DY271106

Overview
NameDY271106
Unique NameDY271106
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1139
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271106 vs. ExPASy Swiss-Prot
Match: WHT3_CAEEL (ABC transporter ATP-binding protein/permease wht-3 OS=Caenorhabditis elegans GN=wht-3 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 6.118e-19
Identity = 69/255 (27.06%), Postives = 135/255 (52.94%), Query Frame = 1
Query:    4 NSETRKMFIEEVMELVELKPLRQSLVGLPG-VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGHHSCHLISYFEAIPGVEKIKDGYNPATW------MLEVSASSQEVALGVDFCDIYKRSELCRRN--KLLIEDLSKPAPGSKDLHFATQYSQSAFSQFMACLWKQHWSYWRNPAYTAVRFLFTTFIALLLGSIFW 741
            N  TR+  ++E++E++ L+  R   +G PG V G+S  + +RLT A EL++NPS++F DEPTSGLD+  AA V++ ++N  ++GRT+   IHQP+ ++F  FD++  +   G+  ++G   H S   + +F        I   +NP  W      ++  + +     +G    + Y++S + +++  ++ +   ++  P  ++  F        F++  A L +      R+PA   ++ +    + L +GS++W
Sbjct:  146 NKHTRRERVDEIIEMLRLQNCRDLKIGTPGLVKGISGGEARRLTFACELLSNPSLLFADEPTSGLDSFMAASVVQILKNLANSGRTL---IHQPTAELFFQFDKIIFLSM-GKTAFMG-TPHES---VKFFADCG--HPIPKLFNPPEWIQSKLSVIPNNETKSRETIG-KIIEFYEKSIIHQKSIVEIRVIATTELPPYIENPGF--------FAETGALLKRACLDVIRSPAQMRMKLIQKVVMGLFIGSLYW 381          
BLAST of DY271106 vs. ExPASy Swiss-Prot
Match: YO075_YEAST (Uncharacterized ABC transporter ATP-binding protein/permease YOL075C OS=Saccharomyces cerevisiae GN=YOL075C/YOL074C PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 7.990e-19
Identity = 53/155 (34.19%), Postives = 96/155 (61.94%), Query Frame = 1
Query:    4 NSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGHHSCHLISYFEAIPGVEKIKDGYNPATWMLEVSA 465
            +  T+K+ +E+++E + LK    +LVG     GLS  +++RL+I  ++++NPSI+F+DEPT+GLDA +A +V++T++    + GRT + +IHQP  DI    D++ ++ + G  VY   +     + I YFE+I     +    NPA + +++S+
Sbjct:  153 SERTKKLMVEQLIEELGLKDCADTLVGDNSHRGLSGGEKRRLSIGTQMISNPSIMFLDEPTTGLDAYSAFLVIKTLKKLAKEDGRTFIMSIHQPRSDILFLLDQVCILSK-GNVVYCDKMD----NTIPYFESIG--YHVPQLVNPADYFIDLSS 300          

HSP 2 Score: 76.2554 bits (186), Expect = 3.841e-13
Identity = 34/109 (31.19%), Postives = 68/109 (62.39%), Query Frame = 1
Query:   31 EEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 354
            + ++  + LK    +++G   V G+S  +++R+T+ V+L+ +P I+ +DEPTSGLD+  +A ++  +     + G+T++ TIHQP  ++F+ F  + L+ + GR  + G
Sbjct:  815 DNLIRSLGLKHCENNIIGNEFVKGISGGEKRRVTMGVQLLNDPPILLLDEPTSGLDSFTSATILEILEKLCREQGKTIIITIHQPRSELFKRFGNVLLLAKSGRTAFNG 923          
BLAST of DY271106 vs. ExPASy Swiss-Prot
Match: ABCG2_MOUSE (ATP-binding cassette sub-family G member 2 OS=Mus musculus GN=Abcg2 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 7.990e-19
Identity = 77/264 (29.17%), Postives = 133/264 (50.38%), Query Frame = 1
Query:   28 IEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGHHSCHLISYFEAIPGVEKIKDGYNPATWMLEV-SASSQEVALGVDFCD--IYKRSELCRRNKLLIEDLSK----------------PAPGSKDLHFATQYSQSAF-SQFMACL-WKQHWSYWR---NPAYTAVRFLFTTFIALLLGSIFWDL 747
