DY271086

Overview
NameDY271086
Unique NameDY271086
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1184
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271086 vs. ExPASy Swiss-Prot
Match: KPYK_STAS1 (Pyruvate kinase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=pyk PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 5.293e-21
Identity = 71/236 (30.08%), Postives = 123/236 (52.12%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV-KGN-DVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKNKEVISSWGIPKQIDFLSLSYTRHAENVGQAREYLSNLGGLSQTQIFAKIENKKGL 883
            TKIV T+GP S S +++   +KAGM+VAR +FS G+   H+  ++ ++   K   K  A++LDT GPE++  N  +  I L+  GS V       E T +   + ++ L   V++G  I +   L        + L+V  + K N +V C + NT  L      ++   +++ LP ++DK+ + I ++GI + +DF++ S+ R   +V   R+ L          I  KIEN++G+
Sbjct:    4 TKIVCTIGPASESEEMLEKLIKAGMNVARLNFSHGDQAEHKARIDTIRKVSKRLGKTVAILLDTKGPEIRTHNMKDGLIELE-KGSEVTVSMTEVEGTPEKFSVTYENLINDVEEGSYILLDDGL--------IELQVKSIDKANGEVLCDVLNTGELKNKK-GVNLPGVKVSLPGITDKDADDI-NFGISEGVDFIAASFVRRPSDVLDIRKLLEAKQN-KNISIIPKIENQEGI 227          
BLAST of DY271086 vs. ExPASy Swiss-Prot
Match: KPYK_STAHJ (Pyruvate kinase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=pyk PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 9.029e-21
Identity = 72/237 (30.38%), Postives = 124/237 (52.32%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV---KGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKNKEVISSWGIPKQIDFLSLSYTRHAENVGQAREYLSNLGGLSQTQIFAKIENKKGL 883
            TKIV T+GP S S +++   +KAGM+VAR +FS G+ E H+  ++ ++       K   ++LDT GPE++  +  +  I L+  G  V+      E T +   + ++ L   V+ G  I +   L        V L+V ++   KG +V C I NT  L      ++   +++ LP ++DK+ + I  +GI + +D+++ S+ R   +V   RE L      + T IF KIEN++G+
Sbjct:    4 TKIVCTIGPASESEEMLEKLMKAGMNVARLNFSHGSHEEHKARIDTIRKVADRLGKTIGILLDTKGPEIRTHDMKDGLIMLE-KGKEVIVSMSQVEGTPEKFSVTYEDLINDVQVGSYILLDDGL--------VELQVKDIDKTKG-EVKCDILNTGELKNKK-GVNLPGVKVNLPGITDKDADDI-LFGIKEDVDYIAASFVRRPSDVLDIREILERENNHNIT-IFPKIENQEGI 227          
BLAST of DY271086 vs. ExPASy Swiss-Prot
Match: KPYK_NEUCR (Pyruvate kinase OS=Neurospora crassa GN=pyk-1 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 9.029e-21
Identity = 71/241 (29.46%), Postives = 123/241 (51.04%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT-TKKLCAVMLDTVGPELQVVN-KSEKAISLKADGSVVLTPD--CGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKNKEVISSWGIPKQIDFLSLSYTRHAENVGQAREYLSNLGGLSQTQIFAKIENKKGLTPF 892
            T I+ T+GPK+ SV+ I+    AG++V R +FS G+ EYHQ  ++N + A K    +  A+ LDT GPE++  N K+++ I + A   + +T D     E T + + +++  + K +  G  I++   +           EV E+  +    V         S   ++     ++LP LS+K+K  +  +G+  ++D +  S+ R  +++   RE L   G   Q QI AKIEN++GL  F
Sbjct:   34 TSIICTIGPKTNSVEAINKLRDAGLNVVRMNFSHGSYEYHQSVIDNARQAEKVHPGRPIAIALDTKGPEIRTGNTKNDEDIPISAGTILNITTDEKYKDECTIEHMYVDYVNITKVIAPGRIIYVDDGVLA--------FEVLEIVDDKTIKVKARNNGYISSRKGVNLPNTDVDLPALSEKDKADL-RFGVKNKVDMVFASFIRRGQDIKDIREVLGEDG--KQIQIIAKIENRQGLNNF 263          
BLAST of DY271086 vs. ExPASy Swiss-Prot
