DY271083

Overview
NameDY271083
Unique NameDY271083
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1155
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: IOLA2_BACLD (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=iolA2 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 4.042e-18
Identity = 63/223 (28.25%), Postives = 99/223 (44.39%), Query Frame = 2
Query:  191 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYG 853
            ++NG+W           +NPA  + +  V  ++ ED E   +  +EA K W ++  P+R  ++      L +    L  L++IE GK   E +GEV   I+  +FA G    + G  + +   +        P+GVVG I  FNFP  V  W   +A+  GN  + K             KLV E+FE+  LP  +F    G  ++     + P I  +SF G
Sbjct:   10 YINGEWVESKTDKYEDVVNPATKEVLCQVPISTREDIEYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLTQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLATIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILK---PSERTPLLTEKLV-ELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVG 228          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: SSDH_ARATH (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=ALDH5F1 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 5.278e-18
Identity = 66/227 (29.07%), Postives = 102/227 (44.93%), Query Frame = 2
Query:  194 VNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYGITRWG 868
            + GKW       T+   NPA  + IA V     ++  + + +  EA   W  L A +R +V+R+  D L      LG+L+++E GK L E IGEV       ++    ++++ G +IP    +  +L    P+GVVG IT +NFP A++      AL  G  VV K             +L     +    PGA+        EIG A    P++  ++F G T  G
Sbjct:   57 IGGKWLDSYDNKTIKVNNPATGEIIADVACMGTKETNDAIASSYEAFTSWSRLTAGERSKVLRRWYDLLIAHKEELGQLITLEQGKPLKEAIGEVAYGASFIEYYAEEAKRVYGDIIPPNLSDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALASGCTVVVKPSELTPLTALAAAEL---ALQAGVPPGALNVVMGNAPEIGDALLTSPQVRKITFTGSTAVG 280          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: IOLA1_GEOKA (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Geobacillus kaustophilus GN=iolA1 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 5.278e-18
Identity = 68/226 (30.09%), Postives = 99/226 (43.81%), Query Frame = 2
Query:  191 FVNGKWKAHG--PTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG---SVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYG 853
            ++ G+W A     T+   NPA  + +A V  ++ ED ++ ++A  +A   W ++P PKR  ++      L +    L  L+  E GK   E  GE+Q  I+  +FA G    L G   S I  E  + M      PLGVV  IT FNFP  V  W   +A+VCGN  V K               ++E+F     P  +     G  E+  A      I  +SF G
Sbjct:   14 YIGGQWVASSGTETLEVPNPATGEVLARVPISTKEDVDQAVQAAKKAFATWKDVPVPKRARIMFSFHHLLNQHHEELAELVVQENGKAYKEAYGEIQRGIECVEFAAGAPTLLMGESLSNIAEEIDSEMFR---YPLGVVAGITPFNFPMMVPLWMFPLAIVCGNTFVLK----PSERTPILANKLAELFTEAGAPPGVLNVVHGAHEVVNALIDHEDIRAISFVG 232          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_XANC5 (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=betB PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 5.278e-18
Identity = 64/232 (27.59%), Postives = 104/232 (44.83%), Query Frame = 2
Query:  218 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAKTKDPRIFLVSFYGITRWGLRCQKQCPQKLVK 907
            G T   +NPA  + +A V  A  +D +  + +     + W  L   +R  ++ +    LRE+   L  L ++  GK L E    +V    D+ ++  G+++ L G+ +P  R          PLGVVG I A+N+P  +  W A  AL  GN +++K               ++E+F    LP  +F    G GA +G A T+ P+I  +SF G T  G +         +K
Sbjct:   21 GHTFEVVNPATGEVLANVHNAGADDLDAAVDSAQAGQRQWAALTTVERSRILLRAVALLRERNDALAELETLNTGKPLSETRSVDVVTGADVLEYYAGVAQALQGAQVPL-REGSFFYTRHEPLGVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLTALK----LAEIFTEAGLPDGVFNVLPGDGASVGTALTEHPQIEKISFTGGTATGRKVMASASSSSLK 247          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: IOLA1_BACSK (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus clausii (strain KSM-K16) GN=iolA1 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 6.894e-18
