DY271083

Overview
NameDY271083
Unique NameDY271083
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1155
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_ACIBY (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AYE) GN=betB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 5.450e-23
Identity = 70/225 (31.11%), Postives = 115/225 (51.11%), Query Frame = 2
Query:  191 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAKTKDPRIFLVSFYG 853
            +++G++     G T +SINPAN + IAT+ +AS +D E  +K+  +  KIW  + A +R  ++R+  D LRE+   L RL +++ GK   E    ++    D+ ++  GL+  + G  +P  R +        PLGVV  I A+N+P  +  W +  AL  GN +++K               ++E++    LP  +F    G G EIGQ  T+ P I  +SF G
Sbjct:   10 YIHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVPL-RESSFFYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALK----LAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTG 229          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_ACIBT (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=betB PE=3 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 5.450e-23
Identity = 70/225 (31.11%), Postives = 115/225 (51.11%), Query Frame = 2
Query:  191 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAKTKDPRIFLVSFYG 853
            +++G++     G T +SINPAN + IAT+ +AS +D E  +K+  +  KIW  + A +R  ++R+  D LRE+   L RL +++ GK   E    ++    D+ ++  GL+  + G  +P  R +        PLGVV  I A+N+P  +  W +  AL  GN +++K               ++E++    LP  +F    G G EIGQ  T+ P I  +SF G
Sbjct:   10 YIHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVPL-RESSFFYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALK----LAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTG 229          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_ACIBS (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain SDF) GN=betB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 5.450e-23
Identity = 70/225 (31.11%), Postives = 115/225 (51.11%), Query Frame = 2
Query:  191 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAKTKDPRIFLVSFYG 853
            +++G++     G T +SINPAN + IAT+ +AS +D E  +K+  +  KIW  + A +R  ++R+  D LRE+   L RL +++ GK   E    ++    D+ ++  GL+  + G  +P  R +        PLGVV  I A+N+P  +  W +  AL  GN +++K               ++E++    LP  +F    G G EIGQ  T+ P I  +SF G
Sbjct:   10 YIHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVPL-RESSFFYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALK----LAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTG 229          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_ACIBC (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain ACICU) GN=betB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 5.450e-23
Identity = 70/225 (31.11%), Postives = 115/225 (51.11%), Query Frame = 2
Query:  191 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAKTKDPRIFLVSFYG 853
            +++G++     G T +SINPAN + IAT+ +AS +D E  +K+  +  KIW  + A +R  ++R+  D LRE+   L RL +++ GK   E    ++    D+ ++  GL+  + G  +P  R +        PLGVV  I A+N+P  +  W +  AL  GN +++K               ++E++    LP  +F    G G EIGQ  T+ P I  +SF G
Sbjct:   10 YIHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVPL-RESSFFYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALK----LAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTG 229          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_ACIB5 (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AB0057) GN=betB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 5.450e-23
Identity = 70/225 (31.11%), Postives = 115/225 (51.11%), Query Frame = 2
Query:  191 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAKTKDPRIFLVSFYG 853
            +++G++     G T +SINPAN + IAT+ +AS +D E  +K+  +  KIW  + A +R  ++R+  D LRE+   L RL +++ GK   E    ++    D+ ++  GL+  + G  +P  R +        PLGVV  I A+N+P  +  W +  AL  GN +++K               ++E++    LP  +F    G G EIGQ  T+ P I  +SF G
Sbjct:   10 YIHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVPL-RESSFFYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALK----LAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTG 229          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_ACIB3 (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AB307-0294) GN=betB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 5.450e-23
Identity = 70/225 (31.11%), Postives = 115/225 (51.11%), Query Frame = 2
Query:  191 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAKTKDPRIFLVSFYG 853
            +++G++     G T +SINPAN + IAT+ +AS +D E  +K+  +  KIW  + A +R  ++R+  D LRE+   L RL +++ GK   E    ++    D+ ++  GL+  + G  +P  R +        PLGVV  I A+N+P  +  W +  AL  GN +++K               ++E++    LP  +F    G G EIGQ  T+ P I  +SF G
Sbjct:   10 YIHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVPL-RESSFFYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALK----LAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTG 229          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: ALDH_BACST (Aldehyde dehydrogenase, thermostable OS=Bacillus stearothermophilus GN=aldHT PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 9.296e-23
Identity = 79/254 (31.10%), Postives = 111/254 (43.70%), Query Frame = 2
Query:  191 FVNGKW--KAHGPTVSSINPANNQKIATVVEAS-LEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAKTKDPRIFLVSFYGITRWGLRCQKQCPQKLVKFYLN*IGKQAI 940