Match: KPYM_MOUSE (Pyruvate kinase isozymes M1/M2 OS=Mus musculus GN=Pkm2 PE=1 SV=4)

HSP 1 Score: 101.293 bits (251), Expect = 1.179e-20
Identity = 70/248 (28.23%), Postives = 132/248 (53.23%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT------TKKLCAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLTPDCG--QEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKNKEVISSWGIPKQIDFLSLSYTRHAENVGQAREYLSNLGGLSQTQIFAKIENKKGLTPF 892
            T I+ T+GP SRSV+++   +K+GM+VAR +FS G  EYH ET++N++ A ++        +  AV LDT GPE++   +       + LK   ++ +T D    ++    +L +++  + K V+ G  I++   L +        L+V E   + +   ++N  +L GS   ++     ++LP +S+K+ + +  +G+ + +D +  S+ R A +V + R+ L   G     +I +KIEN +G+  F
Sbjct:   45 TGIICTIGPASRSVEMLKEMIKSGMNVARLNFSHGTHEYHAETIKNVREATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLIS--------LQVKEKGADFLVTEVENGGSL-GSKKGVNLPGAAVDLPAVSEKDIQDL-KFGVEQDVDMVFASFIRKAADVHEVRKVLGEKG--KNIKIISKIENHEGVRRF 280          
BLAST of DY271086 vs. ExPASy Swiss-Prot
Match: KPYM_HUMAN (Pyruvate kinase isozymes M1/M2 OS=Homo sapiens GN=PKM2 PE=1 SV=4)

HSP 1 Score: 100.523 bits (249), Expect = 2.011e-20
Identity = 69/248 (27.82%), Postives = 131/248 (52.82%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT------TKKLCAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLTPDCG--QEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKNKEVISSWGIPKQIDFLSLSYTRHAENVGQAREYLSNLGGLSQTQIFAKIENKKGLTPF 892
            T I+ T+GP SRSV+ +   +K+GM+VAR +FS G  EYH ET++N++ A ++        +  AV LDT GPE++   +       + LK   ++ +T D    ++    +L +++  + K V+ G  I++   L +        L+V +   + +   ++N  +L GS   ++     ++LP +S+K+ + +  +G+ + +D +  S+ R A +V + R+ L   G     +I +KIEN +G+  F
Sbjct:   45 TGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLIS--------LQVKQKGADFLVTEVENGGSL-GSKKGVNLPGAAVDLPAVSEKDIQDL-KFGVEQDVDMVFASFIRKASDVHEVRKVLGEKG--KNIKIISKIENHEGVRRF 280          
BLAST of DY271086 vs. ExPASy Swiss-Prot
Match: KPYK_ASPNG (Pyruvate kinase OS=Aspergillus niger GN=pkiA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.011e-20
Identity = 79/269 (29.37%), Postives = 141/269 (52.42%), Query Frame = 2
Query:  101 SSHLLLEEPIRMASILEPSKASFFPAMTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT-TKKLCAVMLDTVGPELQVVN-KSEKAISLKADGSVVLTPDCGQEATS---QVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKNKEVISSWGIPKQIDFLSLSYTRHAENVGQAREYLSNLGGLSQTQIFAKIENKKGLTPF 892
            S+ + LE   ++ + + PSK       T I+GT+GPK+ SV+ I+    AG++V R +FS G+ +YHQ  ++N + A KT   +  A+ LDT GPE++  N   +K I +K    + +T D  Q AT+   + + +++  + K +  G  I++   + +        LEV + K   V C+  N   ++ S   ++     ++LP LS+K+   +  +G+  ++D +  S+ R   ++   RE L   G   + QI AKIEN++G+  F
Sbjct:   11 SNRMKLEWHSKLNTEMVPSKNF---RRTSIIGTIGPKTNSVEKINSLRTAGLNVVRMNFSHGSYQYHQSVIDNAREAAKTQVGRPLAIALDTKGPEIRTGNTPDDKDIPIKQGHELNITTD-EQYATASDDKNMYLDYKNITKVISPGKLIYVDDGILSFEV-----LEVVDDKTIRVRCL--NNGNIS-SRKGVNLPGTDVDLPALSEKDIADL-KFGVRNKVDMVFASFIRRGSDIRHIREVLGEEG--KEIQIIAKIENQQGVNNF 264          
BLAST of DY271086 vs. ExPASy Swiss-Prot
Match: KPYK1_TRYBB (Pyruvate kinase 1 OS=Trypanosoma brucei brucei GN=PYK1 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.011e-20
