DY271178

Overview
NameDY271178
Unique NameDY271178
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1058
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: PAK3_HUMAN (Serine/threonine-protein kinase PAK 3 OS=Homo sapiens GN=PAK3 PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 6.312e-23
Identity = 74/217 (34.10%), Postives = 114/217 (52.53%), Query Frame = 3
Query:   27 WVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYL-----GDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRRECQGPESDVWSLGCTNIEKGYGKP 662
            + R + IG+G+ GTV  A+D   G   A+K ++         P  + E + NEI ++R   +P IV YL     GD++             + +EYL GG+++D+ T      DE  + +     + AL +LHS  ++H D+K  N+L+G + S VKL DFG   + T   ++   +   G+P WMAPEVV R+  GP+ D+WSLG   IE   G+P
Sbjct:  283 YTRFEKIGQGASGTVYTALDIATGQEVAIKQMN-----LQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELW------------VVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGS-VKLTDFGFCAQITPEQSKRSTMV--GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEP 475          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: PAK2_RAT (Serine/threonine-protein kinase PAK 2 OS=Rattus norvegicus GN=Pak2 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 8.244e-23
Identity = 73/217 (33.64%), Postives = 114/217 (52.53%), Query Frame = 3
Query:   27 WVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYL-----GDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRRECQGPESDVWSLGCTNIEKGYGKP 662
            + R + IG+G+ GTV  A D   G   A+K ++         P  + E + NEI +++ L +P IV +L     GD++             + +EYL GG+++D+ T      DE  + +     + AL++LH+  ++H D+K  NVL+G   S VKL DFG   + T   ++   +   G+P WMAPEVV R+  GP+ D+WSLG   IE   G+P
Sbjct:  249 YTRYEKIGQGASGTVFTATDVALGQEVAIKQIN-----LQKQP--KKELIINEILVMKELKNPNIVNFLDSYLVGDELF------------VVMEYLAGGSLTDVVT--ETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMEGS-VKLTDFGFCAQITPEQSKRSTMV--GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEP 441          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: PAK2_RABIT (Serine/threonine-protein kinase PAK 2 OS=Oryctolagus cuniculus GN=PAK2 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 8.244e-23
Identity = 73/217 (33.64%), Postives = 114/217 (52.53%), Query Frame = 3
Query:   27 WVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYL-----GDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRRECQGPESDVWSLGCTNIEKGYGKP 662
            + R + IG+G+ GTV  A D   G   A+K ++         P  + E + NEI +++ L +P IV +L     GD++             + +EYL GG+++D+ T      DE  + +     + AL++LH+  ++H D+K  NVL+G   S VKL DFG   + T   ++   +   G+P WMAPEVV R+  GP+ D+WSLG   IE   G+P
Sbjct:  249 YTRYEKIGQGASGTVFTATDVALGQEVAIKQIN-----LQKQP--KKELIINEILVMKELKNPNIVNFLDSYLVGDELF------------VVMEYLAGGSLTDVVT--ETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMEGS-VKLTDFGFCAQITPEQSKRSTMV--GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEP 441          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: PAK2_MOUSE (Serine/threonine-protein kinase PAK 2 OS=Mus musculus GN=Pak2 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 8.244e-23
Identity = 73/217 (33.64%), Postives = 114/217 (52.53%), Query Frame = 3
Query:   27 WVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYL-----GDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRRECQGPESDVWSLGCTNIEKGYGKP 662
            + R + IG+G+ GTV  A D   G   A+K ++         P  + E + NEI +++ L +P IV +L     GD++             + +EYL GG+++D+ T      DE  + +     + AL++LH+  ++H D+K  NVL+G   S VKL DFG   + T   ++   +   G+P WMAPEVV R+  GP+ D+WSLG   IE   G+P
Sbjct:  249 YTRYEKIGQGASGTVFTATDVALGQEVAIKQIN-----LQKQP--KKELIINEILVMKELKNPNIVNFLDSYLVGDELF------------VVMEYLAGGSLTDVVT--ETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMEGS-VKLTDFGFCAQITPEQSKRSTMV--GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEP 441          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: PAK2_HUMAN (Serine/threonine-protein kinase PAK 2 OS=Homo sapiens GN=PAK2 PE=1 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 8.244e-23