            I  +++ + L+ +  S VG   + G+S  +RKR +I +EL+ +PSI+F+DEPT+GLD+  A  V+  ++     GRT++ +IHQP   IF+ FD L L+   G+ V+ GP    +   + YF A  G    +   NPA + L+V +  S  V L  +  D    K  E  +  K +IE+LS+                  PG+++    + + +  + + F   L W    S+     NP  +  + + T  + L++G+I++DL
Sbjct:  160 INTIIKELGLEKVADSKVGTQFIRGISGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLL-ASGKLVFHGP----AQKALEYF-ASAGYH-CEPYNNPADFFLDVINGDSSAVMLNREEQDNEANKTEEPSKGEKPVIENLSEFYINSAIYGETKAELDQLPGAQEKKGTSAFKEPVYVTSFCHQLRWIARRSFKNLLGNPQASVAQLIVTVILGLIIGAIYFDL 416          
BLAST of DY271106 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.044e-18
Identity = 75/274 (27.37%), Postives = 139/274 (50.73%), Query Frame = 1
Query:    1 VNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG---------------------PLGHHSCHLISYFEAIPGVEK--IKDGYNPATWMLEVSASSQEVALGVDFCDIYKRSELCRRNKLLIEDLSKPAPGSKDLHFATQYSQSAFSQFMACLWKQHW-SYWRNPAYTAVRFLFTTFIALLLGSIFWDLG 750
            + SE R +    ++E+  L+    +++G   + G+S  +++R++IA+E++  P ++F+DEPTSGLD+ +A  V +T+R     GRTV+ +IHQPS ++FE FD L+L+  GG+ VY G                     P  H    + S F+ +    K  +K  +  +   LE   +++ + L VD+   Y  S+     K  +E++S+     K     +  SQ++F      L K+ + +  R+  Y  +R L    + + +G+I+ ++G
Sbjct:  160 LRSEKRALVERTIIEM-GLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALSRDGRTVIASIHQPSSEVFELFDRLYLLS-GGKTVYFGQASDAYEFFAQAGFPCPALRNPSDHFLRCINSDFDKVRATLKGSMKLRFEASDDPLEKITTAEAIRLLVDY---YHTSDYYYTAKAKVEEISQ----FKGTILDSGGSQASFLLQTYTLTKRSFINMSRDFGYYWLRLLIYILVTVCIGTIYLNVG 424          
BLAST of DY271106 vs. ExPASy Swiss-Prot
Match: ABCG2_HUMAN (ATP-binding cassette sub-family G member 2 OS=Homo sapiens GN=ABCG2 PE=1 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 1.363e-18
Identity = 80/300 (26.67%), Postives = 131/300 (43.67%), Query Frame = 1
Query:   28 IEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGHHSCHLISYFEAIPGVEKIKDGY------NPATWMLE----------------------VSASSQEVALGVDFCDIYKRSELCRRNKLLIEDLSKPAPGSKDLHF-ATQYSQSAFSQFMACLWKQHWSYWRNPAYTAVRFLFTTFIALLLGSIFWDLGGKTEKRQDLSNAMGSMFTALFFPRFEYCIS 840
            I  V++ + L  +  S VG   + G+S  +RKR +I +EL+ +PSI+F+DEPT+GLD+  A  V+  ++     GRT++ +IHQP   IF+ FD L L+   GR ++ GP    +   + YFE+         GY      NPA + L+                      +  S Q+  L     +IY  S   +  K  +  LS      K   F    Y+ S   Q      +   +   NP  +  + + T  + L++G+I++ L       ++ S  + +    LFF     C S
Sbjct:  161 INRVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLL-ASGRLMFHGP----AQEALGYFESA--------GYHCEAYNNPADFFLDIINGDSTAVALNREEDFKATEIIEPSKQDKPLIEKLAEIYVNSSFYKETKAELHQLSGGEKKKKITVFKEISYTTSFCHQLRWVSKRSFKNLLGNPQASIAQIIVTVVLGLVIGAIYFGL-------KNDSTGIQNRAGVLFFLTTNQCFS 440          
BLAST of DY271106 vs. ExPASy Swiss-Prot
Match: ABCG2_PIG (ATP-binding cassette sub-family G member 2 OS=Sus scrofa GN=ABCG2 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.780e-18
Identity = 74/264 (28.03%), Postives = 124/264 (46.97%), Query Frame = 1
