIPASIRRAETLPLGPFAQPLSEAEALAALRELADKNQVFRSYIGQGYYDTHTPAVILRNVLENPAWYTAYTPYQPEISQGRLEALLNFQQMVADLTGLEISNASLLDEATAAAEAMTLLQRVGKPQSNVFYVADDVLPQ 196
BLAST of DY271065 vs. ExPASy Swiss-Prot
Match: GCSP_ALISL (Glycine dehydrogenase [decarboxylating] OS=Aliivibrio salmonicida (strain LFI1238) GN=gcvP PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 1.424e-45 Identity = 90/179 (50.28%), Postives = 117/179 (65.36%), Query Frame = 3 Query: 318 VEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFNIASNCHPQ 854 ++ L + F RRHN M VG + L+ LI+ TVP SIR+ + GL+E+ M+ ++++A N + S+IG GYYNTH P VILRN+ ENP WYT YTPYQ EI+QGRLE+LLN+Q M+ DLTGL ++NASLLDE TAAAEAM +C K K TF +A + HPQ Sbjct: 5 LQQLGTDNEFIRRHNGPASSQHQHMLNTVGAETLEKLIEETVPSSIRLPQPM--QLPHGLSENAMLAELKQIAQQNTLNTSYIGQGYYNTHTPNVILRNVFENPGWYTAYTPYQPEISQGRLEALLNYQQMVMDLTGLDIANASLLDEATAAAEAMTLCKRGGKNKSSTFFVADDVHPQ 181
BLAST of DY271065 vs. ExPASy Swiss-Prot
Match: GCSP_VARPS (Glycine dehydrogenase [decarboxylating] OS=Variovorax paradoxus (strain S110) GN=gcvP PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.859e-45 Identity = 88/180 (48.89%), Postives = 122/180 (67.78%), Query Frame = 3 Query: 315 SVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFNIASNCHPQ 854 S++ L+ ++ F RH D+A+M ++G + LID VP +IR K + TE+ + ++ +A+ NKV++SFIG GYY TH P VILRN++ENPAWYT YTPYQAEI+QGR+E+LLNFQTM+ DLTG+ ++NAS+LDE TAAAEAM + K K F ++ +CHPQ Sbjct: 8 SLQQLENAEEFLARHIGIDAADEARMLPVIGSETRAELIDGIVPAAIR--RAKPMRLPAPATEADALAELKAIAAKNKVFRSFIGQGYYGTHTPGVILRNVLENPAWYTAYTPYQAEISQGRMEALLNFQTMVCDLTGMAIANASMLDEATAAAEAMTLAKRSVKSKSNVFLVSGDCHPQ 185
BLAST of DY271065 vs. ExPASy Swiss-Prot
Match: GCSP_THEEB (Glycine dehydrogenase [decarboxylating] OS=Thermosynechococcus elongatus (strain BP-1) GN=gcvP PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.859e-45 Identity = 95/178 (53.37%), Postives = 124/178 (69.66%), Query Frame = 3 Query: 327 LKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI--QKGKKKTFNIASNCHPQ 854 L+ F RH TP D KM L+G +L LI+A +P IR+ + EGL+E+ ++ ++ LA N+V++S+IGMGYYN P VI RNI+ENP WYTQYTPYQAEIAQGRLE+LLNFQT+++DLTGL ++NASLLDE TAAAEAM + N Q+G + F +A +CHPQ Sbjct: 13 LETDAEFVARHIGITPSDLPKMLSLLGYGSLKELINAVIPPEIRLQ--RPLALSEGLSETAALQKLRTLAQQNQVWRSYIGMGYYNCITPSVIQRNILENPGWYTQYTPYQAEIAQGRLEALLNFQTLVSDLTGLAIANASLLDEATAAAEAMTLSFNACRQRGANR-FLVAQDCHPQ 187
BLAST of DY271065 vs. ExPASy Swiss-Prot
Match: GCSP_RHOS1 (Glycine dehydrogenase [decarboxylating] OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=gcvP PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.859e-45 Identity = 92/169 (54.44%), Postives = 118/169 (69.82%), Query Frame = 3 Query: 351 RRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEG-LTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFNIASNCHPQ 854 RRH +P + +M +VG+ +LD LI+ TVP SIR ++ D L E +++ M+++A N+V S IG GYY T PP I RNI+ENPAWYT YTPYQ EIAQGRLE+LLN+QTM+ADLTGLP++NASLLDE TAAAEAM M K K + F + ++CHPQ Sbjct: 16 RRHIGPSPSEMEEMLRVVGVSSLDQLIEETVPASIRQET----PLDWAPLAEHELLARMREVAGKNRVMTSLIGQGYYGTVTPPAIQRNILENPAWYTAYTPYQPEIAQGRLEALLNYQTMVADLTGLPVANASLLDEATAAAEAMTMAERASKSKARAFFVDADCHPQ 180 The following BLAST results are available for this feature:
BLAST of DY271065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271065 ID=DY271065; Name=DY271065; organism=Citrus clementina; type=EST; length=1210bpback to top |