Identity = 70/235 (29.79%), Postives = 120/235 (51.06%), Query Frame = 2
Query:  185 KIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQE--ATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKNKEVISSWGIPKQIDFLSLSYTRHAENVGQAREYLSNLGGLSQTQIFAKIENKKGL 883
            +IV T+GP ++SV+ +   +K+GMSVAR +FS G+ EYHQ T+ N++AA         + LDT GPE++     +  +S      V +T D   E   T +   I++  L  +V+ G +I++      G  T  V   VS+     + C + N   L      ++     ++LP +S+K+++ +  +G+ + +D +  S+ R AE V + R  L   G      I +KIEN +G+
Sbjct:   23 RIVCTIGPSTQSVEALKNLMKSGMSVARMNFSHGSHEYHQTTINNVRAAAAELGLHIGIALDTKGPEIRTGLFKDGEVSFAPGDIVCVTTDPAYEKVGTKEKFYIDYPQLTNAVRPGGSIYVDD----GVMTLRV---VSKEDDRTLKCHVNNHHRLTDRR-GINLPGCEVDLPAVSEKDRKDL-EFGVAQGVDMIFASFIRTAEQVREVRAALGEKG--KDILIISKIENHQGV 246          
BLAST of DY271086 vs. ExPASy Swiss-Prot
Match: KPYM_PONAB (Pyruvate kinase isozyme M1 OS=Pongo abelii GN=PKM2 PE=2 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 2.627e-20
Identity = 69/248 (27.82%), Postives = 131/248 (52.82%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT------TKKLCAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLTPDCG--QEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKNKEVISSWGIPKQIDFLSLSYTRHAENVGQAREYLSNLGGLSQTQIFAKIENKKGLTPF 892
            T I+ T+GP SRSV+ +   +K+GM+VAR +FS G  EYH ET++N++ A ++        +  AV LDT GPE++   +       + LK   ++ +T D    ++    +L +++  + K V+ G  I++   L +        L+V +   + +   ++N  +L GS   ++     ++LP +S+K+ + +  +G+ + +D +  S+ R A +V + R+ L   G     +I +KIEN +G+  F
Sbjct:   45 TGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLIS--------LQVKQKGADFLLTEVENGGSL-GSKKGVNLPGAAVDLPAVSEKDIQDL-KFGVEQDVDMVFASFIRKASDVHEVRKVLGEKG--KNIKIISKIENHEGVRRF 280          
BLAST of DY271086 vs. ExPASy Swiss-Prot
Match: KPYK_XENLA (Pyruvate kinase muscle isozyme OS=Xenopus laevis GN=pkm PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.627e-20
Identity = 73/248 (29.44%), Postives = 127/248 (51.21%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTK------KLCAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLTPDCG--QEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKNKEVISSWGIPKQIDFLSLSYTRHAENVGQAREYLSNLGGLSQTQIFAKIENKKGLTPF 892
            T I+ T+GP SRSV+++   +K+GM++AR +FS G  EYH  T++N++ A ++        +  AV LDT GPE++   +       + LK   ++ +T D    +     VL +++  L K VK G  I++   L +        L V E+  +     I+N   L GS   ++     ++LP +S K+ + +  +G+ + +D +  S+ R A +V + RE L   G     +I +KIEN +G+  F
Sbjct:   41 TGIICTIGPASRSVEMLKEMIKSGMNIARLNFSHGTHEYHAGTIKNVREATESLASNPIHYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATMRITLDDAFQENCDENVLWVDYKNLTKVVKPGSKIYVDDGLIS--------LLVKEIGPDFCVTEIENGGML-GSKKGVNLPGAAVDLPAVSSKDIQDL-QFGVEQDVDMVFASFIRKAADVHEVREVLGEKG--KNIKIISKIENHEGVRRF 276          
BLAST of DY271086 vs. ExPASy Swiss-Prot
Match: KPYK_CLOPE (Pyruvate kinase OS=Clostridium perfringens GN=pykF PE=3 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 2.627e-20
