DY271174
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271174 vs. ExPASy Swiss-Prot
Match: FAD3E_BRANA (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Brassica napus GN=FAD3 PE=2 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 2.106e-62 Identity = 103/132 (78.03%), Postives = 117/132 (88.64%), Query Frame = 1 Query: 1 GLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQL 396 G+PY IFVMWLD VTYLHHHGH++KLPWYRGKEWSYLRGGLTT+DRDYG FNNIHHDIGTHVIHHLFPQIPHYHL++AT AA+ VLG+YYREPK SG IP +L L+ S+ KDHYVSD GD+V+Y+TDP L Sbjct: 241 GVPYIIFVMWLDAVTYLHHHGHDEKLPWYRGKEWSYLRGGLTTIDRDYGIFNNIHHDIGTHVIHHLFPQIPHYHLVDATRAAKHVLGRYYREPKTSGAIPIHLVESLVASIKKDHYVSDTGDIVFYETDPDL 372
BLAST of DY271174 vs. ExPASy Swiss-Prot
Match: FD6E2_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 OS=Glycine max GN=FAD2-2 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 7.579e-20 Identity = 46/92 (50.00%), Postives = 61/92 (66.30%), Query Frame = 1 Query: 1 GLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDI-GTHVIHHLFPQIPHYHLIEATEAARPVLGKYYR 273 G+P + +L L+T+L H LP Y EW +LRG L T+DRDYG N + H+I THV HHLF +PHYH +EAT+A +P+LG+YYR Sbjct: 256 GVPLLVVNGFLVLITFLQHT--HPALPHYTSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYR 345
BLAST of DY271174 vs. ExPASy Swiss-Prot
Match: FAD6E_BRAJU (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Brassica juncea PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.688e-19 Identity = 46/92 (50.00%), Postives = 59/92 (64.13%), Query Frame = 1 Query: 1 GLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDI-GTHVIHHLFPQIPHYHLIEATEAARPVLGKYYR 273 G+P I +L L+TYL H LP Y EW +LRG L T+DRDYG N + H+I THV HHLF +PHYH +E T+A +P+LG YY+ Sbjct: 257 GVPLLIVNAFLVLITYLQHT--HPSLPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEVTKAIKPILGDYYQ 346
BLAST of DY271174 vs. ExPASy Swiss-Prot
Match: FAD12_CREAL (Delta(12) fatty acid dehydrogenase OS=Crepis alpina PE=2 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 2.880e-19 Identity = 44/92 (47.83%), Postives = 62/92 (67.39%), Query Frame = 1 Query: 1 GLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIG-THVIHHLFPQIPHYHLIEATEAARPVLGKYYR 273 G+P ++ D++TYLHH LP Y EW++LRG L+T+DRD+G+ N++ HD+ THV+HHLF IPHYH EA +A VLG +Y+ Sbjct: 249 GIPVLGVFIFFDIITYLHHT--HLSLPHYDSSEWNWLRGALSTIDRDFGFLNSVLHDVTHTHVMHHLFSYIPHYHAKEARDAINTVLGDFYK 338
BLAST of DY271174 vs. ExPASy Swiss-Prot
Match: FAD6E_ARATH (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD2 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.761e-19 Identity = 46/92 (50.00%), Postives = 60/92 (65.22%), Query Frame = 1 Query: 1 GLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDI-GTHVIHHLFPQIPHYHLIEATEAARPVLGKYYR 273 G+P I +L L+TYL H LP Y EW +LRG L T+DRDYG N + H+I THV HHLF +PHY+ +EAT+A +P+LG YY+ Sbjct: 256 GVPLLIVNAFLVLITYLQHT--HPSLPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYNAMEATKAIKPILGDYYQ 345
BLAST of DY271174 vs. ExPASy Swiss-Prot
Match: FD6E1_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max GN=FAD2-1 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.094e-18 Identity = 45/92 (48.91%), Postives = 58/92 (63.04%), Query Frame = 1 Query: 1 GLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNI-HHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYR 273 G+P I +L +TYL H LP Y EW +L+G L T+DRDYG N + HH THV HHLF +PHYH +EAT A +P+LG+YY+ Sbjct: 260 GVPLLIVNGFLVTITYLQHTHFA--LPHYDSSEWDWLKGALATMDRDYGILNKVFHHITDTHVAHHLFSTMPHYHAMEATNAIKPILGEYYQ 349
BLAST of DY271174 vs. ExPASy Swiss-Prot
Match: FAD12_MORIS (Delta(12) fatty acid desaturase OS=Mortierella isabellina PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.580e-17 Identity = 50/128 (39.06%), Postives = 72/128 (56.25%), Query Frame = 1 Query: 4 LPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWF--NNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQ 381 +PY WL L+T+L H + KLP YR W++ RG L T+DR +G F + H + THV HHLF Q+P YH EAT + +LG+YY P + + RS + +V D+GDVV+++ Sbjct: 280 IPYLFVNFWLVLITFLQHT--DPKLPHYREGAWNFQRGALCTVDRSFGKFLDHMFHGIVHTHVAHHLFSQMPFYHAEEATYHLKKLLGEYYVYD------PSPIVVAVWRSFRECRFVEDHGDVVFFK 399
BLAST of DY271174 vs. ExPASy Swiss-Prot
Match: FAD12_MORAP (Delta(12) fatty acid desaturase OS=Mortierella alpina PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 2.064e-17 Identity = 50/128 (39.06%), Postives = 72/128 (56.25%), Query Frame = 1 Query: 4 LPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWF--NNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQ 381 +PY WL L+T+L H + KLP YR W++ RG L T+DR +G F + H + THV HHLF Q+P YH EAT + +LG+YY P + + RS + +V D+GDVV+++ Sbjct: 280 VPYLFVNFWLVLITFLQHT--DPKLPHYREGAWNFQRGALCTVDRSFGKFLDHMFHGIVHTHVAHHLFSQMPFYHAEEATYHLKKLLGEYYVYD------PSPIVVAVWRSFRECRFVEDHGDVVFFK 399 The following BLAST results are available for this feature:
BLAST of DY271174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271174 ID=DY271174; Name=DY271174; organism=Citrus clementina; type=EST; length=974bpback to top |