DY271083

Overview
NameDY271083
Unique NameDY271083
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1155
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_YERP3 (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=betB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.256e-19
Identity = 64/225 (28.44%), Postives = 110/225 (48.89%), Query Frame = 2
Query:  191 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAKTKDPRIFLVSFYG 853
            ++NG +   A G T  ++NPAN + IA +  A+ +D ++ + A  +   +W  + A +R  ++R+  D LR++   L  + + + GK L E    ++    D+ ++  GL   L G  IP  R +  +     PLGVV  I A+N+P  +  W +  AL  GN +++K               ++E++    LP  +F    G G ++GQ  T+ P I  VSF G
Sbjct:   10 YINGAYTDSASGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQGQPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQIPL-RGSAFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTALK----LAEIYTEAGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTG 229          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: IOLA_BACP2 (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus pumilus (strain SAFR-032) GN=iolA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.143e-19
Identity = 63/223 (28.25%), Postives = 101/223 (45.29%), Query Frame = 2
Query:  191 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYG 853
            ++ G+W       T +  NPA  + IA V  ++ +D E  ++A  EA   W + P P+R  ++ +    L +K   L  L+++E GK + E  GEVQ  I+  +FA G    + G  +P             P+GV+G IT FNFP  V  W   +A+ CGN  V K               ++E+FE   LP  +     G  ++     +  ++  +SF G
Sbjct:   12 YIGGQWIEAETSQTEAVYNPATGKIIAEVPLSTKKDVERAVQAAQEAFTTWSKTPVPRRARILFKYQQLLVDKWDELAELVTMENGKSITEAKGEVQRGIECVEFAAGAPTLMMGKQLPDIASGLESGMYRYPIGVIGGITPFNFPMMVPCWMFPLAIACGNTFVLK----PSERTPILAARLAELFEEAGLPKGVLNIVNGAHDVVNGLLEHQKVKAISFVG 230          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: IOLA2_OCEIH (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Oceanobacillus iheyensis GN=iolA2 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.143e-19
Identity = 64/223 (28.70%), Postives = 98/223 (43.95%), Query Frame = 2
Query:  191 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYG 853
            ++ G+W       T    NPA  + IA V  ++ ED    ++  +EA K W E+P PKR  ++ +    L E    L +L+++E GK   E  GEVQ  I+  +FA G    + G  + S            P+GV+G IT FNFP  V  W   +A+  GN  V K               ++E+ E   LP  +F    G  ++        ++  +SF G
Sbjct:   12 YIGGEWIESRTEKTEDVFNPATGEVIAQVPISTTEDVHHAIEVANEAFKTWKEVPVPKRARILFKYQQLLVEHWEELAKLITLENGKNYAEAYGEVQRGIENVEFATGAPSLMMGEQLASIATELESGVYRYPIGVIGGITPFNFPMMVPCWMFPMAIATGNTFVMK----PSERTPLLANRLAELLEEAGLPNGVFNIVHGAHDVVNGLLDHKKVAAISFVG 230          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_MARMS (Betaine aldehyde dehydrogenase OS=Marinomonas sp. (strain MWYL1) GN=betB PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.143e-19
Identity = 67/250 (26.80%), Postives = 113/250 (45.20%), Query Frame = 2
Query:  191 FVNGKWKAH--GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYGITRWGLRCQKQCPQKLVKFYLN*IGK 931
            +++G++ A   G    +INPA  + IATV  A   + +  +++  +  K+W  +   +RG ++++  + LRE    L RL  ++ GK L E I  ++Q   D+ ++  GL+ ++ G        N        PLG+   I A+N+P  +  W +  AL  GN +++K               ++E+F    LP  +F    G A  GQ  T  P I  VSF G    G +      Q L +  +   GK
Sbjct:    7 YIHGRYHASTSGEHFETINPATGEVIATVEHAGQAELDAAVESAKQGQKVWSAMSPVERGRILKKAAELLRENNEELARLEVLDTGKPLQEAIVVDIQTGADVIEYYAGLTDKIQGDYQDLGNGNFFYTRR-EPLGICAGIGAWNYPIQIAMWKSGPALAAGNAMIFKPSEETPLTALK----LAEIFTEAGLPDGVFNVIQGDARTGQLITNHPDIDKVSFTGEVGTGKKVMAASAQSLKQVTMELGGK 251          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_STRM5 (Betaine aldehyde dehydrogenase OS=Stenotrophomonas maltophilia (strain R551-3) GN=betB PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.799e-19