Query:   28 IEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGHHSCHLISYFEAIPGVEKIKDGYNPATWMLEV-SASSQEVALG---------------------VD-FCDIYKRSELCRRNKLLIEDLSKPAPGSK-DLHFATQYSQSAFSQFMACLWKQHWSYWRNPAYTAVRFLFTTFIALLLGSIFWDL 747
            I  V++ + L  +  S VG   + G+S  +RKR +IA+EL+ +PSI+F+DEPT+GLD+  A  V+  ++     GRT++ +IHQP   IF+ FD L L+   GR ++ GP    +   + YF +I      +   NPA + L+V +  S  V L                      +D     Y  S   +  K+ ++  S      K  ++    Y+ S   Q      +   +   NP  +  + + T  + L++G+IF+DL
Sbjct:  161 INMVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIAMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLL-ASGRLMFHGP----AREALGYFASIG--YNCEPYNNPADFFLDVINGDSSAVVLSRADRDEGAQEPEEPPEKDTPLIDKLAAFYTNSSFFKDTKVELDQFSGGRKKKKSSVYKEVTYTTSFCHQLRWISRRSFKNLLGNPQASVAQIIVTIILGLVIGAIFYDL 417          
BLAST of DY271106 vs. ExPASy Swiss-Prot
Match: AB13G_ARATH (ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.780e-18
Identity = 49/119 (41.18%), Postives = 78/119 (65.55%), Query Frame = 1
Query:   19 KMFIEEVMELVE-------LKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 354
            K+  EE+ ++VE       L+      +G   + G+S  ++KRL+IA+E++  PS++F+DEPTSGLD+ +A  V++ +RN   +G+TVV +IHQPS ++F  FD+L L+  GG  VY G
Sbjct:  119 KLTREEISDIVEATITDMGLEECSDRTIGNWHLRGISGGEKKRLSIALEVLTKPSLLFLDEPTSGLDSASAFFVVQILRNIASSGKTVVSSIHQPSGEVFALFDDLLLLS-GGETVYFG 236          
BLAST of DY271106 vs. ExPASy Swiss-Prot
Match: WBC30_ARATH (Putative white-brown complex homolog protein 30 OS=Arabidopsis thaliana GN=WBC30 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 2.325e-18
Identity = 49/146 (33.56%), Postives = 85/146 (58.22%), Query Frame = 1
Query:   22 MFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGHHSCHLISYFEAIPGVEKIKDGYNPATWMLEV 459
            + IE V+E + L+ +R SLVG     G+S  QRKR+ + VE+V  PS++ +DEPT+GLD+ ++ +++R +R     G  +   +HQPS  +++ FD++ ++ +GG  VY     H S   I  + A  G+  + D  NP    +++
Sbjct:  579 LIIERVIESLGLQHVRDSLVGTIEKRGISGGQRKRVNVGVEMVMEPSLLILDEPTTGLDSASSQLLLRALRREALEGVNICMVVHQPSYTMYKMFDDMIILAKGGLTVY-----HGSVKKIEEYFADIGI-TVPDRVNPPDHYIDI 718          
BLAST of DY271106 vs. ExPASy Swiss-Prot
Match: PDR11_YEAST (ATP-dependent permease PDR11 OS=Saccharomyces cerevisiae GN=PDR11 PE=1 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 5.179e-18
Identity = 53/136 (38.97%), Postives = 83/136 (61.03%), Query Frame = 1
Query:   73 SLVGLPG---VNGLSTEQRKRLTIAVELVANPSII-FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGHHSCHLISYFEAIPGVEKIKDGYNPATWMLEVSAS 468
            +L+ LP    V  LS  QRK L+I VELV  PS++ F+DEPTSGLDA AA  +++ ++     G+ ++CTIHQPS  +   FD ++L+KRGG  VY G L +   + +++   +    ++    NPA ++++V  S
Sbjct:  864 NLLRLPSEKLVADLSPTQRKLLSIGVELVTKPSLLLFLDEPTSGLDAEAALTIVQFLKKLSMQGQAILCTIHQPSKSVISYFDNIYLLKRGGECVYFGSLPNACDYFVAHDRRLTFDREMD---NPADFVIDVVGS 996          
BLAST of DY271106 vs. ExPASy Swiss-Prot
Match: AB21G_ARATH (ABC transporter G family member 21 OS=Arabidopsis thaliana GN=ABCG21 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 6.764e-18