Identity = 65/239 (27.20%), Postives = 102/239 (42.68%), Query Frame = 2
Query:  191 FVNGKWKAHGPTVSS--INPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYGITRWGLRCQKQCPQKL 901
            ++NGKW     ++    +NPA  + I  V  ++  D E  ++A   A   W ++  P+R  ++      L+     L RL++IE GK L E  GEVQ  I+  +FA G    + G  +P    +        P+GVVG I  FNFP  V  W   +A+  GN  + K              L++E      +P  +F    G  ++     + P I  +SF G    G    K+  + L
Sbjct:   14 YINGKWIESSTSLYEDVVNPATKEVICQVPLSTKADVEYAVEAAKTAFAKWSKVAVPRRARILFNYQQLLQRDKEELARLITIENGKNLTEARGEVQRGIENVEFAAGAPSLMMGDSLPMIATDVEASNYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNAFLLKPSERTPLLTEKLADLLTEA----GVPDGVFNVVYGAHDVVNGMLEHPDIKAISFVGSKPVGEYVYKKASENL 248          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_BURPP (Betaine aldehyde dehydrogenase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=betB PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 6.894e-18
Identity = 56/213 (26.29%), Postives = 100/213 (46.95%), Query Frame = 2
Query:  218 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYG 853
            G T  +++PA  + +A+V +AS  D +  +++  +  + W  L A +R  ++R+  D LRE+   L  L + + GK + E +  ++    D+ ++  GL+  + G  IP  RP   +     PLGV   I A+N+P  +  W +  AL  GN +++K               ++E+F    +P  +F    G   +G      P I  +SF G
Sbjct:   21 GETFDTLDPATGETLASVQQASAADVDRAVRSAKQGQREWAALTAMQRSRILRRAVDLLRERNDELAALETRDTGKPIAETLAVDIVTGADVIEYYAGLATAIEGQQIPL-RPTSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEITPLSALK----LAEIFTEAGVPAGVFNVVQGDGRVGAMLAAHPDIEKISFTG 228          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: IOLA_BACCQ (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus cereus (strain Q1) GN=iolA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 9.004e-18
Identity = 63/223 (28.25%), Postives = 106/223 (47.53%), Query Frame = 2
Query:  194 VNGKW-KAHGPTVSSI-NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWN-PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYG 853
            +NG+W ++ G  V ++ NPA  + IA V  +  ED E+ ++A   A + W ++P P R   + +    L+E    L +++++E GK L +  GEVQ  I+  + A      + G  +P+   + +    W  P+GVV  IT FNFP  +  W   +A+ CGN  V K             + + E+F     P  +     GG ++  +  ++  I  VSF G
Sbjct:   13 INGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVEKAVEAAKAAYETWSKVPVPNRSRQLYKYLQLLQENKEELAKIITLENGKTLTDATGEVQRGIEAVELATSTPNLMMGQALPN-IASGIDGSIWRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK----TSERTPLLAERLVELFYEAGFPKGVLNLVQGGKDVVNSILENKDIQAVSFVG 230          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: IOLA_BACC7 (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus cereus (strain AH187) GN=iolA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 9.004e-18
Identity = 63/223 (28.25%), Postives = 106/223 (47.53%), Query Frame = 2
Query:  194 VNGKW-KAHGPTVSSI-NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWN-PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYG 853
            +NG+W ++ G  V ++ NPA  + IA V  +  ED E+ ++A   A + W ++P P R   + +    L+E    L +++++E GK L +  GEVQ  I+  + A      + G  +P+   + +    W  P+GVV  IT FNFP  +  W   +A+ CGN  V K             + + E+F     P  +     GG ++  +  ++  I  VSF G
Sbjct:   13 INGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVEKAVEAAKAAYETWSKVPVPNRSRQLYKYLQLLQENKEELAKIITLENGKTLTDATGEVQRGIEAVELATSTPNLMMGQALPN-IASGIDGSIWRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK----TSERTPLLAERLVELFYEAGFPKGVLNLVQGGKDVVNSILENKDIQAVSFVG 230          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: IOLA_BACC1 (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus cereus (strain ATCC 10987) GN=iolA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 9.004e-18
Identity = 63/223 (28.25%), Postives = 106/223 (47.53%), Query Frame = 2
Query:  194 VNGKW-KAHGPTVSSI-NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWN-PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYG 853