Identity = 73/217 (33.64%), Postives = 114/217 (52.53%), Query Frame = 3
Query:   27 WVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYL-----GDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRRECQGPESDVWSLGCTNIEKGYGKP 662
            + R + IG+G+ GTV  A D   G   A+K ++         P  + E + NEI +++ L +P IV +L     GD++             + +EYL GG+++D+ T      DE  + +     + AL++LH+  ++H D+K  NVL+G   S VKL DFG   + T   ++   +   G+P WMAPEVV R+  GP+ D+WSLG   IE   G+P
Sbjct:  249 YTRYEKIGQGASGTVFTATDVALGQEVAIKQIN-----LQKQP--KKELIINEILVMKELKNPNIVNFLDSYLVGDELF------------VVMEYLAGGSLTDVVT--ETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMEGS-VKLTDFGFCAQITPEQSKRSTMV--GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEP 441          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: PAK1_MOUSE (Serine/threonine-protein kinase PAK 1 OS=Mus musculus GN=Pak1 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 8.244e-23
Identity = 73/211 (34.60%), Postives = 112/211 (53.08%), Query Frame = 3
Query:   45 IGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYL-----GDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRRECQGPESDVWSLGCTNIEKGYGKP 662
            IG+G+ GTV  A+D   G   A+K ++         P  + E + NEI ++R   +P IV YL     GD++             + +EYL GG+++D+ T      DE  + +     + AL++LHS  ++H D+K  N+L+G + S VKL DFG   + T   ++   +   G+P WMAPEVV R+  GP+ D+WSLG   IE   G+P
Sbjct:  276 IGQGASGTVYTAMDVATGQEVAIKQMN-----LQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELW------------VVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS-VKLTDFGFCAQITPEQSKRSTMV--GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 462          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: BCK1_YEAST (Serine/threonine-protein kinase BCK1/SLK1/SSP31 OS=Saccharomyces cerevisiae GN=BCK1 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.836e-22
Identity = 71/227 (31.28%), Postives = 119/227 (52.42%), Query Frame = 3
Query:   15 KMVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSVD------RNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVV-RRECQGPESDVWSLGCTNIEKGYGKPRWED 674
            K  +W++G+ IG+GSFG V + ++   G++ AVK V+      +N A+         E L +E+  L+ L    IV+YLG +         ++  +L LEY+ GG+V  L      + DE  ++  T  ++  L YLHS+ I+H D+K  N+L+       K++DFG + ++    +    +  RG+  WMAPE+V  ++    + D+WSLGC  +E   GK  W +
Sbjct: 1171 KEFAWMKGEMIGKGSFGAVYLCLNVTTGEMMAVKQVEVPKYSSQNEAILS-----TVEALRSEVSTLKDLDHLNIVQYLGFE-------NKNNIYSLFLEYVAGGSVGSLIRMYGRF-DEPLIKHLTTQVLKGLAYLHSKGILHRDMKADNLLL-DQDGICKISDFGISRKSKDIYSNS-DMTMRGTVFWMAPEMVDTKQGYSAKVDIWSLGCIVLEMFAGKRPWSN 1382          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: STK4_CHICK (Serine/threonine-protein kinase 4 OS=Gallus gallus GN=STK4 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.399e-22
Identity = 76/225 (33.78%), Postives = 110/225 (48.89%), Query Frame = 3
Query:   45 IGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRRECQGPESDVWSLGCTNIEKGYGKPRWED---FRANTLNPTRFP 710
            +G GS+G+V  A+ +  G V A+K V   + L         + +  EI I++   SP++VKY G   SY   T       + +EY   G+VSD+    N    E  + +     +  L+YLH    +H D+K  N+L+       KLADFG AG+ T  DT   +    G+P WMAP V++       +D+WSLG T IE   GKP + D    RA  + PT  P
Sbjct:   35 LGEGSYGSVFKAIHKETGQVVAIKQVPVESDL---------QEIIKEISIMQQCDSPHVVKYYG---SYFKNTDLW----IVMEYCGAGSVSDIIRLRNKTLTEEEIATIVQSTLKGLEYLHFMRKIHRDIKAGNILLN-TEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPGVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPP 240          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: PAKG_DICDI (Serine/threonine-protein kinase pakG OS=Dictyostelium discoideum GN=pakG PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 4.091e-22