Identity = 56/153 (36.60%), Postives = 92/153 (60.13%), Query Frame = 1
Query:   13 TRKMFIEEVMELVE---LKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGHHSCHLISYFEAIPGVEKIKDGYNPATWMLEVS 462
            TRK  +E+V  +V    L     S++G   + G+S  +RKR++I  E++ NPS++ +DEPTSGLD+  AA ++ T+R+    GRTVV TIHQPS  ++  FD++ ++   G  +Y G  G     ++ YF +I G +      NPA ++L+++
Sbjct:  189 TRKEKLEQVEMVVSDLGLTRCCNSVIGGGLIRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTTAARIVATLRSLARGGRTVVTTIHQPSSRLYRMFDKVLVLSE-GCPIYSGDSG----RVMEYFGSI-GYQPGSSFVNPADFVLDLA 335          
The following BLAST results are available for this feature:
BLAST of DY271106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
WHT3_CAEEL6.118e-1927.06ABC transporter ATP-binding protein/permease wht-3... [more]
YO075_YEAST7.990e-1934.19Uncharacterized ABC transporter ATP-binding protei... [more]
ABCG2_MOUSE7.990e-1929.17ATP-binding cassette sub-family G member 2 OS=Mus ... [more]
AB11G_ARATH1.044e-1827.37ABC transporter G family member 11 OS=Arabidopsis ... [more]
ABCG2_HUMAN1.363e-1826.67ATP-binding cassette sub-family G member 2 OS=Homo... [more]
ABCG2_PIG1.780e-1828.03ATP-binding cassette sub-family G member 2 OS=Sus ... [more]
AB13G_ARATH1.780e-1841.18ABC transporter G family member 13 OS=Arabidopsis ... [more]
WBC30_ARATH2.325e-1833.56Putative white-brown complex homolog protein 30 OS... [more]
PDR11_YEAST5.179e-1838.97ATP-dependent permease PDR11 OS=Saccharomyces cere... [more]
AB21G_ARATH6.764e-1836.60ABC transporter G family member 21 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YN19FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271106 ID=DY271106; Name=DY271106; organism=Citrus clementina; type=EST; length=1139bp
GTTAATTCTGAAACCAGAAAGATGTTTATTGAGGAAGTCATGGAGCTTGT
GGAGCTGAAACCATTGAGACAGTCACTGGTTGGTTTGCCTGGTGTAAACG
GTCTGTCAACAGAGCAGCGTAAGAGACTTACCATCGCGGTTGAGCTGGTG
GCTAACCCGTCCATCATATTTATGGATGAGCCAACCTCAGGGCTGGATGC
GAGGGCTGCTGCAATTGTTATGAGAACTGTTAGAAACACAGTGGACACTG
GAAGAACAGTAGTGTGCACCATTCATCAACCAAGCATTGACATATTTGAA
GCATTTGATGAGCTATTCCTAATGAAGCGCGGGGGACGTGAAGTTTATGT
TGGGCCACTGGGTCACCATTCTTGCCATCTTATCAGCTATTTTGAAGCAA
TTCCTGGAGTCGAGAAAATTAAAGATGGTTATAATCCAGCAACTTGGATG
CTGGAAGTTTCGGCATCATCGCAAGAAGTAGCTTTGGGGGTTGATTTTTG
TGATATTTACAAACGCTCAGAGTTGTGTAGGAGAAACAAATTACTCATTG
AAGATTTAAGCAAGCCTGCTCCAGGTTCAAAGGACCTCCATTTTGCTACC
CAGTACTCTCAGTCAGCTTTCTCCCAATTTATGGCTTGCTTATGGAAGCA
ACACTGGTCATACTGGCGAAATCCAGCATACACTGCTGTTAGATTCCTTT
TTACTACTTTTATAGCATTGTTGCTGGGTTCAATTTTTTGGGACTTGGGT
GGTAAAACGGAAAAGAGGCAAGATCTGTCTAATGCAATGGGTTCCATGTT
TACTGCACTTTTCTTTCCTCGGTTTGAATATTGTATATCAGTGCACCCAG
TAATATTTTGTGAAAGGGATGGTCTTTTTAAAAAAAATACCCCGCCGGCA
TGTTTTCGGGGATTCCCTGGGCTTTTACCCAAATTTATAAATGAAATTCC
TTATGGTTTTTGTTCCCTCCATTAATTTAACTTTTTAAAAATGTAGGCCA
GAAATGGCATTTTACTGGAAACGCTGCCAAAGTTTTTTTGGGATAAATAT
TTACAATGTAATTTTCCCTTTTTTTGTTCTCTTCCCCTTTAAATTGGGAA
GGAAGGGGGGGGTGGGGTGTGGAACACCCCAACCCCCCC
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