Identity = 64/214 (29.91%), Postives = 104/214 (48.60%), Query Frame = 2
Query:  218 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAKTKDPRIFLVSFYG 853
            G T  ++NPA    IA V  AS  D E  +++ +E  K+W  + A +R  ++R+  + LRE+   L  L +++ GK L E    ++    D+ ++  GL+  + G  +P  R +        PLGVV  I A+N+P  +  W +  AL  GN +V+K               ++E++    +P  +F    G G EIGQ  T+ P I  +SF G
Sbjct:   21 GKTFRTVNPATGDVIAEVQVASQADVERAVQSAAEGQKVWAAMTAMERSRILRRAVEILRERNDELAHLETLDTGKALAETTTVDIVTGADVVEYYAGLATAIEGIQLPL-RESSFFYTRREPLGVVAGIGAWNYPIQIAMWKSAPALAAGNAMVFKPSEVTPLTAIR----LAEIYTEAGVPAGVFNVVQGPGREIGQWLTEHPVIEKISFTG 229          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: IOLA1_OCEIH (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Oceanobacillus iheyensis GN=iolA1 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 3.655e-19
Identity = 67/224 (29.91%), Postives = 98/224 (43.75%), Query Frame = 2
Query:  191 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWN-PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYG 853
            ++NGKW     G      NPA  + IATV  + +ED +  + A  E    W ++P P R   +      L++    L +++++E GK L +  GEVQ  I++ + A      + G  +PS     +    W  PLGVV  IT FNFP  V  W   +A+ CGN  V K             + + E+F     P  +     GG E+       P I  VSF G
Sbjct:   12 YINGKWVDAKSGKQEVIPNPATGETIATVTISDVEDVDMAVAAAKEVFPEWSDIPVPNRTRYLLDYWKLLQDNKEELAKIITLENGKSLRDAQGEVQRGIEVVELATSTPSMMMGDALPSIAKG-IDGSIWRYPLGVVAGITPFNFPMMVPLWMFPLAIACGNTFVLK----TSERTPILAERLVELFYEAGFPKGVLNLVHGGKEVVNRFLTHPDIEAVSFVG 230          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_YERPY (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=betB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 3.655e-19
Identity = 63/225 (28.00%), Postives = 109/225 (48.44%), Query Frame = 2
Query:  191 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAKTKDPRIFLVSFYG 853
            ++NG +     G T  ++NPAN + IA +  A+ +D ++ + A  +   +W  + A +R  ++R+  D LR++   L  + + + GK L E    ++    D+ ++  GL   L G  IP  R +  +     PLGVV  I A+N+P  +  W +  AL  GN +++K               ++E++    LP  +F    G G ++GQ  T+ P I  VSF G
Sbjct:   10 YINGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQGQPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQIPL-RGSAFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTALK----LAEIYTEAGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTG 229          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_ERWCT (Betaine aldehyde dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=betB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 3.655e-19
Identity = 66/225 (29.33%), Postives = 104/225 (46.22%), Query Frame = 2
Query:  191 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAKTKDPRIFLVSFYG 853
            ++NG +       T  ++NPAN   IA +  A+  D +  + A +   K+W  + A +R  ++R+  D LRE+   L  L + + GK L E    ++    D+ ++  GL   L G  IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K               ++E++    LP  +F    G G  +GQA T  P I  VSF G
Sbjct:   10 YINGAYVDSTGNDTFDAVNPANGDIIACIQSATAADVDRAVSAATAGQKVWAAMTAMERSRILRRAVDILRERNDELALLETHDTGKPLSETRTVDIVTGADVLEYYAGLIPMLEGQQIPL-RDTSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTALK----LAEIYTEAGLPAGVFNVLTGTGKSVGQALTTHPGIAKVSFTG 229          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_BACSU (Betaine aldehyde dehydrogenase OS=Bacillus subtilis GN=gbsA PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 4.774e-19
Identity = 71/252 (28.17%), Postives = 112/252 (44.44%), Query Frame = 2
Query:  191 FVNGKW-KAHGPTVSSI-NPANNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAKTKDPRIFLVSFYGITRWGLRCQKQCPQKLVKFYLN*IGK 931