Identity = 66/236 (27.97%), Postives = 122/236 (51.69%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQE--ATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKNKEVISSWGIPKQIDFLSLSYTRHAENVGQAREYLSNLGGLSQTQIFAKIENKKGL 883
            TK++ T+GP S S +++   ++ GM+ AR +FS G+   H+E +E +K   K  K   A++LD  GP+++  N       LK       T  CG E    +    I++  L + +K G +I +   L           +V EV+G D+ C +    T+      ++   + I+LP +++K++  +  +G   ++DF++ S+ R  E+V + RE L + GG    +I +KIE+++G+
Sbjct:    4 TKMIFTIGPSSDSEEILREFIRIGMNAARLNFSHGDHASHKEKIELIKRLRKEEKSATAILLDIKGPKIRTYNFKNGEAELKNGDE--FTFSCGDEILGDNTKCSISYKELYEDIKPGGSILVDDGLLE--------FKVKEVRGTDIICEVIEGGTIKDHK-GVNVPNVPIKLPAVTEKDRSDL-IFGCEMEVDFVAASFIRKPEDVLEVREILDSHGG-KDIKIISKIESQEGV 226          
The following BLAST results are available for this feature:
BLAST of DY271086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
KPYK_STAS15.293e-2130.08Pyruvate kinase OS=Staphylococcus saprophyticus su... [more]
KPYK_STAHJ9.029e-2130.38Pyruvate kinase OS=Staphylococcus haemolyticus (st... [more]
KPYK_NEUCR9.029e-2129.46Pyruvate kinase OS=Neurospora crassa GN=pyk-1 PE=3... [more]
KPYM_MOUSE1.179e-2028.23Pyruvate kinase isozymes M1/M2 OS=Mus musculus GN=... [more]
KPYM_HUMAN2.011e-2027.82Pyruvate kinase isozymes M1/M2 OS=Homo sapiens GN=... [more]
KPYK_ASPNG2.011e-2029.37Pyruvate kinase OS=Aspergillus niger GN=pkiA PE=3 ... [more]
KPYK1_TRYBB2.011e-2029.79Pyruvate kinase 1 OS=Trypanosoma brucei brucei GN=... [more]
KPYM_PONAB2.627e-2027.82Pyruvate kinase isozyme M1 OS=Pongo abelii GN=PKM2... [more]
KPYK_XENLA2.627e-2029.44Pyruvate kinase muscle isozyme OS=Xenopus laevis G... [more]
KPYK_CLOPE2.627e-2027.97Pyruvate kinase OS=Clostridium perfringens GN=pykF... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YM17FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271086 ID=DY271086; Name=DY271086; organism=Citrus clementina; type=EST; length=1184bp
TAAAATTCAAAACATTCTAATCAACGCTAACCGCTGCCTCTTTCATCTCT
CGTACTCTCTCTGTATCTCTCTGTATCTCTCTGTTCAGTGAAAGATGCAT
TCAAGTCACTTGCTTCTCGAGGAGCCAATCAGGATGGCTTCAATCCTGGA
GCCATCCAAAGCCAGTTTCTTCCCGGCAATGACCAAAATTGTCGGAACGC
TTGGTCCTAAATCTCGATCTGTTGATGTTATATCCGGTTGCCTCAAAGCT
GGAATGTCTGTGGCTAGATTCGATTTCTCGTGGGGTAATACTGAATACCA
CCAAGAGACCTTGGAGAATCTCAAGGCGGCAGTTAAGACTACTAAGAAGC
TTTGTGCTGTTATGTTGGACACAGTGGGTCCCGAATTGCAGGTTGTTAAT
AAGAGTGAGAAGGCAATTTCACTTAAGGCAGATGGTTCTGTTGTTCTCAC
ACCTGACTGTGGACAAGAAGCCACTTCTCAAGTTTTGCCCATCAATTTCG
ATGGACTTGCTAAGTCAGTGAAGAAAGGAGACACCATTTTTATCGGTCAA
TACTTGTTCACTGGAAGTGAGACTACTTCTGTGTGGCTGGAGGTTTCTGA
AGTGAAAGGAAATGATGTAACTTGTGTGATAAAGAATACTGCAACGTTGG
CTGGTTCACTTTTCACTTTACATGCCTCTCAAATTCGTATTGAACTGCCA
ACTCTTTCTGATAAAAATAAGGAAGTCATTAGTTCTTGGGGAATTCCAAA
ACAAATTGACTTCCTCTCATTGTCCTATACCCGACATGCAGAAAACGTGG
GCCAAGCTCGCGAATATCTCTCCAATTTGGGTGGACTCAGTCAAACTCAA
ATTTTTGCAAAAATTGAAAATAAAAAGGGGTTGACCCCTTTTTGAAAAAA
ACCTTTCAACCAACAAAAGGTAATTAATTCTTTCCCCTGGGAAATTTGGG
AAACCAATCTTCCTCCCGGAAAAAGGGGTTCCTGTTTTCAAAAAACTGCC
CTTTTAAAAAATGTTAAAATTGGGGGGGAAAAAAACCCCACAGGGGTTTA
CCCCGGTTTTGGGGAAAAAAAATAAAAGGAAAAAACCCGAGAAACCCAAA
CTTCGGGGTCTGAAAAAACAACTGTTATTTTTCTCCCAAAATGGTTGCTG
GTCTTTTAAAAAATGAAAAAAAGGGATATTGACA
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