DY271117

Overview
NameDY271117
Unique NameDY271117
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1199
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY271117 vs. ExPASy Swiss-Prot
Match: PPIL2_EMENI (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Emericella nidulans GN=cyp8 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 8.624e-11
Identity = 48/126 (38.10%), Postives = 61/126 (48.41%), Query Frame = 1 
Query:  100 AGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVE 474
            +G I +EL  +  P+   NF  L   +KG        +YK  +FHR I GFM Q            ESI+G  F DE     KH   G LSMAN G  TN SQFF+       L+ KH +FG V++
Sbjct:  319 SGDINLELHTEYAPKAVWNFIKLA--KKG--------YYKDVTFHRNIKGFMIQGGDPTGTGRGG-ESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNLKHTIFGHVID 433
The following BLAST results are available for this feature:
BLAST of DY271117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 231
Match NameE-valueIdentityDescription
PPIL2_EMENI8.624e-1138.10Peptidyl-prolyl cis-trans isomerase-like 2 OS=Emer... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YO10FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271117 ID=DY271117; Name=DY271117; organism=Citrus clementina; type=EST; length=1199bp
TCAGAAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAA
AATGCCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCCG
CCGGCAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCC
GAGAACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAAGTCCGG
CAAGCCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCCCCGGAT
TCATGTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAA
TCAATCTACGGCTCAAAATTCGCCGATGAGAACTTCGTGAAGAAGCACAC
CGGCCCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGAT
CTCAGTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCAC
GTTGTGTTCGGTCAAGTCGTCGAAGGAATGGACGTCGTCAAGGCCATCGA
GAAAGTGGGGTCCAGCTCCGGAAGGACCAACAAGCCCGTCGTGATCGCTG
ATTGCGGTCAATTGTCTTAGATTTGATCATGATAATGATCGCCATCATCA
CGAGCCGTCTGATCGCGATCGTGATGGTGATTATGTTATCTATTATTATG
TGGCCGTGTCTGTAGGACTTTTAATCTTTATCTAATTTTCCTGCTATGTT
ACTTGTTCGGGTTGGATCGGGTCTCCAGGGGGGGTTCTTGATGAACTGTT
TTTTATGTCCTTTCAAGGAACGGCCTTTTTAAATAAAAATAGGGCTTGTC
CTTGGTTAAAAAAAAAAAAAAAAAAAAAAAAACCCAACTTTTTTTGGAAC
AAATTGGGAATTAAAAAAAAAGCAATTGGGTTAACAATTTGGTTGCAACA
AAAAGGGTCCCTATCGCAGTCAAAAAAAAAATCTATTATTTTGGCCCCCC
CGGCCGAAATACCCCCTAAAGGGGAAGACCTCATAACACGAACCCATAGG
CCGATTCTCCGGGACGCGCCTCGGGCCCCGCGTCCCCCAAACAACTCCGC
AAGTCTACCCATTCAACAAAAATAAAAGAAATAAATCAACTAAATGTAAT
AAAAAAAAATCACTACGAAGAACAACCACAACTGGAGATAGCCACACAGA
TTTTCTCTTTCATTTCCCCGAAAAAATCTCACATTATTCTACATCCTCT
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