            F++G+W  A    + SI NP N ++IATV E   ED  + + A   A     W  L   +RG++V +I + +R  L  L  L S++ GK L E   ++ ++ ++  +  GL+ +  G +I S  P+        P+GV G IT +N+P     W    AL  GN +V K             KL+ E      +P  +     G GA +G     +  + L+SF G    G +  +     + K  L   GK
Sbjct:    6 FIDGEWISAEKEQIRSIINPFNQEEIATVSEGGREDAIKAIAAARRAFDKGEWSSLSGLERGKIVLKIAELIRRDLEELAELESLDTGKTLEESKADMDDIANVFQYYAGLADKDGGEIISSPIPDSESKIIREPIGVCGQITPWNYPLLQASWKIAPALAAGNTIVMKPSEITPLTTIKVFKLMEEA----GVPKGVANLVLGPGATVGDELAVNKDVDLISFTGGIETGKKIMRAASGNVKKIALELGGK 253          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_PECCP (Betaine aldehyde dehydrogenase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=betB PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 6.235e-19
Identity = 68/225 (30.22%), Postives = 105/225 (46.67%), Query Frame = 2
Query:  191 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAKTKDPRIFLVSFYG 853
            ++NG +       T  ++NPAN + IA +  A++ D +  + A +   KIW  + A +R  ++R+  D LRE+   L  L + + GK L E    ++    D+ ++  GL   L G  IP  R          PLGVV  I A+N+P  +  W +  AL  GN +++K               ++EV+    LP  +F    G G  +GQA T  P I  VSF G
Sbjct:   10 YINGAYVDSTGDDTFDAVNPANGEIIAQLQSATVADVDRAVIAAAAGQKIWAAMTAMERSRILRRAVDILRERNDELALLETHDTGKPLSETRTVDIVTGADVLEYYAGLIPMLEGQQIPL-RDTSFAYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTALK----LAEVYTEAGLPAGVFNVLTGTGQSVGQALTTHPGIAKVSFTG 229          
The following BLAST results are available for this feature:
BLAST of DY271083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 377
Match NameE-valueIdentityDescription
BETB_YERP31.256e-1928.44Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
IOLA_BACP22.143e-1928.25Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA2_OCEIH2.143e-1928.70Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_MARMS2.143e-1926.80Betaine aldehyde dehydrogenase OS=Marinomonas sp. ... [more]
BETB_STRM52.799e-1929.91Betaine aldehyde dehydrogenase OS=Stenotrophomonas... [more]
IOLA1_OCEIH3.655e-1929.91Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_YERPY3.655e-1928.00Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_ERWCT3.655e-1929.33Betaine aldehyde dehydrogenase OS=Erwinia carotovo... [more]
BETB_BACSU4.774e-1928.17Betaine aldehyde dehydrogenase OS=Bacillus subtili... [more]
BETB_PECCP6.235e-1930.22Betaine aldehyde dehydrogenase OS=Pectobacterium c... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YM14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271083 ID=DY271083; Name=DY271083; organism=Citrus clementina; type=EST; length=1155bp
CTAATTCATTCCCACTCACTTTCATGTGACATTGTCTTACATAACTAATC
TTTTTTCAATCCTCAAAGTTCTTACAGTTTCTTTTACATTTCAAATCCAA
TATGGGATGTGACTTGCAGAGATGGAATTTGCAAAGCAAGAGTACGAGTT
TCTGAGTGAGATCGGCTTAAGTCCAGAAACTCCTGGATGTTTTGTGAATG
GCAAGTGGAAGGCACATGGTCCTACTGTCTCCTCTATCAATCCTGCTAAC
AATCAGAAAATTGCTACTGTTGTGGAGGCTTCACTTGAGGATTATGAGGA
AGGCATGAAAGCTTGCAGCGAAGCATCTAAGATATGGATGGAACTTCCAG
CTCCTAAGAGAGGGGAGGTTGTTAGACAAATAGGTGATGCATTGAGAGAA
AAACTGCATCATCTCGGCCGTCTTCTTTCAATTGAGATGGGAAAAATTCT
TCCAGAAGGAATTGGGGAAGTCCAAGAAGTTATTGACATGTGTGATTTTG
CTGTGGGTTTAAGCCGGCAACTTAATGGATCAGTAATACCTTCAGAACGT
CCCAATCATATGATGTTAGAGACATGGAATCCTCTTGGGGTAGTTGGTGT
CATTACAGCATTTAACTTCCCGTGTGCTGTTCTTGGATGGAATGCATGCA
TTGCACTAGTCTGCGGCAACTGTGTTGTTTGGAAAGGTGCTCCAACAACT
CCTTTGATCACCATAGCAATAACAAAGCTGGTGTCTGAGGTTTTCGAGAG
GAACAAGTTACCTGGTGCAATTTTTACCTCTTTTTGTGGGGGGGCTGAAA
TAGGTCAAGCAAAAACAAAAGATCCACGTATTTTTCTGGTTTCATTTTAT
GGGATAACAAGGTGGGGTTTAAGGTGCCAAAAACAATGCCCTCAAAAATT
GGTAAAGTTTTACTTGAATTAAATTGGAAAACAAGCAATTAATTTTTAAG
GGATAATGCCAAAATACAAAAAAACTGTTTCCTTTCTGTCCCATTTTCCG
GGGGGTCGGAAAAAGCGGGGCCAGCCCTGGCCCAACTTTTTTTTTAAAAA
GGGCCTTTTTCCCCAAAAACCAATTACACAAAAAACTGGGCCTTTTAATC
ACACCAATATTAGTGGGTTAACAAAAATAATTATTAAAAAAATAGAAAAA
ACTTT
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