Identity = 75/231 (32.47%), Postives = 109/231 (47.19%), Query Frame = 3
Query:   45 IGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHL--EYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRRECQGPESDVWSLGCTNIEKGYGKPRWEDFRANTLNPTRFPQYLPRFP 731
            +G GS+GTV  A+ +    V A+KS+          P  ++E +E EI IL+   S  IV Y G     +         NL +  EY    ++ D+         E  +       +  L YLH  NI+H D+K  N+L+  ++  VKLADFG + +   S  RG   Q  G+PLWMAPE+++R+    + D+WSLG T IE     P        T+ PTR    +P  P
Sbjct:  145 LGTGSYGTVYKAIHKDTNFVLAIKSI----------PIKESEEIEKEISILKKCKSQNIVSYFGSGQQGD---------NLWILMEYCSANSIRDMLELTEKSLTEKQISVILQQALKGLHYLHQSNIIHRDIKAANILINEDA-IVKLADFGVSSQLEDS-LRGEASQLVGTPLWMAPEIIKRQNYNNKCDIWSLGITAIEMAESFP-----PLYTMPPTRAMLMIPNKP 349          
BLAST of DY271178 vs. ExPASy Swiss-Prot
Match: STK4_AOTNA (Serine/threonine-protein kinase 4 OS=Aotus nancymaae GN=STK4 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 5.343e-22
Identity = 75/225 (33.33%), Postives = 110/225 (48.89%), Query Frame = 3
Query:   45 IGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWMAPEVVRRECQGPESDVWSLGCTNIEKGYGKPRWED---FRANTLNPTRFP 710
            +G GS+G+V  A+ +  G + A+K V   + L         + +  EI I++   S ++VKY G   SY   T       + +EY   G+VSD+    N    E  + +     +  L+YLH    +H D+K  N+L+       KLADFG AG+ T  DT   +    G+P WMAPEV++       +D+WSLG T IE   GKP + D    RA  + PT  P
Sbjct:   36 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDL---------QEIIKEISIMQQCDSHHVVKYYG---SYFKNTDLW----IVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLN-TEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPP 241          
The following BLAST results are available for this feature:
BLAST of DY271178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PAK3_HUMAN6.312e-2334.10Serine/threonine-protein kinase PAK 3 OS=Homo sapi... [more]
PAK2_RAT8.244e-2333.64Serine/threonine-protein kinase PAK 2 OS=Rattus no... [more]
PAK2_RABIT8.244e-2333.64Serine/threonine-protein kinase PAK 2 OS=Oryctolag... [more]
PAK2_MOUSE8.244e-2333.64Serine/threonine-protein kinase PAK 2 OS=Mus muscu... [more]
PAK2_HUMAN8.244e-2333.64Serine/threonine-protein kinase PAK 2 OS=Homo sapi... [more]
PAK1_MOUSE8.244e-2334.60Serine/threonine-protein kinase PAK 1 OS=Mus muscu... [more]
BCK1_YEAST1.836e-2231.28Serine/threonine-protein kinase BCK1/SLK1/SSP31 OS... [more]
STK4_CHICK2.399e-2233.78Serine/threonine-protein kinase 4 OS=Gallus gallus... [more]
PAKG_DICDI4.091e-2232.47Serine/threonine-protein kinase pakG OS=Dictyostel... [more]
STK4_AOTNA5.343e-2233.33Serine/threonine-protein kinase 4 OS=Aotus nancyma... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YB14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271178 ID=DY271178; Name=DY271178; organism=Citrus clementina; type=EST; length=1058bp
GCATTTATTAAAAAAAAATGGTTTCTTGGGTGAGAGGCAAGTGCATAGGC
AGAGGCTCCTTTGGAACCGTCAACGTGGCCGTCGACAGATTCAACGGCGA
CGTTTTTGCGGTGAAATCAGTTGATCGAAACGCCGCGTTGTGTCACCATA
TGCCAGCAATTCAAGCCGAGTGTTTAGAAAACGAAATCAGAATTCTCCGC
TCACTCTCCTCCCCTTACATTGTCAAGTACCTCGGCGACGACGTGTCATA
CGAGGCCCCCACGACGTCGTCCTCGTGCCGGAACCTCCACCTAGAGTACT
TGCCAGGCGGCACCGTCTCCGACCTGGCAACAACTCTTAATGCTTACGCG
GACGAGATCACCTTGCGTTCACACACGTACTGTATTGTCTCTGCGTTGAA
GTACTTGCATTCTAGGAACATCGTACACTGCGACGTCAAAGGCAAGAACG
TACTAGTGGGTCCCAATTCGAGTTTCGTTAAACTCGCCGATTTCGGCGCA
GCGGGTGAGGCGACGGTTTCTGACACACGGGGTGTCAAGATTCAGCCGCG
TGGAAGTCCTCTATGGATGGCGCCCGAGGTCGTACGAAGGGAGTGTCAGG
GACCGGAGAGTGATGTCTGGTCTTTGGGATGTACCAATATCGAGAAGGGT
TACGGAAAACCCCGCTGGGAAGATTTCCGTGCCAACACCCTGAATCCAAC
CCGATTCCCCCAATATTTGCCCCGGTTTCCCATTCAGCCTTCGAACTCGT
GCTGGATTTTCTTGAAAATTGTTTGAAAAAGGGACCGGGGGAGGCCGGGG
AACTGGAACACCCCCCCAAAACTTCCCTTTTTAACAATCGGGGTCCCCCA
ACGGAGGCAAAAAAGCCGCGGAACCCCCCCCCCGGGCGCTGCCCCGGGGC
CACATCCCAAATCCAGAAAAAAAGGGAACAATGGAATAACAATAAAAAGG
TCTTCCCCCAAGAAGAAAGGGAGGCAAAATTCGTCTGGTCATGGGGACGG
TTCTATGGCAACAAACAGGGCCTGGCCGGCCAACAAAAAGCGAATAAACA
GCACCGGG
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