            +NG+W ++ G  V ++ NPA  + IA V  +  ED E+ ++A   A + W ++P P R   + +    L+E    L +++++E GK L +  GEVQ  I+  + A      + G  +P+   + +    W  P+GVV  IT FNFP  +  W   +A+ CGN  V K             + + E+F     P  +     GG ++  +  ++  I  VSF G
Sbjct:   13 INGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVEKAVEAAKAAYETWSKVPVPNRSRQLYKYLQLLQENKEELAKIITLENGKTLTDATGEVQRGIEAVELATSTPNLMMGQALPN-IASGIDGSIWRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK----TSERTPLLAERLVELFYEAGFPKGVLNLVQGGKDVVNSILENKDIQAVSFVG 230          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: IOLA1_BACHK (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus thuringiensis subsp. konkukian GN=iolA1 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 9.004e-18
Identity = 63/223 (28.25%), Postives = 106/223 (47.53%), Query Frame = 2
Query:  194 VNGKW-KAHGPTVSSI-NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWN-PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYG 853
            +NG+W ++ G  V ++ NPA  + IA V  +  ED E+ ++A   A + W ++P P R   + +    L+E    L +++++E GK L +  GEVQ  I+  + A      + G  +P+   + +    W  P+GVV  IT FNFP  +  W   +A+ CGN  V K             + + E+F     P  +     GG ++  +  ++  I  VSF G
Sbjct:   13 INGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVEKAVEAAKAAYETWSKVPVPNRSRQLYKYLQLLQENKEELAKIITLENGKTLTDATGEVQRGIEAVELATSAPNLMMGQALPN-IASGIDGSIWRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK----TSERTPLLAERLVELFYEAGFPKGVLNLVQGGKDVVNSILENKDIQAVSFVG 230          
The following BLAST results are available for this feature:
BLAST of DY271083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 377
Match NameE-valueIdentityDescription
IOLA2_BACLD4.042e-1828.25Methylmalonate semialdehyde dehydrogenase [acylati... [more]
SSDH_ARATH5.278e-1829.07Succinate-semialdehyde dehydrogenase, mitochondria... [more]
IOLA1_GEOKA5.278e-1830.09Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_XANC55.278e-1827.59Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
IOLA1_BACSK6.894e-1827.20Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_BURPP6.894e-1826.29Betaine aldehyde dehydrogenase OS=Burkholderia phy... [more]
IOLA_BACCQ9.004e-1828.25Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA_BACC79.004e-1828.25Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA_BACC19.004e-1828.25Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA1_BACHK9.004e-1828.25Methylmalonate semialdehyde dehydrogenase [acylati... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YM14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271083 ID=DY271083; Name=DY271083; organism=Citrus clementina; type=EST; length=1155bp
CTAATTCATTCCCACTCACTTTCATGTGACATTGTCTTACATAACTAATC
TTTTTTCAATCCTCAAAGTTCTTACAGTTTCTTTTACATTTCAAATCCAA
TATGGGATGTGACTTGCAGAGATGGAATTTGCAAAGCAAGAGTACGAGTT
TCTGAGTGAGATCGGCTTAAGTCCAGAAACTCCTGGATGTTTTGTGAATG
GCAAGTGGAAGGCACATGGTCCTACTGTCTCCTCTATCAATCCTGCTAAC
AATCAGAAAATTGCTACTGTTGTGGAGGCTTCACTTGAGGATTATGAGGA
AGGCATGAAAGCTTGCAGCGAAGCATCTAAGATATGGATGGAACTTCCAG
CTCCTAAGAGAGGGGAGGTTGTTAGACAAATAGGTGATGCATTGAGAGAA
AAACTGCATCATCTCGGCCGTCTTCTTTCAATTGAGATGGGAAAAATTCT
TCCAGAAGGAATTGGGGAAGTCCAAGAAGTTATTGACATGTGTGATTTTG
CTGTGGGTTTAAGCCGGCAACTTAATGGATCAGTAATACCTTCAGAACGT
CCCAATCATATGATGTTAGAGACATGGAATCCTCTTGGGGTAGTTGGTGT
CATTACAGCATTTAACTTCCCGTGTGCTGTTCTTGGATGGAATGCATGCA
TTGCACTAGTCTGCGGCAACTGTGTTGTTTGGAAAGGTGCTCCAACAACT
CCTTTGATCACCATAGCAATAACAAAGCTGGTGTCTGAGGTTTTCGAGAG
GAACAAGTTACCTGGTGCAATTTTTACCTCTTTTTGTGGGGGGGCTGAAA
TAGGTCAAGCAAAAACAAAAGATCCACGTATTTTTCTGGTTTCATTTTAT
GGGATAACAAGGTGGGGTTTAAGGTGCCAAAAACAATGCCCTCAAAAATT
GGTAAAGTTTTACTTGAATTAAATTGGAAAACAAGCAATTAATTTTTAAG
GGATAATGCCAAAATACAAAAAAACTGTTTCCTTTCTGTCCCATTTTCCG
GGGGGTCGGAAAAAGCGGGGCCAGCCCTGGCCCAACTTTTTTTTTAAAAA
GGGCCTTTTTCCCCAAAAACCAATTACACAAAAAACTGGGCCTTTTAATC
ACACCAATATTAGTGGGTTAACAAAAATAATTATTAAAAAAATAGAAAAA
ACTTT
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