            ++NG W          SINPAN   I   V+ S LED  E + A +EA   W +    +RGE + +    L + L  +   ++ EMGK L E   E    + +  +  G   +  G VIPS     ++  T  PLGVVGVI+ +NFP A+  W    ALV GN VV K               V E F     P  +    CG G+ +GQ     P I  V+F G    G +  +   ++  K+ L   GK  +
Sbjct:   13 YINGNWVSSVSNNVEPSINPANRHDIVGYVQRSTLEDVNEAVTAANEAQTSWWKRSGVERGEYLYKAAHILEQCLQDIAETMTREMGKTLAEAKAETMRGVHILRYYAGEGARKIGDVIPSSDSEGLLFTTRVPLGVVGVISPWNFPVAIPIWKMAPALVYGNTVVLK----PASETAVTAAKVIECFHEAGFPKGVVNMVCGSGSVVGQGIANHPDIDGVTFTGSNTVGKQVGRAAFERGAKYQLEMGGKNPV 262          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_ECOLC (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=betB PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.586e-22
Identity = 70/214 (32.71%), Postives = 105/214 (49.07%), Query Frame = 2
Query:  218 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAKTKDPRIFLVSFYG 853
            G T  +INPAN   +ATV  A  ED +  +K+  +  KIW  + A +R  ++R+  D LRE+   L +L +++ GK   E    ++    D+ ++  GL   L GS IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K               ++E++    LP  +F    G GAE GQ  T+ P I  VSF G
Sbjct:   21 GRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWASMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPL-RETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALK----LAEIYSEAGLPNGVFNVLPGVGAETGQYLTEHPGIAKVSFTG 229          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_ECOLU (Betaine aldehyde dehydrogenase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.071e-22
Identity = 70/214 (32.71%), Postives = 105/214 (49.07%), Query Frame = 2
Query:  218 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAKTKDPRIFLVSFYG 853
            G T  +INPAN   +ATV  A  ED +  +K+  +  KIW  + A +R  ++R+  D LRE+ + L +L +++ GK   E    ++    D+ ++  GL   L GS IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K               ++E++    LP  +F    G GAE GQ  T  P I  VSF G
Sbjct:   21 GRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNNELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPSLEGSQIPL-RETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALK----LAEIYSEAGLPDGVFNVLPGVGAETGQYLTDHPGIAKVSFTG 229          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_ECOLI (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=betB PE=1 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 2.071e-22
Identity = 70/214 (32.71%), Postives = 105/214 (49.07%), Query Frame = 2
Query:  218 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAKTKDPRIFLVSFYG 853
            G T  +INPAN   +ATV  A  ED +  +K+  +  KIW  + A +R  ++R+  D LRE+   L +L +++ GK   E    ++    D+ ++  GL   L GS IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K               ++E++    LP  +F    G GAE GQ  T+ P I  VSF G
Sbjct:   21 GRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWASMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPL-RETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALK----LAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTG 229          
The following BLAST results are available for this feature:
BLAST of DY271083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 377
Match NameE-valueIdentityDescription
BETB_ACIBY5.450e-2331.11Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBT5.450e-2331.11Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBS5.450e-2331.11Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBC5.450e-2331.11Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIB55.450e-2331.11Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIB35.450e-2331.11Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
ALDH_BACST9.296e-2331.10Aldehyde dehydrogenase, thermostable OS=Bacillus s... [more]
BETB_ECOLC1.586e-2232.71Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOLU2.071e-2232.71Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOLI2.071e-2232.71Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YM14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271083 ID=DY271083; Name=DY271083; organism=Citrus clementina; type=EST; length=1155bp
CTAATTCATTCCCACTCACTTTCATGTGACATTGTCTTACATAACTAATC
TTTTTTCAATCCTCAAAGTTCTTACAGTTTCTTTTACATTTCAAATCCAA
TATGGGATGTGACTTGCAGAGATGGAATTTGCAAAGCAAGAGTACGAGTT
TCTGAGTGAGATCGGCTTAAGTCCAGAAACTCCTGGATGTTTTGTGAATG
GCAAGTGGAAGGCACATGGTCCTACTGTCTCCTCTATCAATCCTGCTAAC
AATCAGAAAATTGCTACTGTTGTGGAGGCTTCACTTGAGGATTATGAGGA
AGGCATGAAAGCTTGCAGCGAAGCATCTAAGATATGGATGGAACTTCCAG
CTCCTAAGAGAGGGGAGGTTGTTAGACAAATAGGTGATGCATTGAGAGAA
AAACTGCATCATCTCGGCCGTCTTCTTTCAATTGAGATGGGAAAAATTCT
TCCAGAAGGAATTGGGGAAGTCCAAGAAGTTATTGACATGTGTGATTTTG
CTGTGGGTTTAAGCCGGCAACTTAATGGATCAGTAATACCTTCAGAACGT
CCCAATCATATGATGTTAGAGACATGGAATCCTCTTGGGGTAGTTGGTGT
CATTACAGCATTTAACTTCCCGTGTGCTGTTCTTGGATGGAATGCATGCA
TTGCACTAGTCTGCGGCAACTGTGTTGTTTGGAAAGGTGCTCCAACAACT
CCTTTGATCACCATAGCAATAACAAAGCTGGTGTCTGAGGTTTTCGAGAG
GAACAAGTTACCTGGTGCAATTTTTACCTCTTTTTGTGGGGGGGCTGAAA
TAGGTCAAGCAAAAACAAAAGATCCACGTATTTTTCTGGTTTCATTTTAT
GGGATAACAAGGTGGGGTTTAAGGTGCCAAAAACAATGCCCTCAAAAATT
GGTAAAGTTTTACTTGAATTAAATTGGAAAACAAGCAATTAATTTTTAAG
GGATAATGCCAAAATACAAAAAAACTGTTTCCTTTCTGTCCCATTTTCCG
GGGGGTCGGAAAAAGCGGGGCCAGCCCTGGCCCAACTTTTTTTTTAAAAA
GGGCCTTTTTCCCCAAAAACCAATTACACAAAAAACTGGGCCTTTTAATC
ACACCAATATTAGTGGGTTAACAAAAATAATTATTAAAAAAATAGAAAAA
ACTTT
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